data_3GVX # _model_server_result.job_id DhnVM5ohbDCqbx-ePjeAWA _model_server_result.datetime_utc '2024-11-29 13:27:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3gvx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":291}' # _entry.id 3GVX # _exptl.entry_id 3GVX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 39.098 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'POTASSIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3GVX _cell.length_a 66.512 _cell.length_b 77.842 _cell.length_c 152.654 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3GVX _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C LYS 51 A LYS 51 1_555 A N MSE 52 A MSE 52 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale2 A C MSE 52 A MSE 52 1_555 A N ILE 53 A ILE 53 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale3 A C LEU 106 A LEU 106 1_555 A N MSE 107 A MSE 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale4 A C MSE 107 A MSE 107 1_555 A N LYS 108 A LYS 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale5 A C GLY 145 A GLY 145 1_555 A N MSE 146 A MSE 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.318 ? covale ? covale6 A C MSE 146 A MSE 146 1_555 A N ARG 147 A ARG 147 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.312 ? covale ? covale7 A C GLY 189 A GLY 189 1_555 A N MSE 190 A MSE 190 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale8 A C MSE 190 A MSE 190 1_555 A N VAL 191 A VAL 191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale9 A C ASP 218 A ASP 218 1_555 A N MSE 219 A MSE 219 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale10 A C MSE 219 A MSE 219 1_555 A N ILE 220 A ILE 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale11 A C GLY 259 A GLY 259 1_555 A N MSE 260 A MSE 260 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale12 A C MSE 260 A MSE 260 1_555 A N SER 261 A SER 261 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.304 ? covale ? covale13 A C ILE 264 A ILE 264 1_555 A N MSE 265 A MSE 265 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale14 A C MSE 265 A MSE 265 1_555 A N ASP 266 A ASP 266 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale15 B C LYS 51 B LYS 51 1_555 B N MSE 52 B MSE 52 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? covale ? covale16 B C MSE 52 B MSE 52 1_555 B N ILE 53 B ILE 53 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale17 B C LEU 106 B LEU 106 1_555 B N MSE 107 B MSE 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale18 B C MSE 107 B MSE 107 1_555 B N LYS 108 B LYS 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale19 B C GLY 145 B GLY 145 1_555 B N MSE 146 B MSE 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? covale ? covale20 B C MSE 146 B MSE 146 1_555 B N ARG 147 B ARG 147 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale21 B C GLY 189 B GLY 189 1_555 B N MSE 190 B MSE 190 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale22 