data_3H0M # _model_server_result.job_id mSdNI4T8jdaR1GoTorxf4w _model_server_result.datetime_utc '2024-12-27 12:11:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3h0m # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"HA","auth_seq_id":479}' # _entry.id 3H0M # _exptl.entry_id 3H0M _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90.01 _cell.angle_beta 89.96 _cell.angle_gamma 90.11 _cell.entry_id 3H0M _cell.length_a 128.248 _cell.length_b 129.856 _cell.length_c 155.069 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3H0M _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA trimeric 3 author_and_software_defined_assembly 1 PISA trimeric 3 author_and_software_defined_assembly 2 PISA trimeric 3 author_and_software_defined_assembly 3 PISA trimeric 3 author_and_software_defined_assembly 4 PISA trimeric 3 author_and_software_defined_assembly 5 PISA trimeric 3 author_and_software_defined_assembly 6 PISA trimeric 3 author_and_software_defined_assembly 7 PISA trimeric 3 author_and_software_defined_assembly 8 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,Y,Z,AA 1 1 D,E,F,BA,CA 2 1 G,H,I,DA,EA,FA 3 1 J,K,L,GA,HA,IA 4 1 M,N,O,JA,KA,LA 5 1 P,Q,R,MA,NA,OA 6 1 S,T,U,PA,QA,RA 7 1 V,W,X,SA,TA,UA 8 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 Z N N ? 5 EA N N ? 5 HA N N ? 5 KA N N ? 5 NA N N ? 5 QA N N ? 5 TA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B NE2 HIS 14 B HIS 14 1_555 Z MG MG . B MG 479 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? metalc ? metalc2 B SG CYS 25 B CYS 25 1_555 AA ZN ZN . B ZN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.271 ? metalc ? metalc3 B SG CYS 27 B CYS 27 1_555 AA ZN ZN . B ZN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.118 ? metalc ? metalc4 B SG CYS 40 B CYS 40 1_555 AA ZN ZN . B ZN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.651 ? metalc ? metalc5 B SG CYS 43 B CYS 43 1_555 AA ZN ZN . B ZN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.601 ? metalc ? metalc6 B OE2 GLU 127 B GLU 127 1_555 Z MG MG . B MG 479 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.158 ? metalc ? metalc7 B OE1 GLU 153 B GLU 153 1_555 Z MG MG . B MG 479 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.766 ? metalc ? metalc8 E SG CYS 25 E CYS 25 1_555 CA ZN ZN . E ZN 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.336 ? metalc ? metalc9 E SG CYS 27 E CYS 27 1_555 CA ZN ZN . E ZN 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.329 ? metalc ? metalc10 E SG CYS 40 E CYS 40 1_555 CA ZN ZN . E ZN 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? metalc ? metalc11 E SG CYS 43 E CYS 43 1_555 CA ZN ZN . E ZN 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? metalc ? metalc12 H NE2 HIS 14 H HIS 14 1_555 EA MG MG . H MG 479 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? metalc ? metalc13 H SG CYS 25 H CYS 25 1_555 FA ZN ZN . H ZN 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.352 ? metalc ? metalc14 H SG CYS 27 H CYS 27 1_555 FA ZN ZN . H ZN 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.252 ? metalc ? metalc15 H SG CYS 40 H CYS 40 1_555 FA ZN ZN . H ZN 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.41 ? metalc ? metalc16 H SG CYS 43 H CYS 43 1_555 FA ZN ZN . H ZN 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? metalc ? metalc17 H OE2 GLU 127 H GLU 127 1_555 EA MG MG . H MG 479 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.398 ? metalc ? metalc18 H OE1 GLU 153 H GLU 153 1_555 EA MG MG . H MG 479 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.16 ? metalc ? metalc19 K NE2 HIS 14 K HIS 14 1_555 HA MG MG . K MG 479 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.728 ? metalc ? metalc20 K SG CYS 25 K CYS 25 1_555 IA ZN ZN . K ZN 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.232 ? metalc ? metalc21 K SG CYS 27 K CYS 27 1_555 IA ZN ZN . K ZN 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? metalc ? metalc22 K SG CYS 40 K CYS 40 1_555 IA ZN ZN . K ZN 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? metalc ? metalc23 K SG CYS 43 K CYS 43 1_555 IA ZN ZN . K ZN 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.385 ? metalc ? metalc24 K OE2 GLU 127 K GLU 127 1_555 HA MG MG . K MG 479 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.426 ? metalc ? metalc25 K OE1 GLU 153 K GLU 153 1_555 HA MG MG . K MG 479 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.604 ? metalc ? metalc26 N NE2 HIS 14 N HIS 14 1_555 KA MG MG . N MG 479 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.941 ? metalc ? metalc27 N SG CYS 25 N CYS 25 1_555 LA ZN ZN . N ZN 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.171 ? metalc ? metalc28 N SG CYS 27 N CYS 27 1_555 LA ZN ZN . N ZN 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? metalc ? metalc29 N SG CYS 40 N CYS 40 1_555 LA ZN ZN . N ZN 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.455 ? metalc ? metalc30 N SG CYS 43 N CYS 43 1_555 LA ZN ZN . N ZN 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.227 ? metalc ? metalc31 N OE2 GLU 127 N GLU 127 1_555 KA MG MG . N MG 479 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.23 ? metalc ? metalc32 N OE1 GLU 153 N GLU 153 1_555 KA MG MG . N MG 479 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.842 ? metalc ? metalc33 Q NE2 HIS 14 Q HIS 14 1_555 NA MG MG . Q MG 479 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.789 ? metalc ? metalc34 Q SG CYS 25 Q CYS 25 1_555 OA ZN ZN . Q ZN 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? metalc ? metalc35 Q SG CYS 27 Q CYS 27 1_555 OA ZN ZN . Q ZN 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.135 ? metalc ? metalc36 Q SG CYS 40 Q CYS 40 1_555 OA ZN ZN . Q ZN 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.456 ? metalc ? metalc37 Q SG CYS 43 Q CYS 43 1_555 OA ZN ZN . Q ZN 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.487 ? metalc ? metalc38 Q OE2 GLU 127 Q GLU 127 1_555 NA MG MG . Q MG 479 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.197 ? metalc ? metalc39 Q OE1 GLU 153 Q GLU 153 1_555 NA MG MG . Q MG 479 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? metalc ? metalc40 T NE2 HIS 14 T HIS 14 1_555 QA MG MG . T MG 479 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? metalc ? metalc41 T SG CYS 25 T CYS 25 1_555 RA ZN ZN . T ZN 907 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.391 ? metalc ? metalc42 T SG CYS 27 T CYS 27 1_555 RA ZN ZN . T ZN 907 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.157 ? metalc ? metalc43 T SG CYS 40 T CYS 40 1_555 RA ZN ZN . T ZN 907 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.336 ? metalc ? metalc44 T SG CYS 43 T CYS 43 1_555 RA ZN ZN . T ZN 907 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.118 ? metalc ? metalc45 T OE2 GLU 127 T GLU 127 1_555 QA MG MG . T MG 479 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.385 ? metalc ? metalc46 T OE1 GLU 153 T GLU 153 1_555 QA MG MG . T MG 479 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.905 ? metalc ? metalc47 W NE2 HIS 14 W HIS 14 1_555 TA MG MG . W MG 479 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.842 ? metalc ? metalc48 W SG CYS 25 W CYS 25 1_555 UA ZN ZN . W ZN 908 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? metalc ? metalc49 W SG CYS 27 W CYS 27 1_555 UA ZN ZN . W ZN 908 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? metalc ? metalc50 W SG CYS 40 W CYS 40 1_555 UA ZN ZN . W ZN 908 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? metalc ? metalc51 W SG CYS 43 W CYS 43 1_555 UA ZN ZN . W ZN 908 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.344 ? metalc ? metalc52 W OE2 GLU 127 W GLU 127 1_555 TA MG MG . W MG 479 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.981 ? metalc ? metalc53 W OE1 GLU 153 W GLU 153 1_555 TA MG MG . W MG 479 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.232 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3H0M _atom_sites.fract_transf_matrix[1][1] 0.007797 _atom_sites.fract_transf_matrix[1][2] 0.000015 _atom_sites.fract_transf_matrix[1][3] -0.000006 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007701 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006449 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code Y 4 GLN A 1 901 901 GLN GLN . Z 5 MG B 1 479 101 MG MG . AA 6 ZN B 1 901 901 ZN ZN . BA 4 GLN D 1 902 902 GLN GLN . CA 6 ZN E 1 902 902 ZN ZN . DA 4 GLN G 1 903 903 GLN GLN . EA 5 MG H 1 479 103 MG MG . FA 6 ZN H 1 903 903 ZN ZN . GA 4 GLN J 1 904 904 GLN GLN . HA 5 MG K 1 479 104 MG MG . IA 6 ZN K 1 904 904 ZN ZN . JA 4 GLN M 1 905 905 GLN GLN . KA 5 MG N 1 479 105 MG MG . LA 6 ZN N 1 905 905 ZN ZN . MA 4 GLN P 1 906 906 GLN GLN . NA 5 MG Q 1 479 106 MG MG . OA 6 ZN Q 1 906 906 ZN ZN . PA 4 GLN S 1 907 907 GLN GLN . QA 5 MG T 1 479 107 MG MG . RA 6 ZN T 1 907 907 ZN ZN . SA 4 GLN V 1 908 908 GLN GLN . TA 5 MG W 1 479 108 MG MG . UA 6 ZN W 1 908 908 ZN ZN . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id HA _atom_site.label_entity_id 5 _atom_site.Cartn_x -130.855 _atom_site.Cartn_y 17.034 _atom_site.Cartn_z 21.006 _atom_site.occupancy 0.5 _atom_site.B_iso_or_equiv 53.91 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 479 _atom_site.auth_asym_id K _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 28 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 461 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #