data_3GWR # _model_server_result.job_id GY1Y3AfCPoOKyqjtBzDyZQ _model_server_result.datetime_utc '2025-02-05 14:01:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3gwr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":146}' # _entry.id 3GWR # _exptl.entry_id 3GWR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 194.226 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TETRAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3GWR _cell.length_a 41.445 _cell.length_b 89.655 _cell.length_c 90.259 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3GWR _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 H N N ? 3 I N N ? 3 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ASP 28 A ASP 27 1_555 A N MSE 29 A MSE 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale2 A C MSE 29 A MSE 28 1_555 A N MSE 30 A MSE 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale3 A C MSE 30 A MSE 29 1_555 A N ALA 31 A ALA 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale4 A C SER 61 A SER 60 1_555 A N MSE 62 A MSE 61 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale5 A C MSE 62 A MSE 61 1_555 A N PHE 63 A PHE 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale6 A C ARG 119 A ARG 118 1_555 A N MSE 120 A MSE 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale7 A C MSE 120 A MSE 119 1_555 A N VAL 121 A VAL 120 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale8 B C MSE 2 B MSE 1 1_555 B N SER 3 B SER 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.344 ? covale ? covale9 B C ASP 28 B ASP 27 1_555 B N MSE 29 B MSE 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale10 B C MSE 29 B MSE 28 1_555 B N MSE 30 B MSE 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale11 B C MSE 30 B MSE 29 1_555 B N ALA 31 B ALA 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale12 B C SER 61 B SER 60 1_555 B N MSE 62 B MSE 61 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale13 B C MSE 62 B MSE 61 1_555 B N PHE 63 B PHE 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.316 ? covale ? covale14 B C ARG 119 B ARG 118 1_555 B N MSE 120 B MSE 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale15 B C MSE 120 B MSE 119 1_555 B N VAL 121 B VAL 120 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? # _chem_comp.formula 'C8 H18 O5' _chem_comp.formula_weight 194.226 _chem_comp.id PG4 _chem_comp.mon_nstd_flag . _chem_comp.name 'TETRAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 PG4 sing 237 n n O1 HO1 PG4 sing 238 n n C1 C2 PG4 sing 239 n n C1 H11 PG4 sing 240 n n C1 H12 PG4 sing 241 n n C2 O2 PG4 sing 242 n n C2 H21 PG4 sing 243 n n C2 H22 PG4 sing 244 n n O2 C3 PG4 sing 245 n n C3 C4 PG4 sing 246 n n C3 H31 PG4 sing 247 n n C3 H32 PG4 sing 248 n n C4 O3 PG4 sing 249 n n C4 H41 PG4 sing 250 n n C4 H42 PG4 sing 251 n n O3 C5 PG4 sing 252 n n C5 C6 PG4 sing 253 n n C5 H51 PG4 sing 254 n n C5 H52 PG4 sing 255 n n C6 O4 PG4 sing 256 n n C6 H61 PG4 sing 257 n n C6 H62 PG4 sing 258 n n O4 C7 PG4 sing 259 n n C7 C8 PG4 sing 260 n n C7 H71 PG4 sing 261 n n C7 H72 PG4 sing 262 n n C8 O5 PG4 sing 263 n n C8 H81 PG4 sing 264 n n C8 H82 PG4 sing 265 n n O5 HO5 PG4 sing 266 n n # _atom_sites.entry_id 3GWR _atom_sites.fract_transf_matrix[1][1] 0.024128 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011154 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011079 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 UNL A 1 200 200 UNL UNL . D 3 PG4 A 1 144 1 PG4 PG4 . E 3 PG4 A 1 145 2 PG4 PG4 . F 3 PG4 A 1 146 6 PG4 PG4 . G 2 UNL B 1 200 200 UNL UNL . H 3 PG4 B 1 144 3 PG4 PG4 . I 3 PG4 B 1 145 4 PG4 PG4 . J 3 PG4 B 1 146 5 PG4 PG4 . K 4 HOH A 1 151 11 HOH HOH . K 4 HOH A 2 154 14 HOH HOH . K 4 HOH A 3 157 17 HOH HOH . K 4 HOH A 4 161 21 HOH HOH . K 4 HOH A 5 163 23 HOH HOH . K 4 HOH A 6 165 25 HOH HOH . K 4 HOH A 7 166 26 HOH HOH . K 4 HOH A 8 167 27 HOH HOH . K 4 HOH A 9 169 29 HOH HOH . K 4 HOH A 10 171 31 HOH HOH . K 4 HOH A 11 172 32 HOH HOH . K 4 HOH A 12 174 34 HOH HOH . K 4 HOH A 13 176 36 HOH HOH . K 4 HOH A 14 177 37 HOH HOH . K 4 HOH A 15 180 40 HOH HOH . K 4 HOH A 16 183 43 HOH HOH . K 4 HOH A 17 189 49 HOH HOH . K 4 HOH A 18 194 54 HOH HOH . K 4 HOH A 19 195 55 HOH HOH . K 4 HOH A 20 196 56 HOH HOH . K 4 HOH A 21 201 60 HOH HOH . K 4 HOH A 22 203 62 HOH HOH . K 4 HOH A 23 204 63 HOH HOH . K 4 HOH A 24 210 69 HOH HOH . K 4 HOH A 25 211 70 HOH HOH . K 4 HOH A 26 213 72 HOH HOH . K 4 HOH A 27 215 74 HOH HOH . K 4 HOH A 28 216 75 HOH HOH . K 4 HOH A 29 218 77 HOH HOH . K 4 HOH A 30 220 79 HOH HOH . K 4 HOH A 31 221 80 HOH HOH . K 4 HOH A 32 225 84 HOH HOH . K 4 HOH A 33 226 85 HOH HOH . K 4 HOH A 34 229 88 HOH HOH . K 4 HOH A 35 230 89 HOH HOH . K 4 HOH A 36 234 93 HOH HOH . K 4 HOH A 37 238 97 HOH HOH . K 4 HOH A 38 239 98 HOH HOH . K 4 HOH A 39 240 99 HOH HOH . K 4 HOH A 40 245 104 HOH HOH . K 4 HOH A 41 246 105 HOH HOH . K 4 HOH A 42 250 109 HOH HOH . K 4 HOH A 43 251 110 HOH HOH . K 4 HOH A 44 252 111 HOH HOH . L 4 HOH B 1 147 7 HOH HOH . L 4 HOH B 2 148 8 HOH HOH . L 4 HOH B 3 149 9 HOH HOH . L 4 HOH B 4 150 10 HOH HOH . L 4 HOH B 5 152 12 HOH HOH . L 4 HOH B 6 153 13 HOH HOH . L 4 HOH B 7 155 15 HOH HOH . L 4 HOH B 8 156 16 HOH HOH . L 4 HOH B 9 158 18 HOH HOH . L 4 HOH B 10 159 19 HOH HOH . L 4 HOH B 11 160 20 HOH HOH . L 4 HOH B 12 162 22 HOH HOH . L 4 HOH B 13 164 24 HOH HOH . L 4 HOH B 14 168 28 HOH HOH . L 4 HOH B 15 170 30 HOH HOH . L 4 HOH B 16 173 33 HOH HOH . L 4 HOH B 17 175 35 HOH HOH . L 4 HOH B 18 178 38 HOH HOH . L 4 HOH B 19 179 39 HOH HOH . L 4 HOH B 20 181 41 HOH HOH . L 4 HOH B 21 182 42 HOH HOH . L 4 HOH B 22 184 44 HOH HOH . L 4 HOH B 23 185 45 HOH HOH . L 4 HOH B 24 186 46 HOH HOH . L 4 HOH B 25 187 47 HOH HOH . L 4 HOH B 26 188 48 HOH HOH . L 4 HOH B 27 190 50 HOH HOH . L 4 HOH B 28 191 51 HOH HOH . L 4 HOH B 29 192 52 HOH HOH . L 4 HOH B 30 193 53 HOH HOH . L 4 HOH B 31 197 57 HOH HOH . L 4 HOH B 32 198 58 HOH HOH . L 4 HOH B 33 199 59 HOH HOH . L 4 HOH B 34 202 61 HOH HOH . L 4 HOH B 35 205 64 HOH HOH . L 4 HOH B 36 206 65 HOH HOH . L 4 HOH B 37 207 66 HOH HOH . L 4 HOH B 38 208 67 HOH HOH . L 4 HOH B 39 209 68 HOH HOH . L 4 HOH B 40 212 71 HOH HOH . L 4 HOH B 41 214 73 HOH HOH . L 4 HOH B 42 217 76 HOH HOH . L 4 HOH B 43 219 78 HOH HOH . L 4 HOH B 44 222 81 HOH HOH . L 4 HOH B 45 223 82 HOH HOH . L 4 HOH B 46 224 83 HOH HOH . L 4 HOH B 47 227 86 HOH HOH . L 4 HOH B 48 228 87 HOH HOH . L 4 HOH B 49 231 90 HOH HOH . L 4 HOH B 50 232 91 HOH HOH . L 4 HOH B 51 233 92 HOH HOH . L 4 HOH B 52 235 94 HOH HOH . L 4 HOH B 53 236 95 HOH HOH . L 4 HOH B 54 237 96 HOH HOH . L 4 HOH B 55 241 100 HOH HOH . L 4 HOH B 56 242 101 HOH HOH . L 4 HOH B 57 243 102 HOH HOH . L 4 HOH B 58 244 103 HOH HOH . L 4 HOH B 59 247 106 HOH HOH . L 4 HOH B 60 248 107 HOH HOH . L 4 HOH B 61 249 108 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PG4 . . . J 3 -12.591 7.635 16.039 1 61.2 ? O1 PG4 146 B 1 HETATM 2 C C1 PG4 . . . J 3 -13.297 8.89 16.131 1 65.93 ? C1 PG4 146 B 1 HETATM 3 C C2 PG4 . . . J 3 -12.869 9.891 15.038 1 65.33 ? C2 PG4 146 B 1 HETATM 4 O O2 PG4 . . . J 3 -12.174 11.051 15.532 1 66.3 ? O2 PG4 146 B 1 HETATM 5 C C3 PG4 . . . J 3 -12.961 12.061 16.183 1 66.02 ? C3 PG4 146 B 1 HETATM 6 C C4 PG4 . . . J 3 -12.06 13.161 16.781 1 66.36 ? C4 PG4 146 B 1 HETATM 7 O O3 PG4 . . . J 3 -12.433 14.527 16.544 1 59.32 ? O3 PG4 146 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 316 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 7 #