B C MSE 190 B MSE 190 1_555 B N VAL 191 B VAL 191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale23 B C ASP 218 B ASP 218 1_555 B N MSE 219 B MSE 219 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale24 B C MSE 219 B MSE 219 1_555 B N ILE 220 B ILE 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale25 B C GLY 259 B GLY 259 1_555 B N MSE 260 B MSE 260 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale26 B C MSE 260 B MSE 260 1_555 B N SER 261 B SER 261 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale27 B C ILE 264 B ILE 264 1_555 B N MSE 265 B MSE 265 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale28 B C MSE 265 B MSE 265 1_555 B N ASP 266 B ASP 266 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? metalc ? metalc1 A ND1 HIS 88 A HIS 88 1_555 C K K . A K 291 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.774 ? metalc ? metalc2 A O VAL 256 A VAL 256 1_555 C K K . A K 291 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.732 ? metalc ? metalc3 C K K . A K 291 1_555 B OG1 THR 117 B THR 117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.727 ? metalc ? metalc4 C K K . A K 291 1_555 F O HOH . B HOH 296 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.679 ? metalc ? metalc5 B ND1 HIS 88 B HIS 88 1_555 D K K . B K 291 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.7 ? metalc ? metalc6 D K K . B K 291 1_555 F O HOH . B HOH 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.57 ? # _chem_comp.formula 'K 1' _chem_comp.formula_weight 39.098 _chem_comp.id K _chem_comp.mon_nstd_flag . _chem_comp.name 'POTASSIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3GVX _atom_sites.fract_transf_matrix[1][1] 0.015035 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012847 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006551 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 K A 1 291 291 K K . D 2 K B 1 291 291 K K . E 3 HOH A 1 292 292 HOH HOH . E 3 HOH A 2 293 293 HOH HOH . E 3 HOH A 3 294 294 HOH HOH . E 3 HOH A 4 295 295 HOH HOH . E 3 HOH A 5 296 296 HOH HOH . E 3 HOH A 6 297 297 HOH HOH . E 3 HOH A 7 298 298 HOH HOH . E 3 HOH A 8 299 299 HOH HOH . E 3 HOH A 9 300 300 HOH HOH . E 3 HOH A 10 301 301 HOH HOH . E 3 HOH A 11 302 302 HOH HOH . E 3 HOH A 12 303 303 HOH HOH . E 3 HOH A 13 304 304 HOH HOH . E 3 HOH A 14 305 305 HOH HOH . E 3 HOH A 15 306 306 HOH HOH . E 3 HOH A 16 307 307 HOH HOH . E 3 HOH A 17 308 308 HOH HOH . E 3 HOH A 18 309 309 HOH HOH . E 3 HOH A 19 310 310 HOH HOH . E 3 HOH A 20 311 311 HOH HOH . E 3 HOH A 21 312 312 HOH HOH . E 3 HOH A 22 313 313 HOH HOH . E 3 HOH A 23 314 314 HOH HOH . E 3 HOH A 24 315 315 HOH HOH . E 3 HOH A 25 316 316 HOH HOH . E 3 HOH A 26 317 317 HOH HOH . E 3 HOH A 27 318 318 HOH HOH . E 3 HOH A 28 319 319 HOH HOH . E 3 HOH A 29 320 320 HOH HOH . E 3 HOH A 30 321 321 HOH HOH . E 3 HOH A 31 322 322 HOH HOH . E 3 HOH A 32 323 323 HOH HOH . E 