data_3GP6 # _model_server_result.job_id BnH8keqiO4PrnzFyefPaCw _model_server_result.datetime_utc '2025-04-27 21:00:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3gp6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":164}' # _entry.id 3GP6 # _exptl.entry_id 3GP6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 266.397 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DODECYL SULFATE' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3GP6 _cell.length_a 113.228 _cell.length_b 113.228 _cell.length_c 55.064 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3GP6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 180 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 62 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O GLU 22 A GLU 21 1_555 X LI LI . A LI 185 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.926 ? metalc ? metalc2 A OXT LEU 163 A LEU 162 1_555 X LI LI . A LI 185 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.809 ? metalc ? metalc3 J O4 MPD . A MPD 171 1_555 X LI LI . A LI 185 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.003 ? metalc ? metalc4 Y LI LI . A LI 186 1_555 Z O HOH . A HOH 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.543 ? metalc ? metalc5 Y LI LI . A LI 186 1_555 Z O HOH . A HOH 215 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.313 ? # _chem_comp.formula 'C12 H26 O4 S' _chem_comp.formula_weight 266.397 _chem_comp.id SDS _chem_comp.mon_nstd_flag . _chem_comp.name 'DODECYL SULFATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1S SDS doub 306 n n S O2S SDS sing 307 n n S O3S SDS sing 308 n n S O4 SDS doub 309 n n O2S C1 SDS sing 310 n n O3S H3S SDS sing 311 n n C1 C12 SDS sing 312 n n C1 H1C1 SDS sing 313 n n C1 H1C2 SDS sing 314 n n C2 C3 SDS sing 315 n n C2 H2C1 SDS sing 316 n n C2 H2C2 SDS sing 317 n n C2 H2C3 SDS sing 318 n n C3 C4 SDS sing 319 n n C3 H3C1 SDS sing 320 n n C3 H3C2 SDS sing 321 n n C4 C5 SDS sing 322 n n C4 H4C1 SDS sing 323 n n C4 H4C2 SDS sing 324 n n C5 C6 SDS sing 325 n n C5 H5C1 SDS sing 326 n n C5 H5C2 SDS sing 327 n n C6 C7 SDS sing 328 n n C6 H6C1 SDS sing 329 n n C6 H6C2 SDS sing 330 n n C7 C8 SDS sing 331 n n C7 H7C1 SDS sing 332 n n C7 H7C2 SDS sing 333 n n C8 C9 SDS sing 334 n n C8 H8C1 SDS sing 335 n n C8 H8C2 SDS sing 336 n n C9 C10 SDS sing 337 n n C9 H9C1 SDS sing 338 n n C9 H9C2 SDS sing 339 n n C10 C11 SDS sing 340 n n C10 H101 SDS sing 341 n n C10 H102 SDS sing 342 n n C11 C12 SDS sing 343 n n C11 H111 SDS sing 344 n n C11 H112 SDS sing 345 n n C12 H121 SDS sing 346 n n C12 H122 SDS sing 347 n n # _atom_sites.entry_id 3GP6 _atom_sites.fract_transf_matrix[1][1] 0.008832 _atom_sites.fract_transf_matrix[1][2] 0.005099 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010198 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018161 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SDS A 1 163 1 SDS SDS . C 2 SDS A 1 164 2 SDS SDS . D 2 SDS A 1 165 3 SDS SDS . E 2 SDS A 1 166 4 SDS SDS . F 2 SDS A 1 167 5 SDS SDS . G 2 SDS A 1 168 6 SDS SDS . H 3 MPD A 1 169 1 MPD MPD . I 3 MPD A 1 170 2 MPD MPD . J 3 MPD A 1 171 3 MPD MPD . K 3 MPD A 1 172 4 MPD MPD . L 3 MPD A 1 173 5 MPD MPD . M 3 MPD A 1 174 6 MPD MPD . N 3 MPD A 1 175 7 MPD MPD . O 3 MPD A 1 176 8 MPD MPD . P 3 MPD A 1 177 9 MPD MPD . Q 4 MRD A 1 178 10 MRD MPD . R 5 SO4 A 1 179 1 SO4 SO4 . S 5 SO4 A 1 180 2 SO4 SO4 . T 5 SO4 A 1 181 3 SO4 SO4 . U 5 SO4 A 1 182 4 SO4 SO4 . V 5 SO4 A 1 183 5 SO4 SO4 . W 5 SO4 A 1 184 6 SO4 SO4 . X 6 LI A 1 185 1 LI LI . Y 6 LI A 1 186 2 LI LI . Z 7 HOH A 1 187 1 HOH HOH . Z 7 HOH A 2 188 2 HOH HOH . Z 7 HOH A 3 189 3 HOH HOH . Z 7 HOH A 4 190 4 HOH HOH . Z 7 HOH A 5 191 5 HOH HOH . Z 7 HOH A 6 192 6 HOH HOH . Z 7 HOH A 7 193 7 HOH HOH . Z 7 HOH A 8 194 8 HOH HOH . Z 7 HOH A 9 195 9 HOH HOH . Z 7 HOH A 10 196 10 HOH HOH . Z 7 HOH A 11 197 11 HOH HOH . Z 7 HOH A 12 198 12 HOH HOH . Z 7 HOH A 13 199 13 HOH HOH . Z 7 HOH A 14 200 14 HOH HOH . Z 7 HOH A 15 201 15 HOH HOH . Z 7 HOH A 16 202 16 HOH HOH . Z 7 HOH A 17 203 17 HOH HOH . Z 7 HOH A 18 204 18 HOH HOH . Z 7 HOH A 19 205 19 HOH HOH . Z 7 HOH A 20 206 20 HOH HOH . Z 7 HOH A 21 207 21 HOH HOH . Z 7 HOH A 22 208 22 HOH HOH . Z 7 HOH A 23 209 23 HOH HOH . Z 7 HOH A 24 210 24 HOH HOH . Z 7 HOH A 25 211 25 HOH HOH . Z 7 HOH A 26 212 26 HOH HOH . Z 7 HOH A 27 213 27 HOH HOH . Z 7 HOH A 28 214 28 HOH HOH . Z 7 HOH A 29 215 29 HOH HOH . Z 7 HOH A 30 216 30 HOH HOH . Z 7 HOH A 31 217 31 HOH HOH . Z 7 HOH A 32 218 32 HOH HOH . Z 7 HOH A 33 219 33 HOH HOH . Z 7 HOH A 34 220 34 HOH HOH . Z 7 HOH A 35 221 35 HOH HOH . Z 7 HOH A 36 222 36 HOH HOH . Z 7 HOH A 37 223 37 HOH HOH . Z 7 HOH A 38 224 38 HOH HOH . Z 7 HOH A 39 225 39 HOH HOH . Z 7 HOH A 40 226 40 HOH HOH . Z 7 HOH A 41 227 41 HOH HOH . Z 7 HOH A 42 228 42 HOH HOH . Z 7 HOH A 43 229 43 HOH HOH . Z 7 HOH A 44 230 44 HOH HOH . Z 7 HOH A 45 231 45 HOH HOH . Z 7 HOH A 46 232 46 HOH HOH . Z 7 HOH A 47 233 47 HOH HOH . Z 7 HOH A 48 234 48 HOH HOH . Z 7 HOH A 49 235 49 HOH HOH . Z 7 HOH A 50 236 50 HOH HOH . Z 7 HOH A 51 237 51 HOH HOH . Z 7 HOH A 52 238 52 HOH HOH . Z 7 HOH A 53 239 53 HOH HOH . Z 7 HOH A 54 240 54 HOH HOH . Z 7 HOH A 55 241 55 HOH HOH . Z 7 HOH A 56 242 56 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SDS . . . C 2 -9.597 47.716 41.271 1 68.24 ? S SDS 164 A 1 HETATM 2 O O1S SDS . . . C 2 -10.446 48.87 41.487 1 69.43 ? O1S SDS 164 A 1 HETATM 3 O O2S SDS . . . C 2 -8.295 48.39 40.739 1 64.03 ? O2S SDS 164 A 1 HETATM 4 O O3S SDS . . . C 2 -9.232 47.027 42.486 1 69.48 ? O3S SDS 164 A 1 HETATM 5 O O4 SDS . . . C 2 -10.047 46.818 40.245 1 70.23 ? O4 SDS 164 A 1 HETATM 6 C C1 SDS . . . C 2 -7.403 47.558 39.907 1 60.92 ? C1 SDS 164 A 1 HETATM 7 C C2 SDS . . . C 2 2.476 52.021 42.877 1 42.23 ? C2 SDS 164 A 1 HETATM 8 C C3 SDS . . . C 2 1.857 50.986 41.988 1 38.72 ? C3 SDS 164 A 1 HETATM 9 C C4 SDS . . . C 2 1.272 51.434 40.674 1 40.04 ? C4 SDS 164 A 1 HETATM 10 C C5 SDS . . . C 2 0.85 50.212 39.908 1 41.8 ? C5 SDS 164 A 1 HETATM 11 C C6 SDS . . . C 2 0.031 50.363 38.645 1 42.64 ? C6 SDS 164 A 1 HETATM 12 C C7 SDS . . . C 2 -1.425 50.772 38.878 1 43.94 ? C7 SDS 164 A 1 HETATM 13 C C8 SDS . . . C 2 -2.35 49.681 39.39 1 45.89 ? C8 SDS 164 A 1 HETATM 14 C C9 SDS . . . C 2 -3.774 50.075 39.056 1 48.31 ? C9 SDS 164 A 1 HETATM 15 C C10 SDS . . . C 2 -4.891 49.457 39.86 1 51.29 ? C10 SDS 164 A 1 HETATM 16 C C11 SDS . . . C 2 -4.902 47.958 39.869 1 54.8 ? C11 SDS 164 A 1 HETATM 17 C C12 SDS . . . C 2 -6.115 47.459 40.642 1 57.71 ? C12 SDS 164 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 249 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 17 #