data_3GPP
#
_model_server_result.job_id            c1ZgGR6VaqG93Yw8cDyqDw 
_model_server_result.datetime_utc      '2025-03-06 06:24:09' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3gpp 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":300}' 
#
_entry.id    3GPP 
#
_exptl.entry_id    3GPP 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              65.409 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ZINC ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3GPP 
_cell.length_a            45.243 
_cell.length_b            93.841 
_cell.length_c            103.405 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3GPP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 C O3' DC 7 C DC 7 1_555 C P 8OG 8 C 8OG 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.598 ? 
covale ? covale2 C O3' 8OG 8 C 8OG 8 1_555 C P DG 9 C DG 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.601 ? 
metalc ? metalc1 A SG CYS 248 A CYS 249 1_555 D ZN ZN . A ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? 
metalc ? metalc2 A SG CYS 251 A CYS 252 1_555 D ZN ZN . A ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? 
metalc ? metalc3 A SG CYS 268 A CYS 269 1_555 D ZN ZN . A ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.283 ? 
metalc ? metalc4 A SG CYS 271 A CYS 272 1_555 D ZN ZN . A ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? 
hydrog 'DG-DC PAIR' hydrog1 B N1 DG 3 B DG 3 1_555 C N3 DC 15 C DC 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog2 B N3 DT 4 B DT 4 1_555 C N1 DA 14 C DA 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog3 B O4 DT 4 B DT 4 1_555 C N6 DA 14 C DA 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog4 B N1 DA 5 B DA 5 1_555 C N3 DT 13 C DT 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog5 B N6 DA 5 B DA 5 1_555 C O4 DT 13 C DT 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog6 B N1 DG 6 B DG 6 1_555 C N3 DC 12 C DC 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog7 B N2 DG 6 B DG 6 1_555 C O2 DC 12 C DC 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog8 B O6 DG 6 B DG 6 1_555 C N4 DC 12 C DC 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog9 B N1 DA 7 B DA 7 1_555 C N3 DT 11 C DT 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog10 B N6 DA 7 B DA 7 1_555 C O4 DT 11 C DT 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog11 B N3 DT 8 B DT 8 1_555 C N1 DA 10 C DA 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog12 B O4 DT 8 B DT 8 1_555 C N6 DA 10 C DA 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog13 B N3 DC 9 B DC 9 1_555 C N1 DG 9 C DG 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog14 B N4 DC 9 B DC 9 1_555 C O6 DG 9 C DG 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog15 B O2 DC 9 B DC 9 1_555 C N2 DG 9 C DG 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog16 B N3 DC 10 B DC 10 1_555 C N1 8OG 8 C 8OG 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog17 B N4 DC 10 B DC 10 1_555 C O6 8OG 8 C 8OG 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog18 B O2 DC 10 B DC 10 1_555 C N2 8OG 8 C 8OG 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog19 B N1 DG 11 B DG 11 1_555 C N3 DC 7 C DC 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog20 B N2 DG 11 B DG 11 1_555 C O2 DC 7 C DC 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog21 B O6 DG 11 B DG 11 1_555 C N4 DC 7 C DC 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog22 B N1 DG 12 B DG 12 1_555 C N3 DC 6 C DC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog23 B N2 DG 12 B DG 12 1_555 C O2 DC 6 C DC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog24 B O6 DG 12 B DG 12 1_555 C N4 DC 6 C DC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog25 B N1 DA 13 B DA 13 1_555 C N3 DT 5 C DT 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog26 B N6 DA 13 B DA 13 1_555 C O4 DT 5 C DT 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog 'DC-DG PAIR' hydrog27 B O2 DC 14 B DC 14 1_555 C N1 DG 4 C DG 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
#
_chem_comp.formula           'Zn 2' 
_chem_comp.formula_weight    65.409 
_chem_comp.id                ZN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ZINC ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3GPP 
_atom_sites.fract_transf_matrix[1][1]    0.022103 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010656 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009671 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 ZN A 1 300 300 ZN ZN . 
E 5 HOH A 1 1 1 HOH HOH . 
E 5 HOH A 2 275 2 HOH HOH . 
E 5 HOH A 3 276 3 HOH HOH . 
E 5 HOH A 4 277 4 HOH HOH . 
E 5 HOH A 5 278 5 HOH HOH . 
E 5 HOH A 6 279 6 HOH HOH . 
E 5 HOH A 7 280 7 HOH HOH . 
E 5 HOH A 8 281 8 HOH HOH . 
E 5 HOH A 9 282 9 HOH HOH . 
E 5 HOH A 10 283 10 HOH HOH . 
E 5 HOH A 11 284 11 HOH HOH . 
E 5 HOH A 12 285 12 HOH HOH . 
E 5 HOH A 13 286 13 HOH HOH . 
E 5 HOH A 14 287 14 HOH HOH . 
E 5 HOH A 15 288 15 HOH HOH . 
E 5 HOH A 16 289 16 HOH HOH . 
E 5 HOH A 17 290 17 HOH HOH . 
E 5 HOH A 18 291 18 HOH HOH . 
E 5 HOH A 19 292 19 HOH HOH . 
E 5 HOH A 20 293 20 HOH HOH . 
E 5 HOH A 21 294 21 HOH HOH . 
E 5 HOH A 22 295 22 HOH HOH . 
E 5 HOH A 23 296 23 HOH HOH . 
E 5 HOH A 24 297 24 HOH HOH . 
E 5 HOH A 25 298 25 HOH HOH . 
E 5 HOH A 26 299 26 HOH HOH . 
E 5 HOH A 27 301 27 HOH HOH . 
E 5 HOH A 28 302 28 HOH HOH . 
E 5 HOH A 29 303 29 HOH HOH . 
E 5 HOH A 30 304 30 HOH HOH . 
E 5 HOH A 31 305 31 HOH HOH . 
E 5 HOH A 32 306 32 HOH HOH . 
E 5 HOH A 33 307 33 HOH HOH . 
E 5 HOH A 34 308 34 HOH HOH . 
E 5 HOH A 35 309 35 HOH HOH . 
E 5 HOH A 36 310 36 HOH HOH . 
E 5 HOH A 37 311 37 HOH HOH . 
E 5 HOH A 38 312 38 HOH HOH . 
E 5 HOH A 39 313 39 HOH HOH . 
E 5 HOH A 40 314 40 HOH HOH . 
E 5 HOH A 41 315 41 HOH HOH . 
E 5 HOH A 42 316 42 HOH HOH . 
E 5 HOH A 43 317 43 HOH HOH . 
E 5 HOH A 44 318 44 HOH HOH . 
E 5 HOH A 45 319 45 HOH HOH . 
E 5 HOH A 46 320 46 HOH HOH . 
E 5 HOH A 47 321 47 HOH HOH . 
E 5 HOH A 48 322 48 HOH HOH . 
E 5 HOH A 49 323 49 HOH HOH . 
E 5 HOH A 50 324 50 HOH HOH . 
E 5 HOH A 51 325 51 HOH HOH . 
E 5 HOH A 52 326 52 HOH HOH . 
E 5 HOH A 53 327 53 HOH HOH . 
E 5 HOH A 54 328 54 HOH HOH . 
E 5 HOH A 55 329 55 HOH HOH . 
E 5 HOH A 56 330 56 HOH HOH . 
E 5 HOH A 57 331 57 HOH HOH . 
E 5 HOH A 58 332 58 HOH HOH . 
E 5 HOH A 59 333 59 HOH HOH . 
E 5 HOH A 60 334 60 HOH HOH . 
E 5 HOH A 61 335 61 HOH HOH . 
E 5 HOH A 62 336 62 HOH HOH . 
E 5 HOH A 63 337 63 HOH HOH . 
E 5 HOH A 64 338 64 HOH HOH . 
E 5 HOH A 65 339 65 HOH HOH . 
E 5 HOH A 66 340 66 HOH HOH . 
E 5 HOH A 67 341 67 HOH HOH . 
E 5 HOH A 68 342 68 HOH HOH . 
E 5 HOH A 69 343 69 HOH HOH . 
E 5 HOH A 70 344 70 HOH HOH . 
E 5 HOH A 71 345 71 HOH HOH . 
E 5 HOH A 72 346 72 HOH HOH . 
E 5 HOH A 73 347 73 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           ZN 
_atom_site.label_atom_id         ZN 
_atom_site.label_comp_id         ZN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               -15.949 
_atom_site.Cartn_y               31.057 
_atom_site.Cartn_z               36.59 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        36.85 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          ZN 
_atom_site.auth_comp_id          ZN 
_atom_site.auth_seq_id           300 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           272 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           1 
#