data_3GTA # _model_server_result.job_id W2b3tTyz0gMQd3KnBK9O_Q _model_server_result.datetime_utc '2024-12-26 23:11:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3gta # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":173}' # _entry.id 3GTA # _exptl.entry_id 3GTA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 209.24 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3GTA _cell.length_a 87.48 _cell.length_b 87.48 _cell.length_c 74.027 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3GTA _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,K 1 1 B,E,F,G,H,I,J,L 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id H _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 85 A CYS 124 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.336 ? metalc ? metalc2 A SG CYS 88 A CYS 127 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? metalc ? metalc3 A NE2 HIS 105 A HIS 144 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.108 ? metalc ? metalc4 A SG CYS 112 A CYS 151 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? metalc ? metalc5 B O SER 54 B SER 93 1_555 F LI LI . B LI 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.877 ? metalc ? metalc6 B OD1 ASP 57 B ASP 96 1_555 F LI LI . B LI 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.834 ? metalc ? metalc7 B ND1 HIS 76 B HIS 115 1_555 F LI LI . B LI 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.955 ? metalc ? metalc8 B SG CYS 85 B CYS 124 1_555 E ZN ZN . B ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.335 ? metalc ? metalc9 B SG CYS 88 B CYS 127 1_555 E ZN ZN . B ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.338 ? metalc ? metalc10 B NE2 HIS 105 B HIS 144 1_555 E ZN ZN . B ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.139 ? metalc ? metalc11 B SG CYS 112 B CYS 151 1_555 E ZN ZN . B ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.322 ? metalc ? metalc12 I O2 EDO . B EDO 174 1_555 F LI LI . B LI 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.848 ? # _chem_comp.formula 'C8 H19 N O5' _chem_comp.formula_weight 209.24 _chem_comp.id BTB _chem_comp.mon_nstd_flag . _chem_comp.name 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'BIS-TRIS BUFFER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 BTB sing 146 n n C1 C2 BTB sing 147 n n C1 H11 BTB sing 148 n n C1 H12 BTB sing 149 n n O1 HO1 BTB sing 150 n n C2 C3 BTB sing 151 n n C2 C4 BTB sing 152 n n C2 N BTB sing 153 n n C3 O3 BTB sing 154 n n C3 H31 BTB sing 155 n n C3 H32 BTB sing 156 n n O3 HO3 BTB sing 157 n n C4 O4 BTB sing 158 n n C4 H41 BTB sing 159 n n C4 H42 BTB sing 160 n n O4 HO4 BTB sing 161 n n N C5 BTB sing 162 n n N C7 BTB sing 163 n n C5 C6 BTB sing 164 n n C5 H51 BTB sing 165 n n