data_3H0B # _model_server_result.job_id Iy6RO2e2fuJmEjkIOvN9VA _model_server_result.datetime_utc '2025-07-02 07:11:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3h0b # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":449}' # _entry.id 3H0B # _exptl.entry_id 3H0B _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 386.377 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-[(1S)-1-(3-fluoro-4-methoxyphenyl)-2-(2-methoxy-5-nitrophenyl)ethyl]-1H-imidazol-2-amine _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 99.47 _cell.angle_gamma 90 _cell.entry_id 3H0B _cell.length_a 221.178 _cell.length_b 107.44 _cell.length_c 65.084 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3H0B _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,G 1 1 B,E,H 2 1 C,F,I 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 E N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 175 A CYS 155 1_555 A SG CYS 379 A CYS 359 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf2 A SG CYS 237 A CYS 217 1_555 A SG CYS 402 A CYS 382 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf3 A SG CYS 289 A CYS 269 1_555 A SG CYS 339 A CYS 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf4 B SG CYS 175 B CYS 155 1_555 B SG CYS 379 B CYS 359 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf5 B SG CYS 237 B CYS 217 1_555 B SG CYS 402 B CYS 382 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf6 B SG CYS 289 B CYS 269 1_555 B SG CYS 339 B CYS 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf7 C SG CYS 175 C CYS 155 1_555 C SG CYS 379 C CYS 359 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf8 C SG CYS 237 C CYS 217 1_555 C SG CYS 402 C CYS 382 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf9 C SG CYS 289 C CYS 269 1_555 C SG CYS 339 C CYS 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? # _chem_comp.formula 'C19 H19 F N4 O4' _chem_comp.formula_weight 386.377 _chem_comp.id B35 _chem_comp.mon_nstd_flag . _chem_comp.name 4-[(1S)-1-(3-fluoro-4-methoxyphenyl)-2-(2-methoxy-5-nitrophenyl)ethyl]-1H-imidazol-2-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 B35 doub 70 n y C1 C B35 sing 71 n y C1 O B35 sing 72 n n C2 C3 B35 sing 73 n y C2 H2 B35 sing 74 n n C3 C4 B35 doub 75 n y C3 H3 B35 sing 76 n n C4 C5 B35 sing 77 n y C4 C7 B35 sing 78 n n N C8 B35 sing 79 n y N C18 B35 doub 80 n y C5 C B35 doub 81 n y C5 H5 B35 sing 82 n n C6 O B35 sing 83 n n C6 H6 B35 sing 84 n n C6 H6A B35 sing 85 n n C6 H6B B35 sing 86 n n C7 C8 B35 sing 87 n n C7 C9 B35 sing 88 n n C7 H7 B35 sing 89 n n C8 C20 B35 doub 90 n y C F B35 sing 91 n n C9 C10 B35 sing 92 n n C9 H9 B35 sing 93 n n C9 H9A B35 sing 94 n n C10 C11 B35 doub 95 n y C10 C15 B35 sing 96 n y C11 C12 B35 sing 97 n y C11 H11 B35 sing 98 n n C12 C13 B35 doub 99 n y C12 N22 B35 sing 100 n n C13 C14 B35 sing 101 n y C13 H13 B35 sing 102 n n C14 C15 B35 doub 103 n y C14 H14 B35 sing 104 n n C15 O16 B35 sing 105 n n O16 C17 B35 sing 106 n n C17 H17 B35 sing 107 n n C17 H17A B35 sing 108 n n C17 H17B B35 sing 109 n n C18 N19 B35 sing 110 n y C18 N21 B35 sing 111 n n N19 C20 B35 sing 112 n y N19 HN19 B35 sing 113 n n C20 H20 B35 sing 114 n n N21 HN21 B35 sing 115 n n N21 HN2A B35 sing 116 n n N22 O23 B35 sing 117 n n N22 O24 B35 doub 118 n n # _atom_sites.entry_id 3H0B _atom_sites.fract_transf_matrix[1][1] 0.004521 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000754 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009308 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015577 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 B35 A 1 449 1 B35 B35 . E 2 B35 B 1 449 2 B35 B35 . F 2 B35 C 1 449 3 B35 B35 . G 3 HOH A 1 450 4 HOH HOH . G 3 HOH A 2 451 5 HOH HOH . G 3 HOH A 3 452 16 HOH HOH . G 3 HOH A 4 453 17 HOH HOH . G 3 HOH A 5 454 20 HOH HOH . G 3 HOH A 6 455 26 HOH HOH . G 3 HOH A 7 456 29 HOH HOH . G 3 HOH A 8 457 30 HOH HOH . G 3 HOH A 9 458 34 HOH HOH . G 3 HOH A 10 459 35 HOH HOH . G 3 HOH A 11 460 40 HOH HOH . G 3 HOH A 12 461 43 HOH HOH . G 3 HOH A 13 462 44 HOH HOH . G 3 HOH A 14 463 45 HOH HOH . G 3 HOH A 15 464 46 HOH HOH . G 3 HOH A 16 465 47 HOH HOH . G 3 HOH A 17 466 54 HOH HOH . G 3 HOH A 18 467 55 HOH HOH . G 3 HOH A 19 468 56 HOH HOH . G 3 HOH A 20 469 60 HOH HOH . G 3 HOH A 21 470 61 HOH HOH . G 3 HOH A 22 471 65 HOH HOH . G 3 HOH A 23 472 67 HOH HOH . G 3 HOH A 24 473 68 HOH HOH . G 3 HOH A 25 474 69 HOH HOH . G 3 HOH A 26 475 70 HOH HOH . G 3 HOH A 27 476 73 HOH HOH . G 3 HOH A 28 477 75 HOH HOH . G 3 HOH A 29 478 78 HOH HOH . G 3 HOH A 30 479 83 HOH HOH . G 3 HOH A 31 480 86 HOH HOH . G 3 HOH A 32 481 87 HOH HOH . G 3 HOH A 33 482 89 HOH HOH . G 3 HOH A 34 483 93 HOH HOH . G 3 HOH A 35 484 96 HOH HOH . G 3 HOH A 36 485 97 HOH HOH . G 3 HOH A 37 486 109 HOH HOH . G 3 HOH A 38 487 111 HOH HOH . G 3 HOH A 39 488 112 HOH HOH . G 3 HOH A 40 489 121 HOH HOH . G 3 HOH A 41 490 127 HOH HOH . G 3 HOH A 42 491 128 HOH HOH . G 3 HOH A 43 492 130 HOH HOH . G 3 HOH A 44 493 131 HOH HOH . G 3 HOH A 45 494 132 HOH HOH . G 3 HOH A 46 495 137 HOH HOH . G 3 HOH A 47 496 141 HOH HOH . G 3 HOH A 48 497 143 HOH HOH . G 3 HOH A 49 498 146 HOH HOH . G 3 HOH A 50 499 147 HOH HOH . G 3 HOH A 51 500 149 HOH HOH . G 3 HOH A 52 501 150 HOH HOH . G 3 HOH A 53 502 151 HOH HOH . G 3 HOH A 54 503 154 HOH HOH . G 3 HOH A 55 504 155 HOH HOH . G 3 HOH A 56 505 158 HOH HOH . G 3 HOH A 57 506 160 HOH HOH . G 3 HOH A 58 507 165 HOH HOH . G 3 HOH A 59 508 167 HOH HOH . G 3 HOH A 60 509 172 HOH HOH . H 3 HOH B 1 450 1 HOH HOH . H 3 HOH B 2 451 2 HOH HOH . H 3 HOH B 3 452 3 HOH HOH . H 3 HOH B 4 453 