data_3GOS # _model_server_result.job_id V6orFqfXjtxK2UrK0XjBhg _model_server_result.datetime_utc '2024-12-06 07:48:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3gos # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":275}' # _entry.id 3GOS # _exptl.entry_id 3GOS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 105.28 _cell.angle_gamma 90 _cell.entry_id 3GOS _cell.length_a 57.792 _cell.length_b 69.695 _cell.length_c 106.448 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3GOS _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 D MG MG . A MG 275 1_555 E O HOH . A HOH 346 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? metalc ? metalc2 D MG MG . A MG 275 1_555 E O HOH . A HOH 380 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.181 ? metalc ? metalc3 D MG MG . A MG 275 1_555 F O HOH . B HOH 293 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? metalc ? metalc4 D MG MG . A MG 275 1_555 G O HOH . C HOH 284 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? metalc ? metalc5 D MG MG . A MG 275 1_555 G O HOH . C HOH 317 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.171 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3GOS _atom_sites.fract_transf_matrix[1][1] 0.017303 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004727 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014348 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009739 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 MG A 1 275 1 MG MG . E 3 HOH A 1 276 1 HOH HOH . E 3 HOH A 2 277 2 HOH HOH . E 3 HOH A 3 278 5 HOH HOH . E 3 HOH A 4 279 6 HOH HOH . E 3 HOH A 5 280 7 HOH HOH . E 3 HOH A 6 281 281 HOH HOH . E 3 HOH A 7 282 9 HOH HOH . E 3 HOH A 8 283 283 HOH HOH . E 3 HOH A 9 284 18 HOH HOH . E 3 HOH A 10 285 28 HOH HOH . E 3 HOH A 11 286 30 HOH HOH . E 3 HOH A 12 287 31 HOH HOH . E 3 HOH A 13 288 34 HOH HOH . E 3 HOH A 14 289 38 HOH HOH . E 3 HOH A 15 290 42 HOH HOH . E 3 HOH A 16 291 43 HOH HOH . E 3 HOH A 17 292 44 HOH HOH . E 3 HOH A 18 293 51 HOH HOH . E 3 HOH A 19 294 54 HOH HOH . E 3 HOH A 20 295 57 HOH HOH . E 3 HOH A 21 296 60 HOH HOH . E 3 HOH A 22 297 62 HOH HOH . E 3 HOH A 23 298 67 HOH HOH . E 3 HOH A 24 299 69 HOH HOH . E 3 HOH A 25 300 70 HOH HOH . E 3 HOH A 26 301 72 HOH HOH . E 3 HOH A 27 302 73 HOH HOH . E 3 HOH A 28 303 74 HOH HOH . E 3 HOH A 29 304 75 HOH HOH . E 3 HOH A 30 305 77 HOH HOH . E 3 HOH A 31 306 83 HOH HOH . E 3 HOH A 32 307 85 HOH HOH . E 3 HOH A 33 308 86 HOH HOH . E 3 HOH A 34 309 88 HOH HOH . E 3 HOH A 35 310 89 HOH HOH . E 3 HOH A 36 311 90 HOH HOH . E 3 HOH A 37 312 92 HOH HOH . E 3 HOH A 38 313 93 HOH HOH . E 3 HOH A 39 314 95 HOH HOH . E 3 HOH A 40 315 101 HOH HOH . E 3 HOH A 41 316 102 HOH HOH . E 3 HOH A 42 317 103 HOH HOH . E 3 HOH A 43 318 104 HOH HOH . E 3 HOH A 44 319 118 HOH HOH . E 3 HOH A 45 320 119 HOH HOH . E 3 HOH A 46 321 120 HOH HOH . E 3 HOH A 47 322 121 HOH HOH . E 3 HOH A 48 323 122 HOH HOH . E 3 HOH A 49 324 124 HOH HOH . E 3 HOH A 50 325 127 HOH HOH . E 3 HOH A 51 326 133 HOH HOH . E 3 HOH A 52 327 134 HOH HOH . E 3 HOH A 53 328 135 HOH HOH . E 3 HOH A 54 329 136 HOH HOH . E 3 HOH A 55 330 139 HOH HOH . E 3 HOH A 56 331 147 HOH HOH . E 3 HOH A 57 332 149 HOH HOH . E 3 HOH A 58 333 150 HOH HOH . E 3 HOH A 59 334 152 HOH HOH . E 3 HOH A 60 335 153 HOH HOH . E 3 HOH A 61 336 154 HOH HOH . E 3 HOH A 62 337 160 HOH HOH . E 3 HOH A 63 338 162 HOH HOH . E 3 HOH A 64 339 166 HOH HOH . E 3 HOH A 65 340 167 HOH HOH . E 3 HOH A 66 341 168 HOH HOH . E 3 HOH A 67 342 170 HOH HOH . E 3 HOH A 68 343 172 HOH HOH . E 3 HOH A 69 344 173 HOH HOH . E 3 HOH A 70 345 175 HOH HOH . E 3 HOH A 71 346 176 HOH HOH . E 3 HOH A 72 347 181 HOH HOH . E 3 HOH A 73 348 183 HOH HOH . E 3 HOH A 74 349 185 HOH HOH . E 3 HOH A 75 350 187 HOH HOH . E 3 HOH A 76 351 194 HOH HOH . E 3 HOH A 77 352 195 HOH HOH . E 3 HOH A 78 353 196 HOH HOH . E 3 HOH A 79 354 198 HOH HOH . E 3 HOH A 80 355 202 HOH HOH . E 3 HOH A 81 356 206 HOH HOH . E 3 HOH A 82 357 210 HOH HOH . E 3 HOH A 83 358 211 HOH HOH . E 3 HOH A 84 359 217 HOH HOH . E 3 HOH A 85 360 220 HOH HOH . E 3 HOH A 86 361 221 HOH HOH . E 3 HOH A 87 362 225 HOH HOH . E 3 HOH A 88 363 226 HOH HOH . E 3 HOH A 89 364 227 HOH HOH . E 3 HOH A 90 365 229 HOH HOH . E 3 HOH A 91 366 231 HOH HOH . E 3 HOH A 92 367 232 HOH HOH . E 3 HOH A 93 368 233 HOH HOH . E 3 HOH A 94 369 235 HOH HOH . E 3 HOH A 95 370 239 HOH HOH . E 3 HOH A 96 371 242 HOH HOH . E 3 HOH A 97 372 243 HOH HOH . E 3 HOH A 98 373 246 HOH HOH . E 3 HOH A 99 374 247 HOH HOH . E 3 HOH A 100 375 249 HOH HOH . E 3 HOH A 101 376 251 HOH HOH . E 3 HOH A 102 377 254 HOH HOH . E 3 HOH A 103 378 255 HOH HOH . E 3 HOH A 104 379 258 HOH HOH . E 3 HOH A 105 380 262 HOH HOH . E 3 HOH A 106 381 265 HOH HOH . E 3 HOH A 107 382 269 HOH HOH . F 3 HOH B 1 275 275 HOH HOH . F 3 HOH B 2 276 276 HOH HOH . F 3 HOH B 3 277 277 HOH HOH . F 3 HOH B 4 278 278 HOH HOH . F 3 HOH B 5 279 279 HOH HOH . F 3 HOH B 6 280 4 HOH HOH . F 3 HOH B 7 281 11 HOH HOH . F 3 HOH B 8 282 12 HOH HOH . F 3 HOH B 9 283 13 HOH HOH . F 3 HOH B 10 284 14 HOH HOH . F 3 HOH B 11 285 15 HOH HOH . F 3 HOH B 12 286 16 HOH HOH . F 3 HOH B 13 287 21 HOH HOH . F 3 HOH B 14 288 22 HOH HOH . F 3 HOH B 15 289 26 HOH HOH . F 3 HOH B 16 290 27 HOH HOH . F 3 HOH B 17 291 32 HOH HOH . F 3 HOH B 18 292 36 HOH HOH . F 3 HOH B 19 293 37 HOH HOH . F 3 HOH B 20 294 39 HOH HOH . F 3 HOH B 21 295 40 HOH HOH . F 3 HOH B 22 296 45 HOH HOH . F 3 HOH B 23 297 46 HOH HOH . F 3 HOH B 24 298 47 HOH HOH . F 3 HOH B 25 299 50 HOH HOH . F 3 HOH B 26 300 53 HOH HOH . F 3 HOH B 27 301 55 HOH HOH . F 3 HOH B 28 302 58 HOH HOH . F 3 HOH B 29 303 61 HOH HOH . F 3 HOH B 30 304 63 HOH HOH . F 3 HOH B 31 305 64 HOH HOH . F 3 HOH B 32 306 65 HOH HOH . F 3 HOH B 33 307 66 HOH HOH . F 3 HOH B 34 308 68 HOH HOH . F 3 HOH B 35 309 80 HOH HOH . F 3 HOH B 36 310 81 HOH HOH . F 3 HOH B 37 311 84 HOH HOH . F 3 HOH B 38 312 91 HOH HOH . F 3 HOH B 39 313 97 HOH HOH . F 3 HOH B 40 314 98 HOH HOH . F 3 HOH B 41 315 105 HOH HOH . F 3 HOH B 42 316 106 HOH HOH . F 3 HOH B 43 317 109 HOH HOH . F 3 HOH B 44 318 110 HOH HOH . F 3 HOH B 45 319 112 HOH HOH . F 3 HOH B 46 320 113 HOH HOH . F 3 HOH B 47 321 130 HOH HOH . F 3 HOH B 48 322 132 HOH HOH . F 3 HOH B 49 323 140 HOH HOH . F 3 HOH B 50 324 142 HOH HOH . F 3 HOH B 51 325 143 HOH HOH . F 3 HOH B 52 326 145 HOH HOH . F 3 HOH B 53 327 151 HOH HOH . F 3 HOH B 54 328 155 HOH HOH . F 3 HOH B 55 329 161 HOH HOH . F 3 HOH B 56 330 164 HOH HOH . F 3 HOH B 57 331 174 HOH HOH . F 3 HOH B 58 332 180 HOH HOH . F 3 HOH B 59 333 182 HOH HOH . F 3 HOH B 60 334 184 HOH HOH . F 3 HOH B 61 335 186 HOH HOH . F 3 HOH B 62 336 189 HOH HOH . F 3 HOH B 63 337 192 HOH HOH . F 3 HOH B 64 338 193 HOH HOH . F 3 HOH B 65 339 199 HOH HOH . F 3 HOH B 66 340 201 HOH HOH . F 3 HOH B 67 341 204 HOH HOH . F 3 HOH B 68 342 205 HOH HOH . F 3 HOH B 69 343 207 HOH HOH . F 3 HOH B 70 344 209 HOH HOH . F 3 HOH B 71 345 214 HOH HOH . F 3 HOH B 72 346 215 HOH HOH . F 3 HOH B 73 347 218 HOH HOH . F 3 HOH B 74 348 219 HOH HOH . F 3 HOH B 75 349 224 HOH HOH . F 3 HOH B 76 350 228 HOH HOH . F 3 HOH B 77 351 230 HOH HOH . F 3 HOH B 78 352 234 HOH HOH . F 3 HOH B 79 353 238 HOH HOH . F 3 HOH B 80 354 240 HOH HOH . F 3 HOH B 81 355 248 HOH HOH . F 3 HOH B 82 356 252 HOH HOH . F 3 HOH B 83 357 257 HOH HOH . F 3 HOH B 84 358 264 HOH HOH . F 3 HOH B 85 359 266 HOH HOH . F 3 HOH B 86 360 267 HOH HOH . F 3 HOH B 87 361 270 HOH HOH . F 3 HOH B 88 362 271 HOH HOH . F 3 HOH B 89 363 274 HOH HOH . G 3 HOH C 1 275 3 HOH HOH . G 3 HOH C 2 276 8 HOH HOH . G 3 HOH C 3 277 10 HOH HOH . G 3 HOH C 4 278 17 HOH HOH . G 3 HOH C 5 279 19 HOH HOH . G 3 HOH C 6 280 280 HOH HOH . G 3 HOH C 7 281 20 HOH HOH . G 3 HOH C 8 282 282 HOH HOH . G 3 HOH C 9 283 23 HOH HOH . G 3 HOH C 10 284 284 HOH HOH . G 3 HOH C 11 285 285 HOH HOH . G 3 HOH C 12 286 24 HOH HOH . G 3 HOH C 13 287 25 HOH HOH . G 3 HOH C 14 288 29 HOH HOH . G 3 HOH C 15 289 33 HOH HOH . G 3 HOH C 16 290 35 HOH HOH . G 3 HOH C 17 291 41 HOH HOH . G 3 HOH C 18 292 48 HOH HOH . G 3 HOH C 19 293 49 HOH HOH . G 3 HOH C 20 294 52 HOH HOH . G 3 HOH C 21 295 56 HOH HOH . G 3 HOH C 22 296 59 HOH HOH . G 3 HOH C 23 297 71 HOH HOH . G 3 HOH C 24 298 76 HOH HOH . G 3 HOH C 25 299 78 HOH HOH . G 3 HOH C 26 300 79 HOH HOH . G 3 HOH C 27 301 82 HOH HOH . G 3 HOH C 28 302 87 HOH HOH . G 3 HOH C 29 303 94 HOH HOH . G 3 HOH C 30 304 96 HOH HOH . G 3 HOH C 31 305 99 HOH HOH . G 3 HOH C 32 306 100 HOH HOH . G 3 HOH C 33 307 107 HOH HOH . G 3 HOH C 34 308 108 HOH HOH . G 3 HOH C 35 309 111 HOH HOH . G 3 HOH C 36 310 114 HOH HOH . G 3 HOH C 37 311 115 HOH HOH . G 3 HOH C 38 312 116 HOH HOH . G 3 HOH C 39 313 117 HOH HOH . G 3 HOH C 40 314 123 HOH HOH . G 3 HOH C 41 315 125 HOH HOH . G 3 HOH C 42 316 126 HOH HOH . G 3 HOH C 43 317 128 HOH HOH . G 3 HOH C 44 318 129 HOH HOH . G 3 HOH C 45 319 131 HOH HOH . G 3 HOH C 46 320 137 HOH HOH . G 3 HOH C 47 321 138 HOH HOH . G 3 HOH C 48 322 141 HOH HOH . G 3 HOH C 49 323 144 HOH HOH . G 3 HOH C 50 324 146 HOH HOH . G 3 HOH C 51 325 148 HOH HOH . G 3 HOH C 52 326 156 HOH HOH . G 3 HOH C 53 327 157 HOH HOH . G 3 HOH C 54 328 158 HOH HOH . G 3 HOH C 55 329 159 HOH HOH . G 3 HOH C 56 330 163 HOH HOH . G 3 HOH C 57 331 165 HOH HOH . G 3 HOH C 58 332 169 HOH HOH . G 3 HOH C 59 333 171 HOH HOH . G 3 HOH C 60 334 177 HOH HOH . G 3 HOH C 61 335 178 HOH HOH . G 3 HOH C 62 336 179 HOH HOH . G 3 HOH C 63 337 188 HOH HOH . G 3 HOH C 64 338 190 HOH HOH . G 3 HOH C 65 339 191 HOH HOH . G 3 HOH C 66 340 197 HOH HOH . G 3 HOH C 67 341 200 HOH HOH . G 3 HOH C 68 342 203 HOH HOH . G 3 HOH C 69 343 208 HOH HOH . G 3 HOH C 70 344 212 HOH HOH . G 3 HOH C 71 345 213 HOH HOH . G 3 HOH C 72 346 216 HOH HOH . G 3 HOH C 73 347 222 HOH HOH . G 3 HOH C 74 348 223 HOH HOH . G 3 HOH C 75 349 236 HOH HOH . G 3 HOH C 76 350 237 HOH HOH . G 3 HOH C 77 351 241 HOH HOH . G 3 HOH C 78 352 244 HOH HOH . G 3 HOH C 79 353 245 HOH HOH . G 3 HOH C 80 354 250 HOH HOH . G 3 HOH C 81 355 253 HOH HOH . G 3 HOH C 82 356 256 HOH HOH . G 3 HOH C 83 357 259 HOH HOH . G 3 HOH C 84 358 260 HOH HOH . G 3 HOH C 85 359 261 HOH HOH . G 3 HOH C 86 360 263 HOH HOH . G 3 HOH C 87 361 268 HOH HOH . G 3 HOH C 88 362 272 HOH HOH . G 3 HOH C 89 363 273 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x -39.807 _atom_site.Cartn_y 3.534 _atom_site.Cartn_z 13.362 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 21.71 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 275 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 30 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #