data_3H0V # _model_server_result.job_id elqgKYc41Z1ROoVD_eQDhg _model_server_result.datetime_utc '2024-11-29 05:19:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3h0v # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":68}' # _entry.id 3H0V # _exptl.entry_id 3H0V _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 88.062 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PYRUVIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 105.03 _cell.angle_gamma 90 _cell.entry_id 3H0V _cell.length_a 93.852 _cell.length_b 49.535 _cell.length_c 69.998 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3H0V _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id E _struct_conn.ptnr1_label_atom_id C _struct_conn.ptnr1_label_comp_id PYR _struct_conn.ptnr1_label_seq_id . _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id PYR _struct_conn.ptnr1_auth_seq_id 68 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id N _struct_conn.ptnr2_label_comp_id SER _struct_conn.ptnr2_label_seq_id 1 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id SER _struct_conn.ptnr2_auth_seq_id 69 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.528 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C3 H4 O3' _chem_comp.formula_weight 88.062 _chem_comp.id PYR _chem_comp.mon_nstd_flag . _chem_comp.name 'PYRUVIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O PYR doub 336 n n C OXT PYR sing 337 n n C CA PYR sing 338 n n OXT HXT PYR sing 339 n n CA O3 PYR doub 340 n n CA CB PYR sing 341 n n CB HB1 PYR sing 342 n n CB HB2 PYR sing 343 n n CB HB3 PYR sing 344 n n # _atom_sites.entry_id 3H0V _atom_sites.fract_transf_matrix[1][1] 0.010655 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002862 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020188 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014792 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 PUT B 1 350 350 PUT PUT . D 4 M2T A 1 368 368 M2T M2T . E 5 PYR A 1 68 68 PYR PYR . F 6 HOH B 1 68 8 HOH HOH . F 6 HOH B 2 69 10 HOH HOH . F 6 HOH B 3 70 17 HOH HOH . F 6 HOH B 4 71 71 HOH HOH . F 6 HOH B 5 72 27 HOH HOH . F 6 HOH B 6 73 30 HOH HOH . F 6 HOH B 7 74 32 HOH HOH . F 6 HOH B 8 75 35 HOH HOH . F 6 HOH B 9 76 37 HOH HOH . F 6 HOH B 10 77 42 HOH HOH . F 6 HOH B 11 78 78 HOH HOH . F 6 HOH B 12 79 79 HOH HOH . F 6 HOH B 13 80 52 HOH HOH . F 6 HOH B 14 81 55 HOH HOH . F 6 HOH B 15 82 82 HOH HOH . F 6 HOH B 16 83 59 HOH HOH . F 6 HOH B 17 84 60 HOH HOH . F 6 HOH B 18 85 61 HOH HOH . F 6 HOH B 19 86 65 HOH HOH . G 6 HOH A 1 1 1 HOH HOH . G 6 HOH A 2 2 2 HOH HOH . G 6 HOH A 3 3 3 HOH HOH . G 6 HOH A 4 4 4 HOH HOH . G 6 HOH A 5 5 5 HOH HOH . G 6 HOH A 6 6 6 HOH HOH . G 6 HOH A 7 7 7 HOH HOH . G 6 HOH A 8 9 9 HOH HOH . G 6 HOH A 9 11 11 HOH HOH . G 6 HOH A 10 12 12 HOH HOH . G 6 HOH A 11 13 13 HOH HOH . G 6 HOH A 12 14 14 HOH HOH . G 6 HOH A 13 15 15 HOH HOH . G 6 HOH A 14 16 16 HOH HOH . G 6 HOH A 15 18 18 HOH HOH . G 6 HOH A 16 19 19 HOH HOH . G 6 HOH A 17 20 20 HOH HOH . G 6 HOH A 18 21 21 HOH HOH . G 6 HOH A 19 22 22 HOH HOH . G 6 HOH A 20 23 23 HOH HOH . G 6 HOH A 21 24 24 HOH HOH . G 6 HOH A 22 25 25 HOH HOH . G 6 HOH A 23 26 26 HOH HOH . G 6 HOH A 24 28 28 HOH HOH . G 6 HOH A 25 29 29 HOH HOH . G 6 HOH A 26 31 31 HOH HOH . G 6 HOH A 27 34 34 HOH HOH . G 6 HOH A 28 36 36 HOH HOH . G 6 HOH A 29 38 38 HOH HOH . G 6 HOH A 30 40 40 HOH HOH . G 6 HOH A 31 43 43 HOH HOH . G 6 HOH A 32 44 44 HOH HOH . G 6 HOH A 33 45 45 HOH HOH . G 6 HOH A 34 46 46 HOH HOH . G 6 HOH A 35 47 47 HOH HOH . G 6 HOH A 36 48 48 HOH HOH . G 6 HOH A 37 49 49 HOH HOH . G 6 HOH A 38 50 50 HOH HOH . G 6 HOH A 39 51 51 HOH HOH . G 6 HOH A 40 54 54 HOH HOH . G 6 HOH A 41 56 56 HOH HOH . G 6 HOH A 42 57 57 HOH HOH . G 6 HOH A 43 58 58 HOH HOH . G 6 HOH A 44 63 63 HOH HOH . G 6 HOH A 45 64 64 HOH HOH . G 6 HOH A 46 66 66 HOH HOH . G 6 HOH A 47 67 67 HOH HOH . G 6 HOH A 48 335 68 HOH HOH . G 6 HOH A 49 336 69 HOH HOH . G 6 HOH A 50 337 70 HOH HOH . G 6 HOH A 51 338 74 HOH HOH . G 6 HOH A 52 339 76 HOH HOH . G 6 HOH A 53 340 77 HOH HOH . G 6 HOH A 54 341 80 HOH HOH . G 6 HOH A 55 342 81 HOH HOH . G 6 HOH A 56 343 83 HOH HOH . G 6 HOH A 57 344 84 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C PYR . . . E 5 -22.535 -10.795 10.916 1 44.8 ? C PYR 68 A 1 HETATM 2 O O PYR . . . E 5 -23.062 -10.751 9.82 1 38.31 ? O PYR 68 A 1 HETATM 3 C CA PYR . . . E 5 -21.365 -10.001 11.164 1 47.7 ? CA PYR 68 A 1 HETATM 4 O O3 PYR . . . E 5 -20.974 -9.302 10.239 1 50.42 ? O3 PYR 68 A 1 HETATM 5 C CB PYR . . . E 5 -20.501 -9.865 12.375 1 49.26 ? CB PYR 68 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 266 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #