data_3GRO # _model_server_result.job_id -Ets5qZZFEjvfaBavSpSBQ _model_server_result.datetime_utc '2024-11-06 02:59:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3gro # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":2}' # _entry.id 3GRO # _exptl.entry_id 3GRO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight ? _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'UNKNOWN ATOM OR ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3GRO _cell.length_a 53.71 _cell.length_b 90.642 _cell.length_c 129.165 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3GRO _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 25 A CYS 45 1_555 A SG CYS 26 A CYS 46 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.094 ? disulf ? disulf2 A SG CYS 76 A CYS 96 1_555 A SG CYS 108 A CYS 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf3 A SG CYS 132 A CYS 152 1_555 A SG CYS 140 A CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf4 B SG CYS 25 B CYS 45 1_555 B SG CYS 26 B CYS 46 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? disulf ? disulf5 B SG CYS 76 B CYS 96 1_555 B SG CYS 108 B CYS 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? disulf ? disulf6 B SG CYS 132 B CYS 152 1_555 B SG CYS 140 B CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? covale ? covale1 A C GLY 20 A GLY 40 1_555 A N MSE 21 A MSE 41 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale2 A C MSE 21 A MSE 41 1_555 A N GLY 22 A GLY 42 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale3 A C SER 30 A SER 50 1_555 A N MSE 31 A MSE 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale4 A C MSE 31 A MSE 51 1_555 A N GLY 32 A GLY 52 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale5 A C LYS 36 A LYS 56 1_555 A N MSE 37 A MSE 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale6 A C MSE 37 A MSE 57 1_555 A N VAL 38 A VAL 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale7 A C LEU 56 A LEU 76 1_555 A N MSE 57 A MSE 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale8 A C MSE 57 A MSE 77 1_555 A N GLU 58 A GLU 78 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? covale ? covale9 A C ALA 91 A ALA 111 1_555 A N MSE 92 A MSE 112 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale10 A C MSE 92 A MSE 112 1_555 A N GLY 93 A GLY 113 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale11 A C PRO 112 A PRO 132 1_555 A N MSE 113 A MSE 133 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale12 A C MSE 113 A MSE 133 1_555 A N ILE 114 A ILE 134 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale13 A C LEU 199 A LEU 219 1_555 A N MSE 200 A MSE 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale14 A C MSE 200 A MSE 220 1_555 A N ALA 201 A ALA 221 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale15 A C VAL 206 A VAL 226 1_555 A N MSE 207 A MSE 227 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale16 A C MSE 207 A MSE 227 1_555 A N VAL 208 A VAL 228 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale17 A C GLU 253 A GLU 273 1_555 A N MSE 254 A MSE 274 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale18 A C MSE 254 A MSE 274 1_555 A N ASP 255 A ASP 275 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale19 B C GLY 20 B GLY 40 1_555 B N MSE 21 B MSE 41 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.315 ? covale ? covale20 B C MSE 21 B MSE 41 1_555 B N GLY 22 B GLY 42 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale21 B C SER 30 B SER 50 1_555 B N MSE 31 B MSE 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale22 B C MSE 31 B MSE 51 1_555 B N GLY 32 B GLY 52 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale23 B C LYS 36 B LYS 56 1_555 B N MSE 37 B MSE 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale24 B C MSE 37 B MSE 57 1_555 B N VAL 38 B VAL 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale25 B C LEU 56 B LEU 76 1_555 B N MSE 57 B MSE 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale26 B C MSE 57 B MSE 77 1_555 B N GLU 58 B GLU 78 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale27 B C ALA 91 B ALA 111 1_555 B N MSE 92 B MSE 112 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale28 B C MSE 92 B MSE 112 1_555 B N GLY 93 B GLY 113 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale29 B C PRO 112 B PRO 132 1_555 B N MSE 113 B MSE 133 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale30 B C MSE 113 B MSE 133 1_555 B N ILE 114 B ILE 134 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale31 B C LEU 199 B LEU 219 1_555 B N MSE 200 B MSE 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale32 B C MSE 200 B MSE 220 1_555 B N ALA 201 B ALA 221 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale33 B C VAL 206 B VAL 226 1_555 B N MSE 207 B MSE 227 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale34 B C MSE 207 B MSE 227 1_555 B N VAL 208 B VAL 228 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale35 B C GLU 253 B GLU 273 1_555 B N MSE 254 B MSE 274 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale36 B C MSE 254 B MSE 274 1_555 B N ASP 255 B ASP 275 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? # _chem_comp.formula ? _chem_comp.formula_weight ? _chem_comp.id UNX _chem_comp.mon_nstd_flag . _chem_comp.name 'UNKNOWN ATOM OR ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3GRO _atom_sites.fract_transf_matrix[1][1] 0.018619 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011032 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007742 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 UNX A 1 3 3 UNX UNX . D 2 UNX A 1 4 4 UNX UNX . E 2 UNX B 1 1 1 UNX UNX . F 2 UNX B 1 2 2 UNX UNX . G 3 HOH A 1 1 1 HOH HOH . G 3 HOH A 2 2 2 HOH HOH . G 3 HOH A 3 5 5 HOH HOH . G 3 HOH A 4 6 6 HOH HOH . G 3 HOH A 5 7 7 HOH HOH . G 3 HOH A 6 8 8 HOH HOH . G 3 HOH A 7 9 9 HOH HOH . G 3 HOH A 8 10 10 HOH HOH . G 3 HOH A 9 12 12 HOH HOH . G 3 HOH A 10 13 13 HOH HOH . G 3 HOH A 11 14 14 HOH HOH . G 3 HOH A 12 15 15 HOH HOH . G 3 HOH A 13 16 16 HOH HOH . G 3 HOH A 14 17 17 HOH HOH . G 3 HOH A 15 18 18 HOH HOH . G 3 HOH A 16 19 19 HOH HOH . G 3 HOH A 17 319 3 HOH HOH . G 3 HOH A 18 320 4 HOH HOH . G 3 HOH A 19 321 24 HOH HOH . H 3 HOH B 1 11 11 HOH HOH . H 3 HOH B 2 20 20 HOH HOH . H 3 HOH B 3 319 21 HOH HOH . H 3 HOH B 4 320 22 HOH HOH . H 3 HOH B 5 321 23 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol X _atom_site.label_atom_id UNK _atom_site.label_comp_id UNX _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 2 _atom_site.Cartn_x 0.838 _atom_site.Cartn_y 14.33 _atom_site.Cartn_z 38.579 _atom_site.occupancy 0.01 _atom_site.B_iso_or_equiv 2 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id UNK _atom_site.auth_comp_id UNX _atom_site.auth_seq_id 2 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 76 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #