data_3H1E # _model_server_result.job_id 2faG7O3PUoHzyDg0UlrtTg _model_server_result.datetime_utc '2025-08-31 12:52:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3h1e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":301}' # _entry.id 3H1E # _exptl.entry_id 3H1E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 66.007 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'BERYLLIUM TRIFLUORIDE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 106.95 _cell.angle_gamma 90 _cell.entry_id 3H1E _cell.length_a 69.956 _cell.length_b 38.098 _cell.length_c 38.885 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3H1E _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id metalc _struct_conn.details ? _struct_conn.id metalc1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id OD1 _struct_conn.ptnr1_label_comp_id ASP _struct_conn.ptnr1_label_seq_id 58 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id ASP _struct_conn.ptnr1_auth_seq_id 53 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id D _struct_conn.ptnr2_label_atom_id BE _struct_conn.ptnr2_label_comp_id BEF _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id BEF _struct_conn.ptnr2_auth_seq_id 301 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.835 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'Be F3 -1' _chem_comp.formula_weight 66.007 _chem_comp.id BEF _chem_comp.mon_nstd_flag . _chem_comp.name 'BERYLLIUM TRIFLUORIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag BE F1 BEF sing 70 n n BE F2 BEF sing 71 n n BE F3 BEF sing 72 n n # _atom_sites.entry_id 3H1E _atom_sites.fract_transf_matrix[1][1] 0.014295 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004356 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.026248 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.026885 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 201 201 MG MG . C 2 MG A 1 202 202 MG MG . D 3 BEF A 1 301 301 BEF BEF . E 4 SO4 A 1 501 501 SO4 SO4 . F 5 HOH A 1 125 1 HOH HOH . F 5 HOH A 2 126 2 HOH HOH . F 5 HOH A 3 127 3 HOH HOH . F 5 HOH A 4 128 4 HOH HOH . F 5 HOH A 5 129 5 HOH HOH . F 5 HOH A 6 130 6 HOH HOH . F 5 HOH A 7 131 7 HOH HOH . F 5 HOH A 8 132 8 HOH HOH . F 5 HOH A 9 133 9 HOH HOH . F 5 HOH A 10 134 10 HOH HOH . F 5 HOH A 11 135 12 HOH HOH . F 5 HOH A 12 136 13 HOH HOH . F 5 HOH A 13 137 14 HOH HOH . F 5 HOH A 14 138 15 HOH HOH . F 5 HOH A 15 139 16 HOH HOH . F 5 HOH A 16 140 17 HOH HOH . F 5 HOH A 17 141 18 HOH HOH . F 5 HOH A 18 142 19 HOH HOH . F 5 HOH A 19 143 20 HOH HOH . F 5 HOH A 20 144 21 HOH HOH . F 5 HOH A 21 145 22 HOH HOH . F 5 HOH A 22 146 23 HOH HOH . F 5 HOH A 23 147 24 HOH HOH . F 5 HOH A 24 148 25 HOH HOH . F 5 HOH A 25 149 26 HOH HOH . F 5 HOH A 26 150 27 HOH HOH . F 5 HOH A 27 151 28 HOH HOH . F 5 HOH A 28 152 30 HOH HOH . F 5 HOH A 29 153 32 HOH HOH . F 5 HOH A 30 154 33 HOH HOH . F 5 HOH A 31 155 34 HOH HOH . F 5 HOH A 32 156 35 HOH HOH . F 5 HOH A 33 157 36 HOH HOH . F 5 HOH A 34 158 37 HOH HOH . F 5 HOH A 35 159 38 HOH HOH . F 5 HOH A 36 160 39 HOH HOH . F 5 HOH A 37 161 40 HOH HOH . F 5 HOH A 38 162 41 HOH HOH . F 5 HOH A 39 163 42 HOH HOH . F 5 HOH A 40 164 43 HOH HOH . F 5 HOH A 41 165 44 HOH HOH . F 5 HOH A 42 166 45 HOH HOH . F 5 HOH A 43 167 46 HOH HOH . F 5 HOH A 44 168 47 HOH HOH . F 5 HOH A 45 169 48 HOH HOH . F 5 HOH A 46 170 49 HOH HOH . F 5 HOH A 47 171 50 HOH HOH . F 5 HOH A 48 172 51 HOH HOH . F 5 HOH A 49 173 53 HOH HOH . F 5 HOH A 50 174 54 HOH HOH . F 5 HOH A 51 175 55 HOH HOH . F 5 HOH A 52 176 60 HOH HOH . F 5 HOH A 53 177 65 HOH HOH . F 5 HOH A 54 178 67 HOH HOH . F 5 HOH A 55 179 81 HOH HOH . F 5 HOH A 56 180 82 HOH HOH . F 5 HOH A 57 181 83 HOH HOH . F 5 HOH A 58 182 85 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 BE BE BEF . . . D 3 -17.277 8.365 -15.762 1 2 ? BE BEF 301 A 1 HETATM 2 F F1 BEF . . . D 3 -18.415 8.853 -14.537 1 6.25 ? F1 BEF 301 A 1 HETATM 3 F F2 BEF . . . D 3 -17.836 8.341 -17.423 1 4.46 ? F2 BEF 301 A 1 HETATM 4 F F3 BEF . . . D 3 -15.633 8.838 -15.437 1 2 ? F3 BEF 301 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 341 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #