data_3GS0 # _model_server_result.job_id MSaxNDV94Aft-u1_0xfaKA _model_server_result.datetime_utc '2024-11-30 17:51:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3gs0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":128}' # _entry.id 3GS0 # _exptl.entry_id 3GS0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 281.306 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2S)-3-[(9H-fluoren-9-ylideneamino)oxy]-2-methylpropanoic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3GS0 _cell.length_a 43.39 _cell.length_b 85.979 _cell.length_c 65.076 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3GS0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F 1 1,2 A,B,C,D,E,F 2 1 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 43.39 85.979 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C17 H15 N O3' _chem_comp.formula_weight 281.306 _chem_comp.id 6BD _chem_comp.mon_nstd_flag . _chem_comp.name '(2S)-3-[(9H-fluoren-9-ylideneamino)oxy]-2-methylpropanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '(S)-3-(9H-fluoren-9-ylideneaminooxy)-2-methylpropanoic acid' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAQ CAS 6BD doub 1 n y CAH CAQ 6BD sing 2 n y CAH CAD 6BD doub 3 n y CAH HAH 6BD sing 4 n n CAD CAF 6BD sing 5 n y CAD HAD 6BD sing 6 n n CAF CAJ 6BD doub 7 n y CAF HAF 6BD sing 8 n n CAJ HAJ 6BD sing 9 n n CAS CAJ 6BD sing 10 n y CAT CAS 6BD sing 11 n y CAT CAK 6BD sing 12 n y CAK HAK 6BD sing 13 n n CAG CAK 6BD doub 14 n y CAG HAG 6BD sing 15 n n CAE CAG 6BD sing 16 n y CAE HAE 6BD sing 17 n n CAI CAE 6BD doub 18 n y CAI CAR 6BD sing 19 n y CAI HAI 6BD sing 20 n n CAR CAT 6BD doub 21 n y CAP CAQ 6BD sing 22 n n CAP CAR 6BD sing 23 n n NAM CAP 6BD doub 24 n n OAN NAM 6BD sing 25 n n CAL OAN 6BD sing 26 n n CAL HAL 6BD sing 27 n n CAL HALA 6BD sing 28 n n CAU CAL 6BD sing 29 n n CAU CAO 6BD sing 30 n n CAU HAU 6BD sing 31 n n CAA CAU 6BD sing 32 n n CAA HAA 6BD sing 33 n n CAA HAAA 6BD sing 34 n n CAA HAAB 6BD sing 35 n n CAO OAB 6BD sing 36 n n OAC CAO 6BD doub 37 n n OAB HOAB 6BD sing 38 n n # _atom_sites.entry_id 3GS0 _atom_sites.fract_transf_matrix[1][1] 0.023047 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011631 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015367 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 6BD A 1 128 1 6BD NEW . D 2 6BD B 1 128 2 6BD NEW . E 3 HOH A 1 129 2 HOH HOH . E 3 HOH A 2 130 5 HOH HOH . E 3 HOH A 3 131 6 HOH HOH . E 3 HOH A 4 132 7 HOH HOH . E 3 HOH A 5 133 9 HOH HOH . E 3 HOH A 6 134 10 HOH HOH . E 3 HOH A 7 135 11 HOH HOH . E 3 HOH A 8 136 12 HOH HOH . E 3 HOH A 9 137 137 HOH HOH . E 3 HOH A 10 138 13 HOH HOH . E 3 HOH A 11 139 139 HOH HOH . E 3 HOH A 12 140 14 HOH HOH . E 3 HOH A 13 141 16 HOH HOH . E 3 HOH A 14 142 22 HOH HOH . E 3 HOH A 15 143 23 HOH HOH . E 3 HOH A 16 144 24 HOH HOH . E 3 HOH A 17 145 25 HOH HOH . E 3 HOH A 18 146 26 HOH HOH . E 3 HOH A 19 147 29 HOH HOH . E 3 HOH A 20 148 30 HOH HOH . E 3 HOH A 21 149 32 HOH HOH . E 3 HOH A 22 150 33 HOH HOH . E 3 HOH A 23 151 151 HOH HOH . E 3 HOH A 24 152 35 HOH HOH . E 3 HOH A 25 153 36 HOH HOH . E 3 HOH A 26 154 154 HOH HOH . E 3 HOH A 27 155 37 HOH HOH . E 3 HOH A 28 156 38 HOH HOH . E 3 HOH A 29 157 40 HOH HOH . E 3 HOH A 30 158 41 HOH HOH . E 3 HOH A 31 159 159 HOH HOH . E 3 HOH A 32 160 42 HOH HOH . E 3 HOH A 33 161 161 HOH HOH . E 3 HOH A 34 162 43 HOH HOH . E 3 HOH A 35 163 44 HOH HOH . E 3 HOH A 36 164 50 HOH HOH . E 3 HOH A 37 165 53 HOH HOH . E 3 HOH A 38 166 58 HOH HOH . E 3 HOH A 39 167 61 HOH HOH . E 3 HOH A 40 168 63 HOH HOH . E 3 HOH A 41 169 64 HOH HOH . E 3 HOH A 42 170 65 HOH HOH . E 3 HOH A 43 171 66 HOH HOH . E 3 HOH A 44 172 70 HOH HOH . E 3 HOH A 45 173 71 HOH HOH . E 3 HOH A 46 174 72 HOH HOH . E 3 HOH A 47 175 81 HOH HOH . E 3 HOH A 48 176 82 HOH HOH . E 3 HOH A 49 177 83 HOH HOH . E 3 HOH A 50 178 87 HOH HOH . E 3 HOH A 51 179 88 HOH HOH . E 3 HOH A 52 180 89 HOH HOH . E 3 HOH A 53 181 91 HOH HOH . E 3 HOH A 54 182 95 HOH HOH . E 3 HOH A 55 183 96 HOH HOH . E 3 HOH A 56 184 101 HOH HOH . E 3 HOH A 57 185 102 HOH HOH . E 3 HOH A 58 186 103 HOH HOH . E 3 HOH A 59 187 107 HOH HOH . E 3 HOH A 60 188 108 HOH HOH . E 3 HOH A 61 189 111 HOH HOH . E 3 HOH A 62 190 112 HOH HOH . E 3 HOH A 63 191 117 HOH HOH . E 3 HOH A 64 192 118 HOH HOH . E 3 HOH A 65 193 119 HOH HOH . E 3 HOH A 66 194 124 HOH HOH . E 3 HOH A 67 195 125 HOH HOH . E 3 HOH A 68 196 127 HOH HOH . E 3 HOH A 69 203 203 HOH HOH . E 3 HOH A 70 205 205 HOH HOH . E 3 HOH A 71 209 209 HOH HOH . E 3 HOH A 72 216 216 HOH HOH . E 3 HOH A 73 217 217 HOH HOH . E 3 HOH A 74 218 218 HOH HOH . E 3 HOH A 75 223 223 HOH HOH . E 3 HOH A 76 236 236 HOH HOH . E 3 HOH A 77 239 239 HOH HOH . E 3 HOH A 78 244 244 HOH HOH . F 3 HOH B 1 129 129 HOH HOH . F 3 HOH B 2 130 1 HOH HOH . F 3 HOH B 3 131 3 HOH HOH . F 3 HOH B 4 132 132 HOH HOH . F 3 HOH B 5 133 4 HOH HOH . F 3 HOH B 6 134 134 HOH HOH . F 3 HOH B 7 135 8 HOH HOH . F 3 HOH B 8 136 17 HOH HOH . F 3 HOH B 9 137 18 HOH HOH . F 3 HOH B 10 138 138 HOH HOH . F 3 HOH B 11 139 19 HOH HOH . F 3 HOH B 12 140 20 HOH HOH . F 3 HOH B 13 141 141 HOH HOH . F 3 HOH B 14 142 142 HOH HOH . F 3 HOH B 15 143 21 HOH HOH . F 3 HOH B 16 144 144 HOH HOH . F 3 HOH B 17 145 27 HOH HOH . F 3 HOH B 18 146 28 HOH HOH . F 3 HOH B 19 147 34 HOH HOH . F 3 HOH B 20 148 39 HOH HOH . F 3 HOH B 21 149 47 HOH HOH . F 3 HOH B 22 150 49 HOH HOH . F 3 HOH B 23 151 51 HOH HOH . F 3 HOH B 24 152 52 HOH HOH . F 3 HOH B 25 153 54 HOH HOH . F 3 HOH B 26 154 55 HOH HOH . F 3 HOH B 27 155 56 HOH HOH . F 3 HOH B 28 156 57 HOH HOH . F 3 HOH B 29 157 59 HOH HOH . F 3 HOH B 30 158 60 HOH HOH . F 3 HOH B 31 159 62 HOH HOH . F 3 HOH B 32 160 68 HOH HOH . F 3 HOH B 33 161 73 HOH HOH . F 3 HOH B 34 162 76 HOH HOH . F 3 HOH B 35 163 163 HOH HOH . F 3 HOH B 36 164 164 HOH HOH . F 3 HOH B 37 165 77 HOH HOH . F 3 HOH B 38 166 78 HOH HOH . F 3 HOH B 39 167 80 HOH HOH . F 3 HOH B 40 168 84 HOH HOH . F 3 HOH B 41 169 85 HOH HOH . F 3 HOH B 42 170 90 HOH HOH . F 3 HOH B 43 171 92 HOH HOH . F 3 HOH B 44 172 93 HOH HOH . F 3 HOH B 45 173 94 HOH HOH . F 3 HOH B 46 174 97 HOH HOH . F 3 HOH B 47 175 99 HOH HOH . F 3 HOH B 48 176 100 HOH HOH . F 3 HOH B 49 177 104 HOH HOH . F 3 HOH B 50 178 106 HOH HOH . F 3 HOH B 51 179 121 HOH HOH . F 3 HOH B 52 180 123 HOH HOH . F 3 HOH B 53 187 187 HOH HOH . F 3 HOH B 54 220 220 HOH HOH . F 3 HOH B 55 224 224 HOH HOH . F 3 HOH B 56 228 228 HOH HOH . F 3 HOH B 57 232 232 HOH HOH . F 3 HOH B 58 240 240 HOH HOH . F 3 HOH B 59 243 243 HOH HOH . F 3 HOH B 60 245 245 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAQ 6BD . . . D 2 22.515 42.215 27.571 0.5 57.3 ? CAQ 6BD 128 B 1 HETATM 2 C CAH 6BD . . . D 2 23.621 41.28 27.288 0.5 57.58 ? CAH 6BD 128 B 1 HETATM 3 C CAD 6BD . . . D 2 24.235 40.78 28.419 0.5 58.04 ? CAD 6BD 128 B 1 HETATM 4 C CAF 6BD . . . D 2 23.824 41.142 29.765 0.5 57.3 ? CAF 6BD 128 B 1 HETATM 5 C CAJ 6BD . . . D 2 22.73 42.069 30.109 0.5 57.66 ? CAJ 6BD 128 B 1 HETATM 6 C CAS 6BD . . . D 2 22.105 42.577 28.918 0.5 57.2 ? CAS 6BD 128 B 1 HETATM 7 C CAT 6BD . . . D 2 21.047 43.47 28.871 0.5 57.31 ? CAT 6BD 128 B 1 HETATM 8 C CAK 6BD . . . D 2 20.277 44.144 29.928 0.5 57.46 ? CAK 6BD 128 B 1 HETATM 9 C CAG 6BD . . . D 2 19.252 45.016 29.577 0.5 57.66 ? CAG 6BD 128 B 1 HETATM 10 C CAE 6BD . . . D 2 18.995 45.219 28.2 0.5 57.64 ? CAE 6BD 128 B 1 HETATM 11 C CAI 6BD . . . D 2 19.759 44.552 27.154 0.5 57.8 ? CAI 6BD 128 B 1 HETATM 12 C CAR 6BD . . . D 2 20.785 43.676 27.542 0.5 57.26 ? CAR 6BD 128 B 1 HETATM 13 C CAP 6BD . . . D 2 21.7 42.881 26.71 0.5 57.3 ? CAP 6BD 128 B 1 HETATM 14 N NAM 6BD . . . D 2 21.763 42.8 25.303 0.5 57.47 ? NAM 6BD 128 B 1 HETATM 15 O OAN 6BD . . . D 2 21.134 43.536 24.475 0.5 57.75 ? OAN 6BD 128 B 1 HETATM 16 C CAL 6BD . . . D 2 20.914 42.879 23.217 0.5 53.7 ? CAL 6BD 128 B 1 HETATM 17 C CAU 6BD . . . D 2 21.05 43.495 21.869 0.5 52.02 ? CAU 6BD 128 B 1 HETATM 18 C CAA 6BD . . . D 2 21.977 42.651 20.926 0.5 51.88 ? CAA 6BD 128 B 1 HETATM 19 C CAO 6BD . . . D 2 21.54 44.915 22.12 0.5 49.89 ? CAO 6BD 128 B 1 HETATM 20 O OAC 6BD . . . D 2 21.107 45.748 21.279 0.5 42.32 ? OAC 6BD 128 B 1 HETATM 21 O OAB 6BD . . . D 2 22.314 45.158 23.117 0.5 51.05 ? OAB 6BD 128 B 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 322 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 21 #