data_3GQE # _model_server_result.job_id 0mY2Flg9hHTSIzy5A-l4Wg _model_server_result.datetime_utc '2024-12-01 08:52:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3gqe # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":167}' # _entry.id 3GQE # _exptl.entry_id 3GQE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 163.172 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description BICINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3GQE _cell.length_a 129.61 _cell.length_b 129.61 _cell.length_c 42.49 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3GQE _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D 1 1 B,E 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 36 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 34 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 36 _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 34 _struct_conn.ptnr2_symmetry 8_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.233 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C6 H13 N O4' _chem_comp.formula_weight 163.172 _chem_comp.id BCN _chem_comp.mon_nstd_flag . _chem_comp.name BICINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C1 BCN sing 70 n n N1 C3 BCN sing 71 n n N1 C5 BCN sing 72 n n C1 C2 BCN sing 73 n n C1 H11 BCN sing 74 n n C1 H12 BCN sing 75 n n C2 O21 BCN doub 76 n n C2 O22 BCN sing 77 n n O22 HO2 BCN sing 78 n n C3 C4 BCN sing 79 n n C3 H31 BCN sing 80 n n C3 H32 BCN sing 81 n n C4 O4 BCN sing 82 n n C4 H41 BCN sing 83 n n C4 H42 BCN sing 84 n n O4 HO4 BCN sing 85 n n C5 C6 BCN sing 86 n n C5 H51 BCN sing 87 n n C5 H52 BCN sing 88 n n C6 O6 BCN sing 89 n n C6 H61 BCN sing 90 n n C6 H62 BCN sing 91 n n O6 HO6 BCN sing 92 n n # _atom_sites.entry_id 3GQE _atom_sites.fract_transf_matrix[1][1] 0.007715 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007715 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.023535 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 BCN A 1 167 161 BCN BCN . D 3 HOH A 1 168 162 HOH HOH . D 3 HOH A 2 169 169 HOH HOH . D 3 HOH A 3 170 170 HOH HOH . D 3 HOH A 4 171 163 HOH HOH . D 3 HOH A 5 172 172 HOH HOH . D 3 HOH A 6 173 173 HOH HOH . D 3 HOH A 7 174 174 HOH HOH . D 3 HOH A 8 175 175 HOH HOH . D 3 HOH A 9 176 176 HOH HOH . D 3 HOH A 10 177 164 HOH HOH . D 3 HOH A 11 178 165 HOH HOH . D 3 HOH A 12 179 179 HOH HOH . D 3 HOH A 13 180 180 HOH HOH . D 3 HOH A 14 181 181 HOH HOH . D 3 HOH A 15 182 166 HOH HOH . D 3 HOH A 16 183 167 HOH HOH . D 3 HOH A 17 186 186 HOH HOH . D 3 HOH A 18 187 187 HOH HOH . D 3 HOH A 19 188 188 HOH HOH . D 3 HOH A 20 189 189 HOH HOH . D 3 HOH A 21 190 190 HOH HOH . D 3 HOH A 22 192 192 HOH HOH . D 3 HOH A 23 195 195 HOH HOH . D 3 HOH A 24 196 196 HOH HOH . D 3 HOH A 25 197 197 HOH HOH . D 3 HOH A 26 198 198 HOH HOH . D 3 HOH A 27 200 200 HOH HOH . D 3 HOH A 28 202 202 HOH HOH . D 3 HOH A 29 203 203 HOH HOH . D 3 HOH A 30 204 204 HOH HOH . D 3 HOH A 31 205 205 HOH HOH . D 3 HOH A 32 206 206 HOH HOH . D 3 HOH A 33 207 207 HOH HOH . D 3 HOH A 34 209 209 HOH HOH . D 3 HOH A 35 211 211 HOH HOH . D 3 HOH A 36 212 212 HOH HOH . D 3 HOH A 37 213 213 HOH HOH . D 3 HOH A 38 214 214 HOH HOH . D 3 HOH A 39 217 217 HOH HOH . D 3 HOH A 40 218 218 HOH HOH . D 3 HOH A 41 220 220 HOH HOH . D 3 HOH A 42 221 221 HOH HOH . D 3 HOH A 43 222 222 HOH HOH . D 3 HOH A 44 224 224 HOH HOH . D 3 HOH A 45 225 225 HOH HOH . D 3 HOH A 46 226 226 HOH HOH . D 3 HOH A 47 227 227 HOH HOH . D 3 HOH A 48 228 228 HOH HOH . D 3 HOH A 49 229 229 HOH HOH . D 3 HOH A 50 233 233 HOH HOH . D 3 HOH A 51 234 234 HOH HOH . D 3 HOH A 52 235 235 HOH HOH . D 3 HOH A 53 237 237 HOH HOH . D 3 HOH A 54 238 238 HOH HOH . D 3 HOH A 55 240 240 HOH HOH . D 3 HOH A 56 241 241 HOH HOH . D 3 HOH A 57 244 244 HOH HOH . D 3 HOH A 58 246 246 HOH HOH . D 3 HOH A 59 247 247 HOH HOH . D 3 HOH A 60 250 250 HOH HOH . D 3 HOH A 61 252 252 HOH HOH . D 3 HOH A 62 253 253 HOH HOH . D 3 HOH A 63 254 254 HOH HOH . D 3 HOH A 64 255 255 HOH HOH . D 3 HOH A 65 256 256 HOH HOH . D 3 HOH A 66 257 257 HOH HOH . D 3 HOH A 67 258 258 HOH HOH . D 3 HOH A 68 259 259 HOH HOH . D 3 HOH A 69 260 260 HOH HOH . D 3 HOH A 70 265 265 HOH HOH . D 3 HOH A 71 267 267 HOH HOH . D 3 HOH A 72 269 269 HOH HOH . D 3 HOH A 73 270 270 HOH HOH . D 3 HOH A 74 271 271 HOH HOH . D 3 HOH A 75 272 272 HOH HOH . D 3 HOH A 76 279 279 HOH HOH . D 3 HOH A 77 280 280 HOH HOH . D 3 HOH A 78 281 281 HOH HOH . D 3 HOH A 79 283 283 HOH HOH . D 3 HOH A 80 284 284 HOH HOH . D 3 HOH A 81 286 286 HOH HOH . D 3 HOH A 82 287 287 HOH HOH . D 3 HOH A 83 288 288 HOH HOH . D 3 HOH A 84 289 289 HOH HOH . D 3 HOH A 85 290 290 HOH HOH . D 3 HOH A 86 291 291 HOH HOH . D 3 HOH A 87 293 293 HOH HOH . D 3 HOH A 88 294 294 HOH HOH . D 3 HOH A 89 295 295 HOH HOH . D 3 HOH A 90 296 296 HOH HOH . D 3 HOH A 91 297 297 HOH HOH . D 3 HOH A 92 298 298 HOH HOH . D 3 HOH A 93 299 299 HOH HOH . D 3 HOH A 94 300 300 HOH HOH . D 3 HOH A 95 302 302 HOH HOH . D 3 HOH A 96 305 305 HOH HOH . D 3 HOH A 97 307 307 HOH HOH . E 3 HOH B 1 167 167 HOH HOH . E 3 HOH B 2 168 168 HOH HOH . E 3 HOH B 3 169 169 HOH HOH . E 3 HOH B 4 170 162 HOH HOH . E 3 HOH B 5 171 171 HOH HOH . E 3 HOH B 6 172 163 HOH HOH . E 3 HOH B 7 173 164 HOH HOH . E 3 HOH B 8 174 165 HOH HOH . E 3 HOH B 9 175 166 