9 HOH HOH . H 3 HOH B 5 454 11 HOH HOH . H 3 HOH B 6 455 12 HOH HOH . H 3 HOH B 7 456 13 HOH HOH . H 3 HOH B 8 457 14 HOH HOH . H 3 HOH B 9 458 15 HOH HOH . H 3 HOH B 10 459 18 HOH HOH . H 3 HOH B 11 460 22 HOH HOH . H 3 HOH B 12 461 23 HOH HOH . H 3 HOH B 13 462 28 HOH HOH . H 3 HOH B 14 463 31 HOH HOH . H 3 HOH B 15 464 32 HOH HOH . H 3 HOH B 16 465 33 HOH HOH . H 3 HOH B 17 466 36 HOH HOH . H 3 HOH B 18 467 38 HOH HOH . H 3 HOH B 19 468 41 HOH HOH . H 3 HOH B 20 469 42 HOH HOH . H 3 HOH B 21 470 48 HOH HOH . H 3 HOH B 22 471 50 HOH HOH . H 3 HOH B 23 472 51 HOH HOH . H 3 HOH B 24 473 52 HOH HOH . H 3 HOH B 25 474 57 HOH HOH . H 3 HOH B 26 475 58 HOH HOH . H 3 HOH B 27 476 59 HOH HOH . H 3 HOH B 28 477 62 HOH HOH . H 3 HOH B 29 478 63 HOH HOH . H 3 HOH B 30 479 64 HOH HOH . H 3 HOH B 31 480 71 HOH HOH . H 3 HOH B 32 481 72 HOH HOH . H 3 HOH B 33 482 74 HOH HOH . H 3 HOH B 34 483 76 HOH HOH . H 3 HOH B 35 484 79 HOH HOH . H 3 HOH B 36 485 80 HOH HOH . H 3 HOH B 37 486 81 HOH HOH . H 3 HOH B 38 487 85 HOH HOH . H 3 HOH B 39 488 88 HOH HOH . H 3 HOH B 40 489 92 HOH HOH . H 3 HOH B 41 490 94 HOH HOH . H 3 HOH B 42 491 99 HOH HOH . H 3 HOH B 43 492 103 HOH HOH . H 3 HOH B 44 493 104 HOH HOH . H 3 HOH B 45 494 105 HOH HOH . H 3 HOH B 46 495 107 HOH HOH . H 3 HOH B 47 496 110 HOH HOH . H 3 HOH B 48 497 113 HOH HOH . H 3 HOH B 49 498 115 HOH HOH . H 3 HOH B 50 499 116 HOH HOH . H 3 HOH B 51 500 117 HOH HOH . H 3 HOH B 52 501 118 HOH HOH . H 3 HOH B 53 502 120 HOH HOH . H 3 HOH B 54 503 123 HOH HOH . H 3 HOH B 55 504 124 HOH HOH . H 3 HOH B 56 505 125 HOH HOH . H 3 HOH B 57 506 126 HOH HOH . H 3 HOH B 58 507 129 HOH HOH . H 3 HOH B 59 508 135 HOH HOH . H 3 HOH B 60 509 136 HOH HOH . H 3 HOH B 61 510 138 HOH HOH . H 3 HOH B 62 511 139 HOH HOH . H 3 HOH B 63 512 142 HOH HOH . H 3 HOH B 64 513 144 HOH HOH . H 3 HOH B 65 514 148 HOH HOH . H 3 HOH B 66 515 152 HOH HOH . H 3 HOH B 67 516 153 HOH HOH . H 3 HOH B 68 517 156 HOH HOH . H 3 HOH B 69 518 157 HOH HOH . H 3 HOH B 70 519 159 HOH HOH . H 3 HOH B 71 520 162 HOH HOH . H 3 HOH B 72 521 163 HOH HOH . H 3 HOH B 73 522 166 HOH HOH . H 3 HOH B 74 523 169 HOH HOH . H 3 HOH B 75 524 170 HOH HOH . H 3 HOH B 76 525 171 HOH HOH . H 3 HOH B 77 526 101 HOH HOH . I 3 HOH C 1 450 6 HOH HOH . I 3 HOH C 2 451 7 HOH HOH . I 3 HOH C 3 452 8 HOH HOH . I 3 HOH C 4 453 10 HOH HOH . I 3 HOH C 5 454 19 HOH HOH . I 3 HOH C 6 455 21 HOH HOH . I 3 HOH C 7 456 24 HOH HOH . I 3 HOH C 8 457 25 HOH HOH . I 3 HOH C 9 458 27 HOH HOH . I 3 HOH C 10 459 37 HOH HOH . I 3 HOH C 11 460 39 HOH HOH . I 3 HOH C 12 461 49 HOH HOH . I 3 HOH C 13 462 53 HOH HOH . I 3 HOH C 14 463 66 HOH HOH . I 3 HOH C 15 464 77 HOH HOH . I 3 HOH C 16 465 82 HOH HOH . I 3 HOH C 17 466 84 HOH HOH . I 3 HOH C 18 467 90 HOH HOH . I 3 HOH C 19 468 91 HOH HOH . I 3 HOH C 20 469 95 HOH HOH . I 3 HOH C 21 470 98 HOH HOH . I 3 HOH C 22 471 100 HOH HOH . I 3 HOH C 23 473 102 HOH HOH . I 3 HOH C 24 474 106 HOH HOH . I 3 HOH C 25 475 108 HOH HOH . I 3 HOH C 26 476 114 HOH HOH . I 3 HOH C 27 477 119 HOH HOH . I 3 HOH C 28 478 122 HOH HOH . I 3 HOH C 29 479 133 HOH HOH . I 3 HOH C 30 480 134 HOH HOH . I 3 HOH C 31 481 140 HOH HOH . I 3 HOH C 32 482 145 HOH HOH . I 3 HOH C 33 483 161 HOH HOH . I 3 HOH C 34 484 164 HOH HOH . I 3 HOH C 35 485 168 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 B35 . . . E 2 35.896 47.487 11.73 1 42.4 ? C1 B35 449 B 1 HETATM 2 C C2 B35 . . . E 2 34.852 46.572 11.686 1 42.15 ? C2 B35 449 B 1 HETATM 3 C C3 B35 . . . E 2 33.585 46.942 12.11 1 42.01 ? C3 B35 449 B 1 HETATM 4 C C4 B35 . . . E 2 33.333 48.218 12.59 1 42.25 ? C4 B35 449 B 1 HETATM 5 N N B35 . . . E 2 30.688 47.628 11.108 1 41.96 ? N B35 449 B 1 HETATM 6 C C5 B35 . . . E 2 34.371 49.137 12.635 1 42.1 ? C5 B35 449 B 1 HETATM 7 C C6 B35 . . . E 2 37.423 46.032 10.629 1 42.71 ? C6 B35 449 B 1 HETATM 8 C C7 B35 . . . E 2 31.944 48.581 13.034 1 42.34 ? C7 B35 449 B 1 HETATM 9 C C8 B35 . . . E 2 31.061 48.713 11.821 1 42.1 ? C8 B35 449 B 1 HETATM 10 C C B35 . . . E 2 35.633 48.764 12.209 1 42.3 ? C B35 449 B 1 HETATM 11 O O B35 . . . E 2 37.155 47.263 11.352 1 42.51 ? O B35 449 B 1 HETATM 12 F F B35 . . . E 2 36.614 49.67 12.267 1 42.47 ? F B35 449 B 1 HETATM 13 C C9 B35 . . . E 2 31.342 47.62 14.055 1 43.01 ? C9 B35 449 B 1 HETATM 14 C C10 B35 . . . E 2 30.2 48.29 14.771 1 44.01 ? C10 B35 449 B 1 HETATM 15 C C11 B35 . . . E 2 28.895 47.92 14.464 1 44.54 ? C11 B35 449 B 1 HETATM 16 C C12 B35 . . . E 2 27.828 48.532 15.116 1 45.18 ? C12 B35 449 B 1 HETATM 17 C C13 B35 . . . E 2 28.062 49.52 16.071 1 45.01 ? C13 B35 449 B 1 HETATM 18 C C14 B35 . . . E 2 29.373 49.888 16.368 1 44.86 ? C14 B35 449 B 1 HETATM 19 C C15 B35 . . . E 2 30.444 49.276 15.719 1 44.76 ? C15 B35 449 B 1 HETATM 20 O O16 B35 . . . E 2 31.733 49.551 15.93 1 45.22 ? O16 B35 449 B 1 HETATM 21 C C17 B35 . . . E 2 32.077 50.465 17.002 1 44.99 ? C17 B35 449 B 1 HETATM 22 C C18 B35 . . . E 2 29.903 47.996 10.072 1 41.89 ? C18 B35 449 B 1 HETATM 23 N N19 B35 . . . E 2 29.778 49.338 10.125 1 41.76 ? N19 B35 449 B 1 HETATM 24 C C20 B35 . . . E 2 30.476 49.803 11.184 1 41.89 ? C20 B35 449 B 1 HETATM 25 N N21 B35 . . . E 2 29.357 47.179 9.16 1 41.51 ? N21 B35 449 B 1 HETATM 26 N N22 B35 . . . E 2 26.565 48.17 14.821 1 45.44 ? N22 B35 449 B 1 HETATM 27 O O23 B35 . . . E 2 26.372 47.038 14.035 1 45.53 ? O23 B35 449 B 1 HETATM 28 O O24 B35 . . . E 2 25.532 48.952 15.326 1 45.76 ? O24 B35 449 B 1 # _model_server_stats.io_time_ms 58 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 324 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 28 #