data_3GZ2 # _model_server_result.job_id 8N_FegKbQTGY1BZEwHvsOg _model_server_result.datetime_utc '2025-03-06 09:18:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3gz2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":154}' # _entry.id 3GZ2 # _exptl.entry_id 3GZ2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 69.085 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description IMIDAZOLE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3GZ2 _cell.length_a 113.72 _cell.length_b 113.72 _cell.length_c 76.37 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3GZ2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,D,E,F,G,H 1 1 C 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H5 N2 1' _chem_comp.formula_weight 69.085 _chem_comp.id IMD _chem_comp.mon_nstd_flag . _chem_comp.name IMIDAZOLE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 IMD sing 186 n y N1 C5 IMD sing 187 n y N1 HN1 IMD sing 188 n n C2 N3 IMD doub 189 n y C2 H2 IMD sing 190 n n N3 C4 IMD sing 191 n y N3 HN3 IMD sing 192 n n C4 C5 IMD doub 193 n y C4 H4 IMD sing 194 n n C5 H5 IMD sing 195 n n # _atom_sites.entry_id 3GZ2 _atom_sites.fract_transf_matrix[1][1] 0.008794 _atom_sites.fract_transf_matrix[1][2] 0.005077 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010154 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013094 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 GOL A 1 152 1 GOL GOL . E 3 GOL A 1 153 2 GOL GOL . F 4 IMD A 1 154 3 IMD IMD . G 5 HOH A 1 155 2 HOH HOH . G 5 HOH A 2 156 3 HOH HOH . G 5 HOH A 3 157 9 HOH HOH . G 5 HOH A 4 158 10 HOH HOH . G 5 HOH A 5 159 11 HOH HOH . H 5 HOH B 1 152 1 HOH HOH . H 5 HOH B 2 153 4 HOH HOH . H 5 HOH B 3 154 5 HOH HOH . H 5 HOH B 4 155 6 HOH HOH . H 5 HOH B 5 156 7 HOH HOH . H 5 HOH B 6 157 8 HOH HOH . H 5 HOH B 7 158 12 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 IMD . . . F 4 45.38 -50.315 13.356 1 96.19 ? N1 IMD 154 A 1 HETATM 2 C C2 IMD . . . F 4 45.834 -50.625 12.108 1 94.5 ? C2 IMD 154 A 1 HETATM 3 N N3 IMD . . . F 4 45.498 -49.582 11.298 1 94.51 ? N3 IMD 154 A 1 HETATM 4 C C4 IMD . . . F 4 44.85 -48.618 12.017 1 94.1 ? C4 IMD 154 A 1 HETATM 5 C C5 IMD . . . F 4 44.769 -49.086 13.336 1 95.15 ? C5 IMD 154 A 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 5 #