data_3GV4 # _model_server_result.job_id 6I7h7yjeEHQCCDMmVF5Sqg _model_server_result.datetime_utc '2024-12-23 19:53:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3gv4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":202}' # _entry.id 3GV4 # _exptl.entry_id 3GV4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3GV4 _cell.length_a 31.657 _cell.length_b 36.093 _cell.length_c 88.998 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3GV4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 5 A CYS 5 1_555 E ZN ZN . A ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? metalc ? metalc2 A ND1 HIS 7 A HIS 7 1_555 E ZN ZN . A ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.137 ? metalc ? metalc3 A SG CYS 25 A CYS 25 1_555 D ZN ZN . A ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.368 ? metalc ? metalc4 A SG CYS 28 A CYS 28 1_555 D ZN ZN . A ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.344 ? metalc ? metalc5 A SG CYS 37 A CYS 37 1_555 C ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.349 ? metalc ? metalc6 A SG CYS 40 A CYS 40 1_555 C ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.27 ? metalc ? metalc7 A SG CYS 45 A CYS 45 1_555 D ZN ZN . A ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.385 ? metalc ? metalc8 A ND1 HIS 52 A HIS 52 1_555 D ZN ZN . A ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? metalc ? metalc9 A NE2 HIS 56 A HIS 56 1_555 C ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? metalc ? metalc10 A ND1 HIS 62 A HIS 62 1_555 C ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.112 ? metalc ? metalc11 A SG CYS 75 A CYS 75 1_555 E ZN ZN . A ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? metalc ? metalc12 A SG CYS 78 A CYS 78 1_555 E ZN ZN . A ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.265 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3GV4 _atom_sites.fract_transf_matrix[1][1] 0.031589 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.027706 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011236 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN A 1 201 201 ZN ZN . D 3 ZN A 1 202 202 ZN ZN . E 3 ZN A 1 203 203 ZN ZN . F 4 CA A 1 300 300 CA CA . G 5 HOH A 1 108 108 HOH HOH . G 5 HOH A 2 109 109 HOH HOH . G 5 HOH A 3 110 110 HOH HOH . G 5 HOH A 4 111 111 HOH HOH . G 5 HOH A 5 112 112 HOH HOH . G 5 HOH A 6 113 113 HOH HOH . G 5 HOH A 7 114 114 HOH HOH . G 5 HOH A 8 115 115 HOH HOH . G 5 HOH A 9 116 116 HOH HOH . G 5 HOH A 10 117 117 HOH HOH . G 5 HOH A 11 118 1 HOH HOH . G 5 HOH A 12 119 2 HOH HOH . G 5 HOH A 13 120 120 HOH HOH . G 5 HOH A 14 121 121 HOH HOH . G 5 HOH A 15 122 122 HOH HOH . G 5 HOH A 16 123 123 HOH HOH . G 5 HOH A 17 124 124 HOH HOH . G 5 HOH A 18 125 125 HOH HOH . G 5 HOH A 19 126 126 HOH HOH . G 5 HOH A 20 127 127 HOH HOH . G 5 HOH A 21 128 128 HOH HOH . G 5 HOH A 22 129 129 HOH HOH . G 5 HOH A 23 130 130 HOH HOH . G 5 HOH A 24 131 131 HOH HOH . G 5 HOH A 25 132 132 HOH HOH . G 5 HOH A 26 133 4 HOH HOH . G 5 HOH A 27 134 134 HOH HOH . G 5 HOH A 28 135 135 HOH HOH . G 5 HOH A 29 136 136 HOH HOH . G 5 HOH A 30 137 137 HOH HOH . G 5 HOH A 31 138 138 HOH HOH . G 5 HOH A 32 139 139 HOH HOH . G 5 HOH A 33 140 5 HOH HOH . G 5 HOH A 34 141 6 HOH HOH . G 5 HOH A 35 142 7 HOH HOH . G 5 HOH A 36 143 143 HOH HOH . G 5 HOH A 37 144 144 HOH HOH . G 5 HOH A 38 145 145 HOH HOH . G 5 HOH A 39 146 146 HOH HOH . G 5 HOH A 40 147 147 HOH HOH . G 5 HOH A 41 148 148 HOH HOH . G 5 HOH A 42 149 149 HOH HOH . G 5 HOH A 43 150 150 HOH HOH . G 5 HOH A 44 151 8 HOH HOH . G 5 HOH A 45 152 152 HOH HOH . G 5 HOH A 46 153 153 HOH HOH . G 5 HOH A 47 154 154 HOH HOH . G 5 HOH A 48 155 155 HOH HOH . G 5 HOH A 49 156 156 HOH HOH . G 5 HOH A 50 157 9 HOH HOH . G 5 HOH A 51 158 10 HOH HOH . G 5 HOH A 52 159 11 HOH HOH . G 5 HOH A 53 160 160 HOH HOH . G 5 HOH A 54 161 12 HOH HOH . G 5 HOH A 55 162 162 HOH HOH . G 5 HOH A 56 163 163 HOH HOH . G 5 HOH A 57 164 164 HOH HOH . G 5 HOH A 58 165 165 HOH HOH . G 5 HOH A 59 166 166 HOH HOH . G 5 HOH A 60 167 13 HOH HOH . G 5 HOH A 61 168 168 HOH HOH . G 5 HOH A 62 169 169 HOH HOH . G 5 HOH A 63 170 170 HOH HOH . G 5 HOH A 64 171 171 HOH HOH . G 5 HOH A 65 172 172 HOH HOH . G 5 HOH A 66 173 173 HOH HOH . G 5 HOH A 67 174 14 HOH HOH . G 5 HOH A 68 175 175 HOH HOH . G 5 HOH A 69 176 176 HOH HOH . G 5 HOH A 70 177 177 HOH HOH . G 5 HOH A 71 178 15 HOH HOH . G 5 HOH A 72 179 179 HOH HOH . G 5 HOH A 73 180 180 HOH HOH . G 5 HOH A 74 181 16 HOH HOH . G 5 HOH A 75 182 182 HOH HOH . G 5 HOH A 76 183 183 HOH HOH . G 5 HOH A 77 184 17 HOH HOH . G 5 HOH A 78 185 185 HOH HOH . G 5 HOH A 79 186 18 HOH HOH . G 5 HOH A 80 187 187 HOH HOH . G 5 HOH A 81 188 19 HOH HOH . G 5 HOH A 82 189 20 HOH HOH . G 5 HOH A 83 190 190 HOH HOH . G 5 HOH A 84 191 21 HOH HOH . G 5 HOH A 85 192 192 HOH HOH . G 5 HOH A 86 193 193 HOH HOH . G 5 HOH A 87 194 194 HOH HOH . G 5 HOH A 88 195 22 HOH HOH . G 5 HOH A 89 196 196 HOH HOH . G 5 HOH A 90 197 197 HOH HOH . G 5 HOH A 91 198 198 HOH HOH . G 5 HOH A 92 199 23 HOH HOH . G 5 HOH A 93 200 24 HOH HOH . G 5 HOH A 94 204 204 HOH HOH . G 5 HOH A 95 205 25 HOH HOH . G 5 HOH A 96 206 26 HOH HOH . G 5 HOH A 97 207 27 HOH HOH . G 5 HOH A 98 208 30 HOH HOH . G 5 HOH A 99 209 31 HOH HOH . G 5 HOH A 100 210 32 HOH HOH . G 5 HOH A 101 211 33 HOH HOH . G 5 HOH A 102 212 34 HOH HOH . G 5 HOH A 103 213 213 HOH HOH . G 5 HOH A 104 214 35 HOH HOH . G 5 HOH A 105 215 36 HOH HOH . G 5 HOH A 106 216 38 HOH HOH . G 5 HOH A 107 217 217 HOH HOH . G 5 HOH A 108 218 39 HOH HOH . G 5 HOH A 109 219 41 HOH HOH . G 5 HOH A 110 220 42 HOH HOH . G 5 HOH A 111 221 43 HOH HOH . G 5 HOH A 112 222 222 HOH HOH . G 5 HOH A 113 223 45 HOH HOH . G 5 HOH A 114 224 224 HOH HOH . G 5 HOH A 115 225 47 HOH HOH . G 5 HOH A 116 226 48 HOH HOH . G 5 HOH A 117 227 49 HOH HOH . G 5 HOH A 118 228 50 HOH HOH . G 5 HOH A 119 229 52 HOH HOH . G 5 HOH A 120 230 53 HOH HOH . G 5 HOH A 121 231 231 HOH HOH . G 5 HOH A 122 232 54 HOH HOH . G 5 HOH A 123 233 55 HOH HOH . G 5 HOH A 124 234 56 HOH HOH . G 5 HOH A 125 235 57 HOH HOH . G 5 HOH A 126 236 58 HOH HOH . G 5 HOH A 127 237 59 HOH HOH . G 5 HOH A 128 238 238 HOH HOH . G 5 HOH A 129 239 239 HOH HOH . G 5 HOH A 130 240 240 HOH HOH . G 5 HOH A 131 241 241 HOH HOH . G 5 HOH A 132 242 242 HOH HOH . G 5 HOH A 133 243 243 HOH HOH . G 5 HOH A 134 244 244 HOH HOH . G 5 HOH A 135 245 245 HOH HOH . G 5 HOH A 136 246 246 HOH HOH . G 5 HOH A 137 247 247 HOH HOH . G 5 HOH A 138 248 60 HOH HOH . G 5 HOH A 139 249 249 HOH HOH . G 5 HOH A 140 250 250 HOH HOH . G 5 HOH A 141 251 251 HOH HOH . G 5 HOH A 142 252 61 HOH HOH . G 5 HOH A 143 253 253 HOH HOH . G 5 HOH A 144 254 254 HOH HOH . G 5 HOH A 145 255 255 HOH HOH . G 5 HOH A 146 256 256 HOH HOH . G 5 HOH A 147 257 257 HOH HOH . G 5 HOH A 148 258 258 HOH HOH . G 5 HOH A 149 259 259 HOH HOH . G 5 HOH A 150 260 260 HOH HOH . G 5 HOH A 151 261 261 HOH HOH . G 5 HOH A 152 262 262 HOH HOH . G 5 HOH A 153 263 263 HOH HOH . G 5 HOH A 154 264 264 HOH HOH . G 5 HOH A 155 265 265 HOH HOH . G 5 HOH A 156 266 266 HOH HOH . G 5 HOH A 157 267 62 HOH HOH . G 5 HOH A 158 268 63 HOH HOH . G 5 HOH A 159 269 64 HOH HOH . G 5 HOH A 160 270 65 HOH HOH . G 5 HOH A 161 271 66 HOH HOH . G 5 HOH A 162 272 67 HOH HOH . G 5 HOH A 163 273 68 HOH HOH . G 5 HOH A 164 274 69 HOH HOH . G 5 HOH A 165 275 70 HOH HOH . G 5 HOH A 166 276 71 HOH HOH . G 5 HOH A 167 277 73 HOH HOH . G 5 HOH A 168 278 74 HOH HOH . G 5 HOH A 169 279 75 HOH HOH . G 5 HOH A 170 280 76 HOH HOH . G 5 HOH A 171 281 77 HOH HOH . G 5 HOH A 172 282 78 HOH HOH . G 5 HOH A 173 283 79 HOH HOH . G 5 HOH A 174 284 80 HOH HOH . G 5 HOH A 175 285 81 HOH HOH . G 5 HOH A 176 286 82 HOH HOH . G 5 HOH A 177 287 83 HOH HOH . G 5 HOH A 178 288 85 HOH HOH . G 5 HOH A 179 289 86 HOH HOH . G 5 HOH A 180 290 87 HOH HOH . G 5 HOH A 181 291 88 HOH HOH . G 5 HOH A 182 292 89 HOH HOH . G 5 HOH A 183 293 91 HOH HOH . G 5 HOH A 184 294 92 HOH HOH . G 5 HOH A 185 295 93 HOH HOH . G 5 HOH A 186 296 94 HOH HOH . G 5 HOH A 187 297 95 HOH HOH . G 5 HOH A 188 298 99 HOH HOH . G 5 HOH A 189 299 100 HOH HOH . G 5 HOH A 190 301 101 HOH HOH . G 5 HOH A 191 302 102 HOH HOH . G 5 HOH A 192 303 103 HOH HOH . G 5 HOH A 193 304 104 HOH HOH . G 5 HOH A 194 305 105 HOH HOH . G 5 HOH A 195 306 106 HOH HOH . G 5 HOH A 196 307 107 HOH HOH . G 5 HOH A 197 308 202 HOH HOH . G 5 HOH A 198 309 72 HOH HOH . G 5 HOH A 199 310 97 HOH HOH . G 5 HOH A 200 311 158 HOH HOH . G 5 HOH A 201 312 248 HOH HOH . G 5 HOH A 202 313 252 HOH HOH . H 5 HOH H 1 3 3 HOH HOH . H 5 HOH H 2 28 28 HOH HOH . H 5 HOH H 3 90 90 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x -9.901 _atom_site.Cartn_y 10.396 _atom_site.Cartn_z -14.63 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 19.29 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 202 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 265 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #