data_3GT2
#
_model_server_result.job_id            YQoH9e_YcMfetFFVQyb6pw 
_model_server_result.datetime_utc      '2025-02-11 16:34:58' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3gt2 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":208}' 
#
_entry.id    3GT2 
#
_exptl.entry_id    3GT2 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          102.95 
_cell.angle_gamma         90 
_cell.entry_id            3GT2 
_cell.length_a            34.715 
_cell.length_b            53.212 
_cell.length_c            38.325 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3GT2 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C ALA 9 A ALA 72 1_555 A N MSE 10 A MSE 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale2 A C MSE 10 A MSE 73 1_555 A N ASP 11 A ASP 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale3 A C LEU 59 A LEU 122 1_555 A N MSE 60 A MSE 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale4 A C MSE 60 A MSE 123 1_555 A N GLN 61 A GLN 124 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale5 A C ALA 77 A ALA 140 1_555 A N MSE 78 A MSE 141 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale6 A C MSE 78 A MSE 141 1_555 A N TYR 79 A TYR 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale7 A C ALA 107 A ALA 170 1_555 A N MSE 108 A MSE 171 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? 
covale ? covale8 A C MSE 108 A MSE 171 1_555 A N TYR 109 A TYR 172 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale9 A C GLN 114 A GLN 177 1_555 A N MSE 115 A MSE 178 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale10 A C MSE 115 A MSE 178 1_555 A N LEU 116 A LEU 179 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? 
covale ? covale11 A C GLY 131 A GLY 194 1_555 A N MSE 132 A MSE 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale12 A C MSE 132 A MSE 195 1_555 A N ALA 133 A ALA 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? 
covale ? covale13 A C TYR 135 A TYR 198 1_555 A N MSE 136 A MSE 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? 
covale ? covale14 A C MSE 136 A MSE 199 1_555 A N VAL 137 A VAL 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 70 n n 
C1 C2 EDO sing 71 n n 
C1 H11 EDO sing 72 n n 
C1 H12 EDO sing 73 n n 
O1 HO1 EDO sing 74 n n 
C2 O2 EDO sing 75 n n 
C2 H21 EDO sing 76 n n 
C2 H22 EDO sing 77 n n 
O2 HO2 EDO sing 78 n n 
#
_atom_sites.entry_id                     3GT2 
_atom_sites.fract_transf_matrix[1][1]    0.028806 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.006624 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018793 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.026774 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SO4 A 1 206 206 SO4 SO4 . 
C 2 SO4 A 1 207 207 SO4 SO4 . 
D 3 EDO A 1 208 208 EDO EDO . 
E 3 EDO A 1 209 209 EDO EDO . 
F 4 HOH A 1 210 210 HOH HOH . 
F 4 HOH A 2 211 211 HOH HOH . 
F 4 HOH A 3 212 212 HOH HOH . 
F 4 HOH A 4 213 213 HOH HOH . 
F 4 HOH A 5 214 214 HOH HOH . 
F 4 HOH A 6 215 215 HOH HOH . 
F 4 HOH A 7 216 216 HOH HOH . 
F 4 HOH A 8 217 217 HOH HOH . 
F 4 HOH A 9 218 218 HOH HOH . 
F 4 HOH A 10 219 219 HOH HOH . 
F 4 HOH A 11 220 220 HOH HOH . 
F 4 HOH A 12 221 221 HOH HOH . 
F 4 HOH A 13 222 222 HOH HOH . 
F 4 HOH A 14 223 223 HOH HOH . 
F 4 HOH A 15 224 224 HOH HOH . 
F 4 HOH A 16 225 225 HOH HOH . 
F 4 HOH A 17 226 226 HOH HOH . 
F 4 HOH A 18 227 227 HOH HOH . 
F 4 HOH A 19 228 228 HOH HOH . 
F 4 HOH A 20 229 229 HOH HOH . 
F 4 HOH A 21 230 230 HOH HOH . 
F 4 HOH A 22 231 231 HOH HOH . 
F 4 HOH A 23 232 232 HOH HOH . 
F 4 HOH A 24 233 233 HOH HOH . 
F 4 HOH A 25 234 234 HOH HOH . 
F 4 HOH A 26 235 235 HOH HOH . 
F 4 HOH A 27 236 236 HOH HOH . 
F 4 HOH A 28 237 237 HOH HOH . 
F 4 HOH A 29 238 238 HOH HOH . 
F 4 HOH A 30 239 239 HOH HOH . 
F 4 HOH A 31 240 240 HOH HOH . 
F 4 HOH A 32 241 241 HOH HOH . 
F 4 HOH A 33 242 242 HOH HOH . 
F 4 HOH A 34 243 243 HOH HOH . 
F 4 HOH A 35 244 244 HOH HOH . 
F 4 HOH A 36 245 245 HOH HOH . 
F 4 HOH A 37 246 246 HOH HOH . 
F 4 HOH A 38 247 247 HOH HOH . 
F 4 HOH A 39 248 248 HOH HOH . 
F 4 HOH A 40 249 249 HOH HOH . 
F 4 HOH A 41 250 250 HOH HOH . 
F 4 HOH A 42 251 251 HOH HOH . 
F 4 HOH A 43 252 252 HOH HOH . 
F 4 HOH A 44 253 253 HOH HOH . 
F 4 HOH A 45 254 254 HOH HOH . 
F 4 HOH A 46 255 255 HOH HOH . 
F 4 HOH A 47 256 256 HOH HOH . 
F 4 HOH A 48 257 257 HOH HOH . 
F 4 HOH A 49 258 258 HOH HOH . 
F 4 HOH A 50 259 259 HOH HOH . 
F 4 HOH A 51 260 260 HOH HOH . 
F 4 HOH A 52 261 261 HOH HOH . 
F 4 HOH A 53 262 262 HOH HOH . 
F 4 HOH A 54 263 263 HOH HOH . 
F 4 HOH A 55 264 264 HOH HOH . 
F 4 HOH A 56 265 265 HOH HOH . 
F 4 HOH A 57 266 266 HOH HOH . 
F 4 HOH A 58 267 267 HOH HOH . 
F 4 HOH A 59 268 268 HOH HOH . 
F 4 HOH A 60 269 269 HOH HOH . 
F 4 HOH A 61 270 270 HOH HOH . 
F 4 HOH A 62 271 271 HOH HOH . 
F 4 HOH A 63 272 272 HOH HOH . 
F 4 HOH A 64 273 273 HOH HOH . 
F 4 HOH A 65 274 274 HOH HOH . 
F 4 HOH A 66 275 275 HOH HOH . 
F 4 HOH A 67 276 276 HOH HOH . 
F 4 HOH A 68 277 277 HOH HOH . 
F 4 HOH A 69 278 278 HOH HOH . 
F 4 HOH A 70 279 279 HOH HOH . 
F 4 HOH A 71 280 280 HOH HOH . 
F 4 HOH A 72 281 281 HOH HOH . 
F 4 HOH A 73 282 282 HOH HOH . 
F 4 HOH A 74 283 283 HOH HOH . 
F 4 HOH A 75 284 284 HOH HOH . 
F 4 HOH A 76 285 285 HOH HOH . 
F 4 HOH A 77 286 286 HOH HOH . 
F 4 HOH A 78 287 287 HOH HOH . 
F 4 HOH A 79 288 288 HOH HOH . 
F 4 HOH A 80 289 289 HOH HOH . 
F 4 HOH A 81 290 290 HOH HOH . 
F 4 HOH A 82 291 291 HOH HOH . 
F 4 HOH A 83 292 292 HOH HOH . 
F 4 HOH A 84 293 293 HOH HOH . 
F 4 HOH A 85 294 294 HOH HOH . 
F 4 HOH A 86 295 295 HOH HOH . 
F 4 HOH A 87 296 296 HOH HOH . 
F 4 HOH A 88 297 297 HOH HOH . 
F 4 HOH A 89 298 298 HOH HOH . 
F 4 HOH A 90 299 299 HOH HOH . 
F 4 HOH A 91 300 300 HOH HOH . 
F 4 HOH A 92 301 301 HOH HOH . 
F 4 HOH A 93 302 302 HOH HOH . 
F 4 HOH A 94 303 303 HOH HOH . 
F 4 HOH A 95 304 304 HOH HOH . 
F 4 HOH A 96 305 305 HOH HOH . 
F 4 HOH A 97 306 306 HOH HOH . 
F 4 HOH A 98 307 307 HOH HOH . 
F 4 HOH A 99 308 308 HOH HOH . 
F 4 HOH A 100 309 309 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . D 3 -6.137 49.144 29.615 1 45.2 ? C1 EDO 208 A 1 
HETATM 2 O O1 EDO . . . D 3 -4.759 49.371 29.508 1 49.95 ? O1 EDO 208 A 1 
HETATM 3 C C2 EDO . . . D 3 -7.055 49.944 28.693 1 44.61 ? C2 EDO 208 A 1 
HETATM 4 O O2 EDO . . . D 3 -7.624 49.283 27.594 1 47.93 ? O2 EDO 208 A 1 
HETATM 5 H H11 EDO . . . D 3 -6.315 48.09 29.427 1 54.19 ? H11 EDO 208 A 1 
HETATM 6 H H12 EDO . . . D 3 -6.429 49.355 30.638 1 54.19 ? H12 EDO 208 A 1 
HETATM 7 H HO1 EDO . . . D 3 -4.309 48.545 29.427 1 59.9 ? HO1 EDO 208 A 1 
HETATM 8 H H21 EDO . . . D 3 -7.867 50.336 29.297 1 53.49 ? H21 EDO 208 A 1 
HETATM 9 H H22 EDO . . . D 3 -6.486 50.785 28.312 1 53.49 ? H22 EDO 208 A 1 
HETATM 10 H HO2 EDO . . . D 3 -8.377 49.765 27.292 1 57.47 ? HO2 EDO 208 A 1 
#
_model_server_stats.io_time_ms              53 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           316 
_model_server_stats.encode_time_ms          17 
_model_server_stats.element_count           10 
#