C5 H52 BTB sing 166 n n C6 O6 BTB sing 167 n n C6 H61 BTB sing 168 n n C6 H62 BTB sing 169 n n O6 HO6 BTB sing 170 n n C7 C8 BTB sing 171 n n C7 H71 BTB sing 172 n n C7 H72 BTB sing 173 n n C8 O8 BTB sing 174 n n C8 H81 BTB sing 175 n n C8 H82 BTB sing 176 n n O8 HO8 BTB sing 177 n n # _atom_sites.entry_id 3GTA _atom_sites.fract_transf_matrix[1][1] 0.011431 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011431 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013509 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 1001 1001 ZN ZN . D 3 851 A 1 1 1 851 851 . E 2 ZN B 1 1001 1001 ZN ZN . F 4 LI B 1 1002 1002 LI LI . G 3 851 B 1 1 1 851 851 . H 5 BTB B 1 173 1 BTB BTB . I 6 EDO B 1 174 101 EDO EDO . J 6 EDO B 1 175 102 EDO EDO . K 7 HOH A 1 3 3 HOH HOH . K 7 HOH A 2 5 5 HOH HOH . K 7 HOH A 3 6 6 HOH HOH . K 7 HOH A 4 8 8 HOH HOH . K 7 HOH A 5 10 10 HOH HOH . K 7 HOH A 6 12 12 HOH HOH . K 7 HOH A 7 14 14 HOH HOH . K 7 HOH A 8 15 15 HOH HOH . K 7 HOH A 9 16 16 HOH HOH . K 7 HOH A 10 17 17 HOH HOH . K 7 HOH A 11 18 18 HOH HOH . K 7 HOH A 12 19 19 HOH HOH . K 7 HOH A 13 21 21 HOH HOH . K 7 HOH A 14 22 22 HOH HOH . K 7 HOH A 15 25 25 HOH HOH . K 7 HOH A 16 28 28 HOH HOH . K 7 HOH A 17 29 29 HOH HOH . K 7 HOH A 18 30 30 HOH HOH . K 7 HOH A 19 34 34 HOH HOH . K 7 HOH A 20 35 35 HOH HOH . K 7 HOH A 21 36 36 HOH HOH . K 7 HOH A 22 39 39 HOH HOH . K 7 HOH A 23 173 1 HOH HOH . K 7 HOH A 24 174 42 HOH HOH . K 7 HOH A 25 175 43 HOH HOH . K 7 HOH A 26 176 46 HOH HOH . K 7 HOH A 27 177 177 HOH HOH . K 7 HOH A 28 178 44 HOH HOH . K 7 HOH A 29 179 45 HOH HOH . K 7 HOH A 30 180 180 HOH HOH . K 7 HOH A 31 181 181 HOH HOH . K 7 HOH A 32 182 47 HOH HOH . K 7 HOH A 33 183 48 HOH HOH . K 7 HOH A 34 184 49 HOH HOH . K 7 HOH A 35 185 185 HOH HOH . K 7 HOH A 36 186 186 HOH HOH . K 7 HOH A 37 187 187 HOH HOH . K 7 HOH A 38 188 188 HOH HOH . K 7 HOH A 39 189 50 HOH HOH . K 7 HOH A 40 190 190 HOH HOH . K 7 HOH A 41 191 57 HOH HOH . K 7 HOH A 42 192 61 HOH HOH . K 7 HOH A 43 193 63 HOH HOH . K 7 HOH A 44 194 65 HOH HOH . K 7 HOH A 45 195 195 HOH HOH . K 7 HOH A 46 196 196 HOH HOH . K 7 HOH A 47 197 197 HOH HOH . K 7 HOH A 48 198 198 HOH HOH . K 7 HOH A 49 199 199 HOH HOH . K 7 HOH A 50 200 200 HOH HOH . K 7 HOH A 51 201 201 HOH HOH . K 7 HOH A 52 202 69 HOH HOH . K 7 HOH A 53 203 203 HOH HOH . K 7 HOH A 54 204 71 HOH HOH . K 7 HOH A 55 205 72 HOH HOH . K 7 HOH A 56 206 74 HOH HOH . K 7 HOH A 57 207 75 HOH HOH . K 7 HOH A 58 208 208 HOH HOH . K 7 HOH A 59 209 77 HOH HOH . K 7 HOH A 60 210 82 HOH HOH . K 7 HOH A 61 211 211 HOH HOH . K 7 HOH A 62 212 84 HOH HOH . K 7 HOH A 63 213 213 HOH HOH . K 7 HOH A 64 214 85 HOH HOH . K 7 HOH A 65 215 86 HOH HOH . K 7 HOH A 66 216 88 HOH HOH . K 7 HOH A 67 217 91 HOH HOH . K 7 HOH A 68 218 92 HOH HOH . K 7 HOH A 69 219 93 HOH HOH . K 7 HOH A 70 220 96 HOH HOH . K 7 HOH A 71 221 102 HOH HOH . K 7 HOH A 72 222 104 HOH HOH . K 7 HOH A 73 223 105 HOH HOH . K 7 HOH A 74 224 106 HOH HOH . K 7 HOH A 75 225 107 HOH HOH . K 7 HOH A 76 226 110 HOH HOH . K 7 HOH A 77 227 111 HOH HOH . K 7 HOH A 78 228 112 HOH HOH . K 7 HOH A 79 229 113 HOH HOH . K 7 HOH A 80 230 115 HOH HOH . K 7 HOH A 81 231 117 HOH HOH . K 7 HOH A 82 232 119 HOH HOH . K 7 HOH A 83 233 121 HOH HOH . K 7 HOH A 84 234 123 HOH HOH . K 7 HOH A 85 235 124 HOH HOH . K 7 HOH A 86 236 125 HOH HOH . K 7 HOH A 87 237 126 HOH HOH . K 7 HOH A 88 238 127 HOH HOH . K 7 HOH A 89 239 128 HOH HOH . K 7 HOH A 90 240 131 HOH HOH . K 7 HOH A 91 241 132 HOH HOH . K 7 HOH A 92 242 133 HOH HOH . K 7 HOH A 93 243 135 HOH HOH . K 7 HOH A 94 244 137 HOH HOH . K 7 HOH A 95 245 138 HOH HOH . K 7 HOH A 96 246 141 HOH HOH . K 7 HOH A 97 247 142 HOH HOH . K 7 HOH A 98 248 147 HOH HOH . K 7 HOH A 99 249 150 HOH HOH . K 7 HOH A 100 250 153 HOH HOH . K 7 HOH A 101 251 154 HOH HOH . K 7 HOH A 102 252 155 HOH HOH . K 7 HOH A 103 253 159 HOH HOH . K 7 HOH A 104 254 162 HOH HOH . K 7 HOH A 105 255 170 HOH HOH . K 7 HOH A 106 256 172 HOH HOH . K 7 HOH A 107 257 100 HOH HOH . K 7 HOH A 108 260 174 HOH HOH . L 7 HOH B 1 2 2 HOH HOH . L 7 HOH B 2 4 4 HOH HOH . L 7 HOH B 3 7 7 HOH HOH . L 7 HOH B 4 9 9 HOH HOH . L 7 HOH B 5 11 11 HOH HOH . L 7 HOH B 6 13 13 HOH HOH . L 7 HOH B 7 20 20 HOH HOH . L 7 HOH B 8 23 23 HOH HOH . L 7 HOH B 9 24 24 HOH HOH . L 7 HOH B 10 26 26 HOH HOH . L 7 HOH B 11 27 27 HOH HOH . L 7 HOH B 12 31 31 HOH HOH . L 7 HOH B 13 32 32 HOH HOH . L 7 HOH B 14 33 33 HOH HOH . L 7 HOH B 15 37 37 HOH HOH . L 7 HOH B 16 38 38 HOH HOH . L 7 HOH B 17 176 176 HOH HOH . L 7 HOH B 18 177 41 HOH HOH . L 7 HOH B 19 178 178 HOH HOH . L 7 HOH B 20 179 179 HOH HOH . L 7 HOH B 21 180 40 HOH HOH . L 7 HOH B 22 181 51 HOH HOH . L 7 HOH B 23 182 182 HOH HOH . L 7 HOH B 24 183 183 HOH HOH . L 7 HOH B 25 184 184 HOH HOH . L 7 HOH B 26 185 52 HOH HOH . L 7 HOH B 27 186 53 HOH HOH . L 7 HOH B 28 187 54 HOH HOH . L 7 HOH B 29 188 55 HOH HOH . L 7 HOH B 30 189 56 HOH HOH . L 7 HOH B 31 190 58 HOH HOH . L 7 HOH B 32 191 59 HOH HOH . L 7 HOH B 33 192 60 HOH HOH . L 7 HOH B 34 193 193 HOH HOH . L 7 HOH B 35 194 194 HOH HOH . L 7 HOH B 36 195 62 HOH HOH . L 7 HOH B 37 196 64 HOH HOH . L 7 HOH B 38 197 66 HOH HOH . L 7 HOH B 39 198 67 HOH HOH . L 7 HOH B 40 199 68 HOH HOH . L 7 HOH B 41 200 70 HOH HOH . L 7 HOH B 42 201 73 HOH HOH . L 7 HOH B 43 202 76 HOH HOH . L 7 HOH B 44 203 78 HOH HOH . L 7 HOH B 45 204 204 HOH HOH . L 7 HOH B 46 205 205 HOH HOH . L 7 HOH B 47 206 206 HOH HOH . L 7 HOH B 48 207 207 HOH HOH . L 7 HOH B 49 208 79 HOH HOH . L 7 HOH B 50 209 80 HOH HOH . L 7 HOH B 51 210 81 HOH HOH . L 7 HOH B 52 211 83 HOH HOH . L 7 HOH B 53 212 212 HOH HOH . L 7 HOH B 54 213 87 HOH HOH . L 7 HOH B 55 214 214 HOH HOH . L 7 HOH B 56 215 89 HOH HOH . L 7 HOH B 57 216 90 HOH HOH . L 7 HOH B 58 217 94 HOH HOH . L 7 HOH B 59 218 95 HOH HOH . L 7 HOH B 60 219 97 HOH HOH . L 7 HOH B 61 220 98 HOH HOH . L 7 HOH B 62 221 99 HOH HOH . L 7 HOH B 63 223 101 HOH HOH . L 7 HOH B 64 224 103 HOH HOH . L 7 HOH B 65 225 108 HOH HOH . L 7 HOH B 66 226 109 HOH HOH . L 7 HOH B 67 227 114 HOH HOH . L 7 HOH B 68 228 116 HOH HOH . L 7 HOH B 69 229 118 HOH HOH . L 7 HOH B 70 230 120 HOH HOH . L 7 HOH B 71 231 122 HOH HOH . L 7 HOH B 72 232 129 HOH HOH . L 7 HOH B 73 233 130 HOH HOH . L 7 HOH B 74 234 134 HOH HOH . L 7 HOH B 75 235 136 HOH HOH . L 7 HOH B 76 236 139 HOH HOH . L 7 HOH B 77 237 140 HOH HOH . L 7 HOH B 78 238 143 HOH HOH . L 7 HOH B 79 239 144 HOH HOH . L 7 HOH B 80 240 145 HOH HOH . L 7 HOH B 81 241 146 HOH HOH . L 7 HOH B 82 242 148 HOH HOH . L 7 HOH B 83 243 149 HOH HOH . L 7 HOH B 84 244 151 HOH HOH . L 7 HOH B 85 245 152 HOH HOH . L 7 HOH B 86 246 156 HOH HOH . L 7 HOH B 87 247 157 HOH HOH . L 7 HOH B 88 248 158 HOH HOH . L 7 HOH B 89 249 160 HOH HOH . L 7 HOH B 90 250 161 HOH HOH . L 7 HOH B 91 251 163 HOH HOH . L 7 HOH B 92 252 164 HOH HOH . L 7 HOH B 93 253 165 HOH HOH . L 7 HOH B 94 254 166 HOH HOH . L 7 HOH B 95 255 167 HOH HOH . L 7 HOH B 96 256 168 HOH HOH . L 7 HOH B 97 257 169 HOH HOH . L 7 HOH B 98 258 171 HOH HOH . L 7 HOH B 99 259 173 HOH HOH . L 7 HOH B 100 261 175 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BTB . . . H 5 69.232 48.328 59.711 1 46.93 ? C1 BTB 173 B 1 HETATM 2 O O1 BTB . . . H 5 69.005 49.32 60.701 1 47.95 ? O1 BTB 173 B 1 HETATM 3 C C2 BTB . . . H 5 69.63 48.962 58.375 1 46.45 ? C2 BTB 173 B 1 HETATM 4 C C3 BTB . . . H 5 70.223 47.866 57.491 1 45.49 ? C3 BTB 173 B 1 HETATM 5 O O3 BTB . . . H 5 70.763 48.382 56.283 1 43.11 ? O3 BTB 173 B 1 HETATM 6 C C4 BTB . . . H 5 68.359 49.5 57.713 1 47 ? C4 BTB 173 B 1 HETATM 7 O O4 BTB . . . H 5 67.369 48.493 57.541 1 48.22 ? O4 BTB 173 B 1 HETATM 8 N N BTB . . . H 5 70.659 50.005 58.59 1 45.94 ? N BTB 173 B 1 HETATM 9 C C5 BTB . . . H 5 71.918 49.592 59.236 1 45.8 ? C5 BTB 173 B 1 HETATM 10 C C6 BTB . . . H 5 72.392 50.662 60.225 1 46.46 ? C6 BTB 173 B 1 HETATM 11 O O6 BTB . . . H 5 71.604 50.649 61.405 1 46.3 ? O6 BTB 173 B 1 HETATM 12 C C7 BTB . . . H 5 70.784 51.119 57.633 1 45.43 ? C7 BTB 173 B 1 HETATM 13 C C8 BTB . . . H 5 69.945 52.317 58.089 1 45.22 ? C8 BTB 173 B 1 HETATM 14 O O8 BTB . . . H 5 69.87 52.407 59.504 1 45.72 ? O8 BTB 173 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 354 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 14 #