data_3GZ1 # _model_server_result.job_id WHTWNJYxz5-GJd0CNcggYw _model_server_result.datetime_utc '2024-11-12 20:42:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3gz1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":152}' # _entry.id 3GZ1 # _exptl.entry_id 3GZ1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3GZ1 _cell.length_a 73.31 _cell.length_b 97.09 _cell.length_c 106.53 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3GZ1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 G N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 3GZ1 _atom_sites.fract_transf_matrix[1][1] 0.013641 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.0103 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009387 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 GOL A 1 152 2 GOL GOL . F 3 GOL A 1 153 3 GOL GOL . G 3 GOL B 1 152 1 GOL GOL . H 4 HOH A 1 154 1 HOH HOH . H 4 HOH A 2 155 4 HOH HOH . H 4 HOH A 3 156 5 HOH HOH . H 4 HOH A 4 157 6 HOH HOH . H 4 HOH A 5 158 7 HOH HOH . H 4 HOH A 6 159 8 HOH HOH . H 4 HOH A 7 160 9 HOH HOH . H 4 HOH A 8 161 10 HOH HOH . H 4 HOH A 9 162 12 HOH HOH . H 4 HOH A 10 163 14 HOH HOH . H 4 HOH A 11 164 17 HOH HOH . H 4 HOH A 12 165 18 HOH HOH . H 4 HOH A 13 166 20 HOH HOH . H 4 HOH A 14 167 21 HOH HOH . H 4 HOH A 15 168 22 HOH HOH . H 4 HOH A 16 169 23 HOH HOH . H 4 HOH A 17 170 24 HOH HOH . H 4 HOH A 18 171 35 HOH HOH . H 4 HOH A 19 172 36 HOH HOH . H 4 HOH A 20 173 39 HOH HOH . H 4 HOH A 21 174 42 HOH HOH . H 4 HOH A 22 175 43 HOH HOH . H 4 HOH A 23 176 44 HOH HOH . H 4 HOH A 24 177 46 HOH HOH . H 4 HOH A 25 178 47 HOH HOH . H 4 HOH A 26 179 48 HOH HOH . H 4 HOH A 27 180 49 HOH HOH . H 4 HOH A 28 181 50 HOH HOH . H 4 HOH A 29 182 51 HOH HOH . H 4 HOH A 30 183 52 HOH HOH . H 4 HOH A 31 184 55 HOH HOH . H 4 HOH A 32 185 57 HOH HOH . H 4 HOH A 33 186 60 HOH HOH . H 4 HOH A 34 187 63 HOH HOH . H 4 HOH A 35 188 64 HOH HOH . I 4 HOH B 1 153 2 HOH HOH . I 4 HOH B 2 154 3 HOH HOH . I 4 HOH B 3 155 11 HOH HOH . I 4 HOH B 4 156 13 HOH HOH . I 4 HOH B 5 157 15 HOH HOH . I 4 HOH B 6 158 16 HOH HOH . I 4 HOH B 7 159 19 HOH HOH . I 4 HOH B 8 160 25 HOH HOH . I 4 HOH B 9 161 26 HOH HOH . I 4 HOH B 10 162 27 HOH HOH . I 4 HOH B 11 163 28 HOH HOH . I 4 HOH B 12 164 29 HOH HOH . I 4 HOH B 13 165 30 HOH HOH . I 4 HOH B 14 166 31 HOH HOH . I 4 HOH B 15 167 32 HOH HOH . I 4 HOH B 16 168 33 HOH HOH . I 4 HOH B 17 169 34 HOH HOH . I 4 HOH B 18 170 37 HOH HOH . I 4 HOH B 19 171 38 HOH HOH . I 4 HOH B 20 172 40 HOH HOH . I 4 HOH B 21 173 41 HOH HOH . I 4 HOH B 22 174 53 HOH HOH . I 4 HOH B 23 175 56 HOH HOH . I 4 HOH B 24 176 58 HOH HOH . I 4 HOH B 25 177 59 HOH HOH . I 4 HOH B 26 178 61 HOH HOH . I 4 HOH B 27 179 62 HOH HOH . J 4 HOH P 1 45 45 HOH HOH . J 4 HOH P 2 73 54 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . G 3 -17.807 14.621 -3.604 1 83.79 ? C1 GOL 152 B 1 HETATM 2 O O1 GOL . . . G 3 -16.411 14.645 -3.35 1 85.67 ? O1 GOL 152 B 1 HETATM 3 C C2 GOL . . . G 3 -18.171 13.148 -3.675 1 83.14 ? C2 GOL 152 B 1 HETATM 4 O O2 GOL . . . G 3 -18.065 12.579 -2.405 1 83.5 ? O2 GOL 152 B 1 HETATM 5 C C3 GOL . . . G 3 -19.547 12.873 -4.235 1 82.65 ? C3 GOL 152 B 1 HETATM 6 O O3 GOL . . . G 3 -19.512 13.301 -5.571 1 83.74 ? O3 GOL 152 B 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 6 #