3 HOH A 33 324 324 HOH HOH . E 3 HOH A 34 325 325 HOH HOH . E 3 HOH A 35 326 326 HOH HOH . E 3 HOH A 36 327 327 HOH HOH . E 3 HOH A 37 328 328 HOH HOH . E 3 HOH A 38 329 329 HOH HOH . E 3 HOH A 39 330 330 HOH HOH . E 3 HOH A 40 331 331 HOH HOH . E 3 HOH A 41 332 332 HOH HOH . E 3 HOH A 42 333 333 HOH HOH . E 3 HOH A 43 334 334 HOH HOH . E 3 HOH A 44 335 335 HOH HOH . E 3 HOH A 45 336 336 HOH HOH . E 3 HOH A 46 337 337 HOH HOH . E 3 HOH A 47 338 338 HOH HOH . E 3 HOH A 48 339 339 HOH HOH . E 3 HOH A 49 340 340 HOH HOH . E 3 HOH A 50 341 341 HOH HOH . E 3 HOH A 51 342 342 HOH HOH . E 3 HOH A 52 343 343 HOH HOH . E 3 HOH A 53 344 344 HOH HOH . E 3 HOH A 54 345 345 HOH HOH . E 3 HOH A 55 346 346 HOH HOH . E 3 HOH A 56 347 347 HOH HOH . E 3 HOH A 57 348 348 HOH HOH . E 3 HOH A 58 349 349 HOH HOH . E 3 HOH A 59 350 350 HOH HOH . E 3 HOH A 60 351 351 HOH HOH . E 3 HOH A 61 352 352 HOH HOH . E 3 HOH A 62 353 353 HOH HOH . E 3 HOH A 63 354 354 HOH HOH . E 3 HOH A 64 355 355 HOH HOH . E 3 HOH A 65 356 356 HOH HOH . E 3 HOH A 66 357 357 HOH HOH . E 3 HOH A 67 358 358 HOH HOH . E 3 HOH A 68 359 359 HOH HOH . E 3 HOH A 69 360 360 HOH HOH . E 3 HOH A 70 361 361 HOH HOH . E 3 HOH A 71 362 362 HOH HOH . E 3 HOH A 72 363 363 HOH HOH . E 3 HOH A 73 364 364 HOH HOH . E 3 HOH A 74 365 365 HOH HOH . E 3 HOH A 75 366 366 HOH HOH . E 3 HOH A 76 367 367 HOH HOH . E 3 HOH A 77 368 368 HOH HOH . E 3 HOH A 78 369 369 HOH HOH . E 3 HOH A 79 370 370 HOH HOH . E 3 HOH A 80 371 371 HOH HOH . E 3 HOH A 81 372 372 HOH HOH . E 3 HOH A 82 373 373 HOH HOH . E 3 HOH A 83 374 374 HOH HOH . E 3 HOH A 84 375 375 HOH HOH . E 3 HOH A 85 376 376 HOH HOH . E 3 HOH A 86 377 377 HOH HOH . E 3 HOH A 87 378 378 HOH HOH . E 3 HOH A 88 379 379 HOH HOH . E 3 HOH A 89 380 380 HOH HOH . E 3 HOH A 90 381 381 HOH HOH . E 3 HOH A 91 382 382 HOH HOH . E 3 HOH A 92 383 383 HOH HOH . E 3 HOH A 93 384 384 HOH HOH . E 3 HOH A 94 385 385 HOH HOH . F 3 HOH B 1 292 292 HOH HOH . F 3 HOH B 2 293 293 HOH HOH . F 3 HOH B 3 294 294 HOH HOH . F 3 HOH B 4 295 295 HOH HOH . F 3 HOH B 5 296 296 HOH HOH . F 3 HOH B 6 297 297 HOH HOH . F 3 HOH B 7 298 298 HOH HOH . F 3 HOH B 8 299 299 HOH HOH . F 3 HOH B 9 300 300 HOH HOH . F 3 HOH B 10 301 301 HOH HOH . F 3 HOH B 11 302 302 HOH HOH . F 3 HOH B 12 303 303 HOH HOH . F 3 HOH B 13 304 304 HOH HOH . F 3 HOH B 14 305 305 HOH HOH . F 3 HOH B 15 306 306 HOH HOH . F 3 HOH B 16 307 307 HOH HOH . F 3 HOH B 17 308 308 HOH HOH . F 3 HOH B 18 309 309 HOH HOH . F 3 HOH B 19 310 310 HOH HOH . F 3 HOH B 20 311 311 HOH HOH . F 3 HOH B 21 312 312 HOH HOH . F 3 HOH B 22 313 313 HOH HOH . F 3 HOH B 23 314 314 HOH HOH . F 3 HOH B 24 315 315 HOH HOH . F 3 HOH B 25 316 316 HOH HOH . F 3 HOH B 26 317 317 HOH HOH . F 3 HOH B 27 318 318 HOH HOH . F 3 HOH B 28 319 319 HOH HOH . F 3 HOH B 29 320 320 HOH HOH . F 3 HOH B 30 321 321 HOH HOH . F 3 HOH B 31 322 322 HOH HOH . F 3 HOH B 32 323 323 HOH HOH . F 3 HOH B 33 324 324 HOH