data_3GP0
#
_model_server_result.job_id            -OZZjzSbZtmFRCFFGw8XAQ 
_model_server_result.datetime_utc      '2024-11-12 23:31:39' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3gp0 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":351}' 
#
_entry.id    3GP0 
#
_exptl.entry_id    3GP0 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3GP0 
_cell.length_a            38.94 
_cell.length_b            60.08 
_cell.length_c            148.55 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3GP0 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     3GP0 
_atom_sites.fract_transf_matrix[1][1]    0.025681 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016644 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006732 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NIL A 1 1 1 NIL NIL . 
C 3 EDO A 1 351 1 EDO EDO . 
D 4 CL A 1 352 1 CL CL . 
E 5 HOH A 1 2 2 HOH HOH . 
E 5 HOH A 2 353 1 HOH HOH . 
E 5 HOH A 3 354 3 HOH HOH . 
E 5 HOH A 4 355 4 HOH HOH . 
E 5 HOH A 5 356 5 HOH HOH . 
E 5 HOH A 6 357 6 HOH HOH . 
E 5 HOH A 7 358 7 HOH HOH . 
E 5 HOH A 8 359 8 HOH HOH . 
E 5 HOH A 9 360 9 HOH HOH . 
E 5 HOH A 10 361 10 HOH HOH . 
E 5 HOH A 11 362 11 HOH HOH . 
E 5 HOH A 12 363 12 HOH HOH . 
E 5 HOH A 13 364 13 HOH HOH . 
E 5 HOH A 14 365 14 HOH HOH . 
E 5 HOH A 15 366 15 HOH HOH . 
E 5 HOH A 16 367 16 HOH HOH . 
E 5 HOH A 17 368 17 HOH HOH . 
E 5 HOH A 18 369 18 HOH HOH . 
E 5 HOH A 19 370 19 HOH HOH . 
E 5 HOH A 20 371 20 HOH HOH . 
E 5 HOH A 21 372 21 HOH HOH . 
E 5 HOH A 22 373 22 HOH HOH . 
E 5 HOH A 23 374 23 HOH HOH . 
E 5 HOH A 24 375 24 HOH HOH . 
E 5 HOH A 25 376 25 HOH HOH . 
E 5 HOH A 26 377 26 HOH HOH . 
E 5 HOH A 27 378 27 HOH HOH . 
E 5 HOH A 28 379 28 HOH HOH . 
E 5 HOH A 29 380 29 HOH HOH . 
E 5 HOH A 30 381 30 HOH HOH . 
E 5 HOH A 31 382 31 HOH HOH . 
E 5 HOH A 32 383 32 HOH HOH . 
E 5 HOH A 33 384 33 HOH HOH . 
E 5 HOH A 34 385 34 HOH HOH . 
E 5 HOH A 35 386 35 HOH HOH . 
E 5 HOH A 36 387 36 HOH HOH . 
E 5 HOH A 37 388 37 HOH HOH . 
E 5 HOH A 38 389 38 HOH HOH . 
E 5 HOH A 39 390 39 HOH HOH . 
E 5 HOH A 40 391 40 HOH HOH . 
E 5 HOH A 41 392 41 HOH HOH . 
E 5 HOH A 42 393 42 HOH HOH . 
E 5 HOH A 43 394 43 HOH HOH . 
E 5 HOH A 44 395 44 HOH HOH . 
E 5 HOH A 45 396 45 HOH HOH . 
E 5 HOH A 46 397 46 HOH HOH . 
E 5 HOH A 47 398 47 HOH HOH . 
E 5 HOH A 48 399 48 HOH HOH . 
E 5 HOH A 49 400 49 HOH HOH . 
E 5 HOH A 50 401 50 HOH HOH . 
E 5 HOH A 51 402 51 HOH HOH . 
E 5 HOH A 52 403 52 HOH HOH . 
E 5 HOH A 53 404 53 HOH HOH . 
E 5 HOH A 54 405 54 HOH HOH . 
E 5 HOH A 55 406 55 HOH HOH . 
E 5 HOH A 56 407 56 HOH HOH . 
E 5 HOH A 57 408 57 HOH HOH . 
E 5 HOH A 58 409 58 HOH HOH . 
E 5 HOH A 59 410 59 HOH HOH . 
E 5 HOH A 60 411 60 HOH HOH . 
E 5 HOH A 61 412 61 HOH HOH . 
E 5 HOH A 62 413 62 HOH HOH . 
E 5 HOH A 63 414 63 HOH HOH . 
E 5 HOH A 64 415 64 HOH HOH . 
E 5 HOH A 65 416 65 HOH HOH . 
E 5 HOH A 66 417 66 HOH HOH . 
E 5 HOH A 67 418 67 HOH HOH . 
E 5 HOH A 68 419 68 HOH HOH . 
E 5 HOH A 69 420 69 HOH HOH . 
E 5 HOH A 70 421 70 HOH HOH . 
E 5 HOH A 71 422 71 HOH HOH . 
E 5 HOH A 72 423 72 HOH HOH . 
E 5 HOH A 73 424 73 HOH HOH . 
E 5 HOH A 74 425 74 HOH HOH . 
E 5 HOH A 75 426 75 HOH HOH . 
E 5 HOH A 76 427 76 HOH HOH . 
E 5 HOH A 77 428 77 HOH HOH . 
E 5 HOH A 78 429 78 HOH HOH . 
E 5 HOH A 79 430 79 HOH HOH . 
E 5 HOH A 80 431 80 HOH HOH . 
E 5 HOH A 81 432 81 HOH HOH . 
E 5 HOH A 82 433 82 HOH HOH . 
E 5 HOH A 83 434 83 HOH HOH . 
E 5 HOH A 84 435 84 HOH HOH . 
E 5 HOH A 85 436 85 HOH HOH . 
E 5 HOH A 86 437 86 HOH HOH . 
E 5 HOH A 87 438 87 HOH HOH . 
E 5 HOH A 88 439 88 HOH HOH . 
E 5 HOH A 89 440 89 HOH HOH . 
E 5 HOH A 90 441 90 HOH HOH . 
E 5 HOH A 91 442 91 HOH HOH . 
E 5 HOH A 92 443 92 HOH HOH . 
E 5 HOH A 93 444 93 HOH HOH . 
E 5 HOH A 94 445 94 HOH HOH . 
E 5 HOH A 95 446 95 HOH HOH . 
E 5 HOH A 96 447 96 HOH HOH . 
E 5 HOH A 97 448 97 HOH HOH . 
E 5 HOH A 98 449 98 HOH HOH . 
E 5 HOH A 99 450 99 HOH HOH . 
E 5 HOH A 100 451 100 HOH HOH . 
E 5 HOH A 101 452 101 HOH HOH . 
E 5 HOH A 102 453 102 HOH HOH . 
E 5 HOH A 103 454 103 HOH HOH . 
E 5 HOH A 104 455 104 HOH HOH . 
E 5 HOH A 105 456 105 HOH HOH . 
E 5 HOH A 106 457 106 HOH HOH . 
E 5 HOH A 107 458 107 HOH HOH . 
E 5 HOH A 108 459 108 HOH HOH . 
E 5 HOH A 109 460 109 HOH HOH . 
E 5 HOH A 110 461 110 HOH HOH . 
E 5 HOH A 111 462 111 HOH HOH . 
E 5 HOH A 112 463 112 HOH HOH . 
E 5 HOH A 113 464 113 HOH HOH . 
E 5 HOH A 114 465 114 HOH HOH . 
E 5 HOH A 115 466 115 HOH HOH . 
E 5 HOH A 116 467 116 HOH HOH . 
E 5 HOH A 117 468 117 HOH HOH . 
E 5 HOH A 118 469 118 HOH HOH . 
E 5 HOH A 119 470 119 HOH HOH . 
E 5 HOH A 120 471 120 HOH HOH . 
E 5 HOH A 121 472 121 HOH HOH . 
E 5 HOH A 122 473 122 HOH HOH . 
E 5 HOH A 123 474 123 HOH HOH . 
E 5 HOH A 124 475 124 HOH HOH . 
E 5 HOH A 125 476 125 HOH HOH . 
E 5 HOH A 126 477 126 HOH HOH . 
E 5 HOH A 127 478 127 HOH HOH . 
E 5 HOH A 128 479 128 HOH HOH . 
E 5 HOH A 129 480 129 HOH HOH . 
E 5 HOH A 130 481 130 HOH HOH . 
E 5 HOH A 131 482 131 HOH HOH . 
E 5 HOH A 132 483 132 HOH HOH . 
E 5 HOH A 133 484 133 HOH HOH . 
E 5 HOH A 134 485 134 HOH HOH . 
E 5 HOH A 135 486 135 HOH HOH . 
E 5 HOH A 136 487 136 HOH HOH . 
E 5 HOH A 137 488 137 HOH HOH . 
E 5 HOH A 138 489 138 HOH HOH . 
E 5 HOH A 139 490 139 HOH HOH . 
E 5 HOH A 140 491 140 HOH HOH . 
E 5 HOH A 141 492 141 HOH HOH . 
E 5 HOH A 142 493 142 HOH HOH . 
E 5 HOH A 143 494 143 HOH HOH . 
E 5 HOH A 144 495 144 HOH HOH . 
E 5 HOH A 145 496 145 HOH HOH . 
E 5 HOH A 146 497 146 HOH HOH . 
E 5 HOH A 147 498 147 HOH HOH . 
E 5 HOH A 148 499 148 HOH HOH . 
E 5 HOH A 149 500 149 HOH HOH . 
E 5 HOH A 150 501 150 HOH HOH . 
E 5 HOH A 151 502 151 HOH HOH . 
E 5 HOH A 152 503 152 HOH HOH . 
E 5 HOH A 153 504 153 HOH HOH . 
E 5 HOH A 154 505 154 HOH HOH . 
E 5 HOH A 155 506 155 HOH HOH . 
E 5 HOH A 156 507 156 HOH HOH . 
E 5 HOH A 157 508 157 HOH HOH . 
E 5 HOH A 158 509 158 HOH HOH . 
E 5 HOH A 159 510 159 HOH HOH . 
E 5 HOH A 160 511 160 HOH HOH . 
E 5 HOH A 161 512 161 HOH HOH . 
E 5 HOH A 162 513 162 HOH HOH . 
E 5 HOH A 163 514 163 HOH HOH . 
E 5 HOH A 164 515 164 HOH HOH . 
E 5 HOH A 165 516 165 HOH HOH . 
E 5 HOH A 166 517 166 HOH HOH . 
E 5 HOH A 167 518 167 HOH HOH . 
E 5 HOH A 168 519 168 HOH HOH . 
E 5 HOH A 169 520 169 HOH HOH . 
E 5 HOH A 170 521 170 HOH HOH . 
E 5 HOH A 171 522 171 HOH HOH . 
E 5 HOH A 172 523 172 HOH HOH . 
E 5 HOH A 173 524 173 HOH HOH . 
E 5 HOH A 174 525 174 HOH HOH . 
E 5 HOH A 175 526 175 HOH HOH . 
E 5 HOH A 176 527 176 HOH HOH . 
E 5 HOH A 177 528 177 HOH HOH . 
E 5 HOH A 178 529 178 HOH HOH . 
E 5 HOH A 179 530 179 HOH HOH . 
E 5 HOH A 180 531 180 HOH HOH . 
E 5 HOH A 181 532 181 HOH HOH . 
E 5 HOH A 182 533 182 HOH HOH . 
E 5 HOH A 183 534 183 HOH HOH . 
E 5 HOH A 184 535 184 HOH HOH . 
E 5 HOH A 185 536 185 HOH HOH . 
E 5 HOH A 186 537 186 HOH HOH . 
E 5 HOH A 187 538 187 HOH HOH . 
E 5 HOH A 188 539 188 HOH HOH . 
E 5 HOH A 189 540 189 HOH HOH . 
E 5 HOH A 190 541 190 HOH HOH . 
E 5 HOH A 191 542 191 HOH HOH . 
E 5 HOH A 192 543 192 HOH HOH . 
E 5 HOH A 193 544 193 HOH HOH . 
E 5 HOH A 194 545 194 HOH HOH . 
E 5 HOH A 195 546 195 HOH HOH . 
E 5 HOH A 196 547 196 HOH HOH . 
E 5 HOH A 197 548 197 HOH HOH . 
E 5 HOH A 198 549 198 HOH HOH . 
E 5 HOH A 199 550 199 HOH HOH . 
E 5 HOH A 200 551 200 HOH HOH . 
E 5 HOH A 201 552 201 HOH HOH . 
E 5 HOH A 202 553 202 HOH HOH . 
E 5 HOH A 203 554 203 HOH HOH . 
E 5 HOH A 204 555 204 HOH HOH . 
E 5 HOH A 205 556 205 HOH HOH . 
E 5 HOH A 206 557 206 HOH HOH . 
E 5 HOH A 207 558 207 HOH HOH . 
E 5 HOH A 208 559 208 HOH HOH . 
E 5 HOH A 209 560 209 HOH HOH . 
E 5 HOH A 210 561 210 HOH HOH . 
E 5 HOH A 211 562 211 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . C 3 19.84 43.69 25.871 1 18.28 ? C1 EDO 351 A 1 
HETATM 2 O O1 EDO . . . C 3 19.587 42.838 27 1 26.79 ? O1 EDO 351 A 1 
HETATM 3 C C2 EDO . . . C 3 21.358 43.83 25.717 1 15.56 ? C2 EDO 351 A 1 
HETATM 4 O O2 EDO . . . C 3 21.906 42.845 24.826 1 17.84 ? O2 EDO 351 A 1 
#
_model_server_stats.io_time_ms              57 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           290 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#