data_3GS6 # _model_server_result.job_id I-7FZHjdGnCjGMrPFXwe_A _model_server_result.datetime_utc '2024-11-05 00:29:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3gs6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":342}' # _entry.id 3GS6 # _exptl.entry_id 3GS6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3GS6 _cell.length_a 47.778 _cell.length_b 86.021 _cell.length_c 86.217 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3GS6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 3GS6 _atom_sites.fract_transf_matrix[1][1] 0.02093 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011625 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011599 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NP6 A 1 341 341 NP6 NP6 . C 3 GOL A 1 342 342 GOL GOL . D 3 GOL A 1 343 343 GOL GOL . E 4 HOH A 1 344 344 HOH HOH . E 4 HOH A 2 345 345 HOH HOH . E 4 HOH A 3 346 346 HOH HOH . E 4 HOH A 4 347 347 HOH HOH . E 4 HOH A 5 348 348 HOH HOH . E 4 HOH A 6 349 349 HOH HOH . E 4 HOH A 7 350 350 HOH HOH . E 4 HOH A 8 351 351 HOH HOH . E 4 HOH A 9 352 352 HOH HOH . E 4 HOH A 10 353 353 HOH HOH . E 4 HOH A 11 354 354 HOH HOH . E 4 HOH A 12 355 355 HOH HOH . E 4 HOH A 13 356 356 HOH HOH . E 4 HOH A 14 357 357 HOH HOH . E 4 HOH A 15 358 358 HOH HOH . E 4 HOH A 16 359 359 HOH HOH . E 4 HOH A 17 360 360 HOH HOH . E 4 HOH A 18 361 361 HOH HOH . E 4 HOH A 19 362 362 HOH HOH . E 4 HOH A 20 363 363 HOH HOH . E 4 HOH A 21 364 364 HOH HOH . E 4 HOH A 22 365 365 HOH HOH . E 4 HOH A 23 366 366 HOH HOH . E 4 HOH A 24 367 367 HOH HOH . E 4 HOH A 25 368 368 HOH HOH . E 4 HOH A 26 369 369 HOH HOH . E 4 HOH A 27 370 370 HOH HOH . E 4 HOH A 28 371 371 HOH HOH . E 4 HOH A 29 372 372 HOH HOH . E 4 HOH A 30 373 373 HOH HOH . E 4 HOH A 31 374 374 HOH HOH . E 4 HOH A 32 375 375 HOH HOH . E 4 HOH A 33 376 376 HOH HOH . E 4 HOH A 34 377 377 HOH HOH . E 4 HOH A 35 378 378 HOH HOH . E 4 HOH A 36 379 379 HOH HOH . E 4 HOH A 37 380 380 HOH HOH . E 4 HOH A 38 381 381 HOH HOH . E 4 HOH A 39 382 382 HOH HOH . E 4 HOH A 40 383 383 HOH HOH . E 4 HOH A 41 384 384 HOH HOH . E 4 HOH A 42 385 385 HOH HOH . E 4 HOH A 43 386 386 HOH HOH . E 4 HOH A 44 387 387 HOH HOH . E 4 HOH A 45 388 388 HOH HOH . E 4 HOH A 46 389 389 HOH HOH . E 4 HOH A 47 390 390 HOH HOH . E 4 HOH A 48 391 391 HOH HOH . E 4 HOH A 49 392 392 HOH HOH . E 4 HOH A 50 393 393 HOH HOH . E 4 HOH A 51 394 394 HOH HOH . E 4 HOH A 52 395 395 HOH HOH . E 4 HOH A 53 396 396 HOH HOH . E 4 HOH A 54 397 397 HOH HOH . E 4 HOH A 55 398 398 HOH HOH . E 4 HOH A 56 399 399 HOH HOH . E 4 HOH A 57 400 400 HOH HOH . E 4 HOH A 58 401 401 HOH HOH . E 4 HOH A 59 402 402 HOH HOH . E 4 HOH A 60 403 403 HOH HOH . E 4 HOH A 61 404 404 HOH HOH . E 4 HOH A 62 405 405 HOH HOH . E 4 HOH A 63 406 406 HOH HOH . E 4 HOH A 64 407 407 HOH HOH . E 4 HOH A 65 408 408 HOH HOH . E 4 HOH A 66 409 409 HOH HOH . E 4 HOH A 67 410 410 HOH HOH . E 4 HOH A 68 411 411 HOH HOH . E 4 HOH A 69 412 412 HOH HOH . E 4 HOH A 70 413 413 HOH HOH . E 4 HOH A 71 414 414 HOH HOH . E 4 HOH A 72 415 415 HOH HOH . E 4 HOH A 73 416 416 HOH HOH . E 4 HOH A 74 417 417 HOH HOH . E 4 HOH A 75 418 418 HOH HOH . E 4 HOH A 76 419 419 HOH HOH . E 4 HOH A 77 420 420 HOH HOH . E 4 HOH A 78 421 421 HOH HOH . E 4 HOH A 79 422 422 HOH HOH . E 4 HOH A 80 423 423 HOH HOH . E 4 HOH A 81 424 424 HOH HOH . E 4 HOH A 82 425 425 HOH HOH . E 4 HOH A 83 426 426 HOH HOH . E 4 HOH A 84 427 427 HOH HOH . E 4 HOH A 85 428 428 HOH HOH . E 4 HOH A 86 429 429 HOH HOH . E 4 HOH A 87 430 430 HOH HOH . E 4 HOH A 88 431 431 HOH HOH . E 4 HOH A 89 432 432 HOH HOH . E 4 HOH A 90 433 433 HOH HOH . E 4 HOH A 91 434 434 HOH HOH . E 4 HOH A 92 435 435 HOH HOH . E 4 HOH A 93 436 436 HOH HOH . E 4 HOH A 94 437 437 HOH HOH . E 4 HOH A 95 438 438 HOH HOH . E 4 HOH A 96 439 430 HOH HOH . E 4 HOH A 97 440 440 HOH HOH . E 4 HOH A 98 441 441 HOH HOH . E 4 HOH A 99 442 442 HOH HOH . E 4 HOH A 100 443 443 HOH HOH . E 4 HOH A 101 444 444 HOH HOH . E 4 HOH A 102 445 445 HOH HOH . E 4 HOH A 103 446 446 HOH HOH . E 4 HOH A 104 447 447 HOH HOH . E 4 HOH A 105 448 448 HOH HOH . E 4 HOH A 106 449 449 HOH HOH . E 4 HOH A 107 450 450 HOH HOH . E 4 HOH A 108 451 451 HOH HOH . E 4 HOH A 109 452 452 HOH HOH . E 4 HOH A 110 453 453 HOH HOH . E 4 HOH A 111 454 454 HOH HOH . E 4 HOH A 112 455 455 HOH HOH . E 4 HOH A 113 456 456 HOH HOH . E 4 HOH A 114 457 457 HOH HOH . E 4 HOH A 115 458 458 HOH HOH . E 4 HOH A 116 459 450 HOH HOH . E 4 HOH A 117 460 460 HOH HOH . E 4 HOH A 118 461 461 HOH HOH . E 4 HOH A 119 462 462 HOH HOH . E 4 HOH A 120 463 463 HOH HOH . E 4 HOH A 121 464 464 HOH HOH . E 4 HOH A 122 465 465 HOH HOH . E 4 HOH A 123 466 466 HOH HOH . E 4 HOH A 124 467 467 HOH HOH . E 4 HOH A 125 468 468 HOH HOH . E 4 HOH A 126 469 469 HOH HOH . E 4 HOH A 127 470 470 HOH HOH . E 4 HOH A 128 471 471 HOH HOH . E 4 HOH A 129 472 472 HOH HOH . E 4 HOH A 130 473 473 HOH HOH . E 4 HOH A 131 474 474 HOH HOH . E 4 HOH A 132 475 475 HOH HOH . E 4 HOH A 133 476 476 HOH HOH . E 4 HOH A 134 477 477 HOH HOH . E 4 HOH A 135 478 478 HOH HOH . E 4 HOH A 136 479 479 HOH HOH . E 4 HOH A 137 480 480 HOH HOH . E 4 HOH A 138 481 481 HOH HOH . E 4 HOH A 139 482 482 HOH HOH . E 4 HOH A 140 483 483 HOH HOH . E 4 HOH A 141 484 484 HOH HOH . E 4 HOH A 142 485 485 HOH HOH . E 4 HOH A 143 486 486 HOH HOH . E 4 HOH A 144 487 487 HOH HOH . E 4 HOH A 145 488 488 HOH HOH . E 4 HOH A 146 489 489 HOH HOH . E 4 HOH A 147 490 490 HOH HOH . E 4 HOH A 148 491 491 HOH HOH . E 4 HOH A 149 492 492 HOH HOH . E 4 HOH A 150 493 493 HOH HOH . E 4 HOH A 151 494 494 HOH HOH . E 4 HOH A 152 495 495 HOH HOH . E 4 HOH A 153 496 496 HOH HOH . E 4 HOH A 154 497 497 HOH HOH . E 4 HOH A 155 498 498 HOH HOH . E 4 HOH A 156 499 400 HOH HOH . E 4 HOH A 157 500 500 HOH HOH . E 4 HOH A 158 501 501 HOH HOH . E 4 HOH A 159 502 502 HOH HOH . E 4 HOH A 160 503 503 HOH HOH . E 4 HOH A 161 504 504 HOH HOH . E 4 HOH A 162 505 505 HOH HOH . E 4 HOH A 163 506 506 HOH HOH . E 4 HOH A 164 507 507 HOH HOH . E 4 HOH A 165 508 508 HOH HOH . E 4 HOH A 166 509 509 HOH HOH . E 4 HOH A 167 510 510 HOH HOH . E 4 HOH A 168 511 511 HOH HOH . E 4 HOH A 169 512 512 HOH HOH . E 4 HOH A 170 513 513 HOH HOH . E 4 HOH A 171 514 514 HOH HOH . E 4 HOH A 172 515 515 HOH HOH . E 4 HOH A 173 516 516 HOH HOH . E 4 HOH A 174 517 517 HOH HOH . E 4 HOH A 175 518 518 HOH HOH . E 4 HOH A 176 519 519 HOH HOH . E 4 HOH A 177 520 520 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 3 -4.492 -13.443 30.807 1 35.83 ? C1 GOL 342 A 1 HETATM 2 O O1 GOL . . . C 3 -4.976 -12.155 31.094 1 36.07 ? O1 GOL 342 A 1 HETATM 3 C C2 GOL . . . C 3 -4.915 -14.369 31.936 1 36.35 ? C2 GOL 342 A 1 HETATM 4 O O2 GOL . . . C 3 -4.048 -14.165 33.03 1 37.44 ? O2 GOL 342 A 1 HETATM 5 C C3 GOL . . . C 3 -4.83 -15.822 31.5 1 36.31 ? C3 GOL 342 A 1 HETATM 6 O O3 GOL . . . C 3 -4.43 -16.601 32.603 1 36.11 ? O3 GOL 342 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 6 #