HOH . F 3 HOH B 34 325 325 HOH HOH . F 3 HOH B 35 326 326 HOH HOH . F 3 HOH B 36 327 327 HOH HOH . F 3 HOH B 37 328 328 HOH HOH . F 3 HOH B 38 329 329 HOH HOH . F 3 HOH B 39 330 330 HOH HOH . F 3 HOH B 40 331 331 HOH HOH . F 3 HOH B 41 332 332 HOH HOH . F 3 HOH B 42 333 333 HOH HOH . F 3 HOH B 43 334 334 HOH HOH . F 3 HOH B 44 335 335 HOH HOH . F 3 HOH B 45 336 336 HOH HOH . F 3 HOH B 46 337 337 HOH HOH . F 3 HOH B 47 338 338 HOH HOH . F 3 HOH B 48 339 339 HOH HOH . F 3 HOH B 49 340 340 HOH HOH . F 3 HOH B 50 341 341 HOH HOH . F 3 HOH B 51 342 342 HOH HOH . F 3 HOH B 52 343 343 HOH HOH . F 3 HOH B 53 344 344 HOH HOH . F 3 HOH B 54 345 345 HOH HOH . F 3 HOH B 55 346 346 HOH HOH . F 3 HOH B 56 347 347 HOH HOH . F 3 HOH B 57 348 348 HOH HOH . F 3 HOH B 58 349 349 HOH HOH . F 3 HOH B 59 350 350 HOH HOH . F 3 HOH B 60 351 351 HOH HOH . F 3 HOH B 61 352 352 HOH HOH . F 3 HOH B 62 353 353 HOH HOH . F 3 HOH B 63 354 354 HOH HOH . F 3 HOH B 64 355 355 HOH HOH . F 3 HOH B 65 356 356 HOH HOH . F 3 HOH B 66 357 357 HOH HOH . F 3 HOH B 67 358 358 HOH HOH . F 3 HOH B 68 359 359 HOH HOH . F 3 HOH B 69 360 360 HOH HOH . F 3 HOH B 70 361 361 HOH HOH . F 3 HOH B 71 362 362 HOH HOH . F 3 HOH B 72 363 363 HOH HOH . F 3 HOH B 73 364 364 HOH HOH . F 3 HOH B 74 365 365 HOH HOH . F 3 HOH B 75 366 366 HOH HOH . F 3 HOH B 76 367 367 HOH HOH . F 3 HOH B 77 368 368 HOH HOH . F 3 HOH B 78 369 369 HOH HOH . F 3 HOH B 79 370 370 HOH HOH . F 3 HOH B 80 371 371 HOH HOH . F 3 HOH B 81 372 372 HOH HOH . F 3 HOH B 82 373 373 HOH HOH . F 3 HOH B 83 374 374 HOH HOH . F 3 HOH B 84 375 375 HOH HOH . F 3 HOH B 85 376 376 HOH HOH . F 3 HOH B 86 377 377 HOH HOH . F 3 HOH B 87 378 378 HOH HOH . F 3 HOH B 88 379 379 HOH HOH . F 3 HOH B 89 380 380 HOH HOH . F 3 HOH B 90 381 381 HOH HOH . F 3 HOH B 91 382 382 HOH HOH . F 3 HOH B 92 383 383 HOH HOH . F 3 HOH B 93 384 384 HOH HOH . F 3 HOH B 94 385 385 HOH HOH . F 3 HOH B 95 386 386 HOH HOH . F 3 HOH B 96 387 387 HOH HOH . F 3 HOH B 97 388 388 HOH HOH . F 3 HOH B 98 389 389 HOH HOH . F 3 HOH B 99 390 390 HOH HOH . F 3 HOH B 100 391 391 HOH HOH . F 3 HOH B 101 392 392 HOH HOH . F 3 HOH B 102 393 393 HOH HOH . F 3 HOH B 103 394 394 HOH HOH . F 3 HOH B 104 395 395 HOH HOH . F 3 HOH B 105 396 396 HOH HOH . F 3 HOH B 106 397 397 HOH HOH . F 3 HOH B 107 398 398 HOH HOH . F 3 HOH B 108 399 399 HOH HOH . F 3 HOH B 109 400 400 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol K _atom_site.label_atom_id K _atom_site.label_comp_id K _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x 41.705 _atom_site.Cartn_y 10.006 _atom_site.Cartn_z 22.02 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 44.78 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id K _atom_site.auth_comp_id K _atom_site.auth_seq_id 291 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 39 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 239 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #