data_3GRN # _model_server_result.job_id 2Blzvuhr01q8ippKsGXfMA _model_server_result.datetime_utc '2024-11-12 15:50:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3grn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":155}' # _entry.id 3GRN # _exptl.entry_id 3GRN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 99.98 _cell.angle_beta 100.43 _cell.angle_gamma 117.57 _cell.entry_id 3GRN _cell.length_a 39.397 _cell.length_b 42.437 _cell.length_c 55.599 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3GRN _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G 1 1 B,D,E,G 2 1 A,C,F 2 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 1_665 x+1,y+1,z 1 0 0 0 1 0 0 0 1 19.7558 37.618111 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 116 n n C1 C2 GOL sing 117 n n C1 H11 GOL sing 118 n n C1 H12 GOL sing 119 n n O1 HO1 GOL sing 120 n n C2 O2 GOL sing 121 n n C2 C3 GOL sing 122 n n C2 H2 GOL sing 123 n n O2 HO2 GOL sing 124 n n C3 O3 GOL sing 125 n n C3 H31 GOL sing 126 n n C3 H32 GOL sing 127 n n O3 HO3 GOL sing 128 n n # _atom_sites.entry_id 3GRN _atom_sites.fract_transf_matrix[1][1] 0.025383 _atom_sites.fract_transf_matrix[1][2] 0.013254 _atom_sites.fract_transf_matrix[1][3] 0.008981 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.026584 _atom_sites.fract_transf_matrix[2][3] 0.008205 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019139 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL A 1 154 1 GOL GOL . D 2 GOL B 1 154 1 GOL GOL . E 2 GOL B 1 155 1 GOL GOL . F 3 HOH A 1 155 155 HOH HOH . F 3 HOH A 2 156 156 HOH HOH . F 3 HOH A 3 157 157 HOH HOH . F 3 HOH A 4 158 4 HOH HOH . F 3 HOH A 5 159 5 HOH HOH . F 3 HOH A 6 160 6 HOH HOH . F 3 HOH A 7 161 7 HOH HOH . F 3 HOH A 8 162 8 HOH HOH . F 3 HOH A 9 163 10 HOH HOH . F 3 HOH A 10 164 17 HOH HOH . F 3 HOH A 11 165 20 HOH HOH . F 3 HOH A 12 166 21 HOH HOH . F 3 HOH A 13 167 23 HOH HOH . F 3 HOH A 14 168 24 HOH HOH . F 3 HOH A 15 169 169 HOH HOH . F 3 HOH A 16 170 170 HOH HOH . F 3 HOH A 17 171 171 HOH HOH . F 3 HOH A 18 172 172 HOH HOH . F 3 HOH A 19 173 173 HOH HOH . F 3 HOH A 20 174 174 HOH HOH . F 3 HOH A 21 175 175 HOH HOH . F 3 HOH A 22 176 176 HOH HOH . F 3 HOH A 23 177 177 HOH HOH . F 3 HOH A 24 178 25 HOH HOH . F 3 HOH A 25 179 29 HOH HOH . F 3 HOH A 26 180 32 HOH HOH . F 3 HOH A 27 181 34 HOH HOH . F 3 HOH A 28 182 35 HOH HOH . F 3 HOH A 29 183 36 HOH HOH . F 3 HOH A 30 184 184 HOH HOH . F 3 HOH A 31 185 37 HOH HOH . F 3 HOH A 32 186 40 HOH HOH . F 3 HOH A 33 187 42 HOH HOH . F 3 HOH A 34 188 43 HOH HOH . F 3 HOH A 35 189 44 HOH HOH . F 3 HOH A 36 190 49 HOH HOH . F 3 HOH A 37 191 51 HOH HOH . F 3 HOH A 38 192 52 HOH HOH . F 3 HOH A 39 193 54 HOH HOH . F 3 HOH A 40 194 58 HOH HOH . F 3 HOH A 41 195 63 HOH HOH . F 3 HOH A 42 196 64 HOH HOH . F 3 HOH A 43 197 65 HOH HOH . F 3 HOH A 44 198 74 HOH HOH . F 3 HOH A 45 199 76 HOH HOH . F 3 HOH A 46 200 79 HOH HOH . F 3 HOH A 47 201 85 HOH HOH . F 3 HOH A 48 202 86 HOH HOH . F 3 HOH A 49 203 91 HOH HOH . F 3 HOH A 50 204 95 HOH HOH . F 3 HOH A 51 205 96 HOH HOH . F 3 HOH A 52 206 97 HOH HOH . F 3 HOH A 53 207 98 HOH HOH . F 3 HOH A 54 208 26 HOH HOH . F 3 HOH A 55 209 100 HOH HOH . F 3 HOH A 56 212 109 HOH HOH . F 3 HOH A 57 213 110 HOH HOH . F 3 HOH A 58 214 112 HOH HOH . F 3 HOH A 59 215 116 HOH HOH . F 3 HOH A 60 216 117 HOH HOH . F 3 HOH A 61 217 121 HOH HOH . F 3 HOH A 62 218 122 HOH HOH . F 3 HOH A 63 219 131 HOH HOH . F 3 HOH A 64 220 137 HOH HOH . F 3 HOH A 65 221 143 HOH HOH . F 3 HOH A 66 222 144 HOH HOH . F 3 HOH A 67 223 146 HOH HOH . F 3 HOH A 68 224 149 HOH HOH . F 3 HOH A 69 225 150 HOH HOH . F 3 HOH A 70 226 152 HOH HOH . F 3 HOH A 71 227 153 HOH HOH . F 3 HOH A 72 228 154 HOH HOH . G 3 HOH B 1 156 1 HOH HOH . G 3 HOH B 2 157 2 HOH HOH . G 3 HOH B 3 158 158 HOH HOH . G 3 HOH B 4 159 159 HOH HOH . G 3 HOH B 5 160 160 HOH HOH . G 3 HOH B 6 161 161 HOH HOH . G 3 HOH B 7 162 162 HOH HOH . G 3 HOH B 8 163 163 HOH HOH . G 3 HOH B 9 164 164 HOH HOH . G 3 HOH B 10 165 165 HOH HOH . G 3 HOH B 11 166 166 HOH HOH . G 3 HOH B 12 167 167 HOH HOH . G 3 HOH B 13 168 168 HOH HOH . G 3 HOH B 14 169 3 HOH HOH . G 3 HOH B 15 170 9 HOH HOH . G 3 HOH B 16 171 11 HOH HOH . G 3 HOH B 17 172 12 HOH HOH . G 3 HOH B 18 173 13 HOH HOH . G 3 HOH B 19 174 14 HOH HOH . G 3 HOH B 20 175 15 HOH HOH . G 3 HOH B 21 176 16 HOH HOH . G 3 HOH B 22 177 19 HOH HOH . G 3 HOH B 23 178 178 HOH HOH . G 3 HOH B 24 179 179 HOH HOH . G 3 HOH B 25 180 180 HOH HOH . G 3 HOH B 26 181 181 HOH HOH . G 3 HOH B 27 182 182 HOH HOH . G 3 HOH B 28 183 183 HOH HOH . G 3 HOH B 29 185 27 HOH HOH . G 3 HOH B 30 186 28 HOH HOH . G 3 HOH B 31 187 31 HOH HOH . G 3 HOH B 32 188 33 HOH HOH . G 3 HOH B 33 189 41 HOH HOH . G 3 HOH B 34 190 45 HOH HOH . G 3 HOH B 35 191 46 HOH HOH . G 3 HOH B 36 192 48 HOH HOH . G 3 HOH B 37 193 50 HOH HOH . G 3 HOH B 38 194 53 HOH HOH . G 3 HOH B 39 195 55 HOH HOH . G 3 HOH B 40 196 56 HOH HOH . G 3 HOH B 41 197 57 HOH HOH . G 3 HOH B 42 198 59 HOH HOH . G 3 HOH B 43 199 60 HOH HOH . G 3 HOH B 44 200 61 HOH HOH . G 3 HOH B 45 201 62 HOH HOH . G 3 HOH B 46 202 66 HOH HOH . G 3 HOH B 47 203 67 HOH HOH . G 3 HOH B 48 204 68 HOH HOH . G 3 HOH B 49 205 69 HOH HOH . G 3 HOH B 50 206 70 HOH HOH . G 3 HOH B 51 207 72 HOH HOH . G 3 HOH B 52 208 99 HOH HOH . G 3 HOH B 53 209 77 HOH HOH . G 3 HOH B 54 210 104 HOH HOH . G 3 HOH B 55 211 105 HOH HOH . G 3 HOH B 56 212 84 HOH HOH . G 3 HOH B 57 213 87 HOH HOH . G 3 HOH B 58 214 88 HOH HOH . G 3 HOH B 59 215 89 HOH HOH . G 3 HOH B 60 216 92 HOH HOH . G 3 HOH B 61 217 101 HOH HOH . G 3 HOH B 62 218 102 HOH HOH . G 3 HOH B 63 219 103 HOH HOH . G 3 HOH B 64 220 106 HOH HOH . G 3 HOH B 65 221 108 HOH HOH . G 3 HOH B 66 222 111 HOH HOH . G 3 HOH B 67 223 113 HOH HOH . G 3 HOH B 68 224 115 HOH HOH . G 3 HOH B 69 225 118 HOH HOH . G 3 HOH B 70 226 119 HOH HOH . G 3 HOH B 71 227 124 HOH HOH . G 3 HOH B 72 228 126 HOH HOH . G 3 HOH B 73 229 127 HOH HOH . G 3 HOH B 74 230 128 HOH HOH . G 3 HOH B 75 231 129 HOH HOH . G 3 HOH B 76 232 130 HOH HOH . G 3 HOH B 77 233 132 HOH HOH . G 3 HOH B 78 234 134 HOH HOH . G 3 HOH B 79 235 136 HOH HOH . G 3 HOH B 80 236 139 HOH HOH . G 3 HOH B 81 237 140 HOH HOH . G 3 HOH B 82 238 145 HOH HOH . G 3 HOH B 83 239 147 HOH HOH . G 3 HOH B 84 240 75 HOH HOH . G 3 HOH B 85 241 78 HOH HOH . G 3 HOH B 86 242 81 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . E 2 14.23 2.201 43.471 1 28.74 ? C1 GOL 155 B 1 HETATM 2 O O1 GOL . . . E 2 15.586 1.917 43.211 1 41.39 ? O1 GOL 155 B 1 HETATM 3 C C2 GOL . . . E 2 13.729 1.175 44.464 1 51.1 ? C2 GOL 155 B 1 HETATM 4 O O2 GOL . . . E 2 14.411 1.4 45.676 1 54.33 ? O2 GOL 155 B 1 HETATM 5 C C3 GOL . . . E 2 12.211 1.242 44.665 1 50.13 ? C3 GOL 155 B 1 HETATM 6 O O3 GOL . . . E 2 11.597 2.253 43.893 1 45.86 ? O3 GOL 155 B 1 # _model_server_stats.io_time_ms 63 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 324 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 6 #