HOH HOH . E 3 HOH B 10 177 177 HOH HOH . E 3 HOH B 11 178 178 HOH HOH . E 3 HOH B 12 182 182 HOH HOH . E 3 HOH B 13 183 183 HOH HOH . E 3 HOH B 14 184 184 HOH HOH . E 3 HOH B 15 185 185 HOH HOH . E 3 HOH B 16 191 191 HOH HOH . E 3 HOH B 17 193 193 HOH HOH . E 3 HOH B 18 194 194 HOH HOH . E 3 HOH B 19 199 199 HOH HOH . E 3 HOH B 20 201 201 HOH HOH . E 3 HOH B 21 208 208 HOH HOH . E 3 HOH B 22 210 210 HOH HOH . E 3 HOH B 23 215 215 HOH HOH . E 3 HOH B 24 216 216 HOH HOH . E 3 HOH B 25 219 219 HOH HOH . E 3 HOH B 26 223 223 HOH HOH . E 3 HOH B 27 230 230 HOH HOH . E 3 HOH B 28 231 231 HOH HOH . E 3 HOH B 29 232 232 HOH HOH . E 3 HOH B 30 236 236 HOH HOH . E 3 HOH B 31 239 239 HOH HOH . E 3 HOH B 32 242 242 HOH HOH . E 3 HOH B 33 243 243 HOH HOH . E 3 HOH B 34 245 245 HOH HOH . E 3 HOH B 35 248 248 HOH HOH . E 3 HOH B 36 249 249 HOH HOH . E 3 HOH B 37 251 251 HOH HOH . E 3 HOH B 38 261 261 HOH HOH . E 3 HOH B 39 262 262 HOH HOH . E 3 HOH B 40 263 263 HOH HOH . E 3 HOH B 41 264 264 HOH HOH . E 3 HOH B 42 266 266 HOH HOH . E 3 HOH B 43 268 268 HOH HOH . E 3 HOH B 44 273 273 HOH HOH . E 3 HOH B 45 274 274 HOH HOH . E 3 HOH B 46 275 275 HOH HOH . E 3 HOH B 47 276 276 HOH HOH . E 3 HOH B 48 277 277 HOH HOH . E 3 HOH B 49 278 278 HOH HOH . E 3 HOH B 50 282 282 HOH HOH . E 3 HOH B 51 285 285 HOH HOH . E 3 HOH B 52 292 292 HOH HOH . E 3 HOH B 53 301 301 HOH HOH . E 3 HOH B 54 303 303 HOH HOH . E 3 HOH B 55 304 304 HOH HOH . E 3 HOH B 56 306 306 HOH HOH . E 3 HOH B 57 308 308 HOH HOH . E 3 HOH B 58 309 309 HOH HOH . E 3 HOH B 59 310 310 HOH HOH . E 3 HOH B 60 311 311 HOH HOH . E 3 HOH B 61 312 312 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 BCN . . . C 2 62.035 24.778 15.99 1 46.25 ? N1 BCN 167 A 1 HETATM 2 C C1 BCN . . . C 2 62.584 23.677 16.808 1 44.78 ? C1 BCN 167 A 1 HETATM 3 C C2 BCN . . . C 2 63.482 22.674 16.072 1 49.18 ? C2 BCN 167 A 1 HETATM 4 O O21 BCN . . . C 2 64.519 22.271 16.669 1 48.96 ? O21 BCN 167 A 1 HETATM 5 O O22 BCN . . . C 2 63.186 22.249 14.918 1 47.2 ? O22 BCN 167 A 1 HETATM 6 C C3 BCN . . . C 2 62.908 25.793 15.366 1 48.49 ? C3 BCN 167 A 1 HETATM 7 C C4 BCN . . . C 2 62.166 27.14 15.253 1 46.77 ? C4 BCN 167 A 1 HETATM 8 O O4 BCN . . . C 2 62.868 28.201 15.929 1 47.17 ? O4 BCN 167 A 1 HETATM 9 C C5 BCN . . . C 2 60.596 24.918 15.765 1 42.69 ? C5 BCN 167 A 1 HETATM 10 C C6 BCN . . . C 2 59.903 25.06 17.113 1 39.31 ? C6 BCN 167 A 1 HETATM 11 O O6 BCN . . . C 2 59.358 23.804 17.541 1 37.1 ? O6 BCN 167 A 1 # _model_server_stats.io_time_ms 46 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 468 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 11 #