data_3H1K # _model_server_result.job_id XqfPPt2L_NIqiGhsQa6kBQ _model_server_result.datetime_utc '2024-11-23 17:33:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3h1k # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"DA","auth_seq_id":2012}' # _entry.id 3H1K # _exptl.entry_id 3H1K _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 17 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3H1K _cell.length_a 171.717 _cell.length_b 181.297 _cell.length_c 241.288 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3H1K _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details eicosameric _pdbx_struct_assembly.oligomeric_count 20 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 17 DA N N ? 17 VA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 E SG CYS 144 E CYS 144 1_555 E SG CYS 160 E CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf2 H SG CYS 23 H CYS 24 1_555 H SG CYS 67 H CYS 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? disulf ? disulf3 H SG CYS 39 H CYS 40 1_555 H SG CYS 53 H CYS 54 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf4 O SG CYS 144 R CYS 144 1_555 O SG CYS 160 R CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf5 R SG CYS 23 U CYS 24 1_555 R SG CYS 67 U CYS 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf6 R SG CYS 39 U CYS 40 1_555 R SG CYS 53 U CYS 54 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? metalc ? metalc1 C NE2 HIS 84 C HIS 84 1_555 X FE HEM . C HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.001 ? metalc ? metalc2 C NE2 HIS 98 C HIS 98 1_555 Y FE HEM . C HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? metalc ? metalc3 C NE2 HIS 183 C HIS 183 1_555 X FE HEM . C HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.996 ? metalc ? metalc4 C NE2 HIS 197 C HIS 197 1_555 Y FE HEM . C HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.996 ? metalc ? metalc5 C OD2 ASP 253 C ASP 253 1_555 DA ZN ZN . C ZN 2012 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.57 ? metalc ? metalc6 C OE1 GLU 255 C GLU 255 1_555 DA ZN ZN . C ZN 2012 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? metalc ? metalc7 C NE2 HIS 268 C HIS 268 1_555 DA ZN ZN . C ZN 2012 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.46 ? metalc ? metalc8 DA ZN ZN . C ZN 2012 1_555 D NE2 HIS 121 D HIS 121 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.385 ? metalc ? metalc9 D NE2 HIS 41 D HIS 41 1_555 GA FE HEC . D HEC 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.997 ? metalc ? metalc10 D SD MET 160 D MET 160 1_555 GA FE HEC . D HEC 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? metalc ? metalc11 E SG CYS 139 E CYS 139 1_555 KA FE1 FES . E FES 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? metalc ? metalc12 E ND1 HIS 141 E HIS 141 1_555 KA FE2 FES . E FES 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? metalc ? metalc13 E SG CYS 158 E CYS 158 1_555 KA FE1 FES . E FES 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? metalc ? metalc14 E ND1 HIS 161 E HIS 161 1_555 KA FE2 FES . E FES 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.108 ? metalc ? metalc15 M NE2 HIS 84 P HIS 84 1_555 NA FE HEM . P HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.999 ? metalc ? metalc16 M NE2 HIS 98 P HIS 98 1_555 OA FE HEM . P HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.007 ? metalc ? metalc17 M NE2 HIS 183 P HIS 183 1_555 NA FE HEM . P HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.995 ? metalc ? metalc18 M NE2 HIS 197 P HIS 197 1_555 OA FE HEM . P HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2 ? metalc ? metalc19 M OE1 GLU 255 P GLU 255 1_555 VA ZN ZN . P ZN 3012 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.122 ? metalc ? metalc20 M NE2 HIS 268 P HIS 268 1_555 VA ZN ZN . P ZN 3012 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.157 ? metalc ? metalc21 VA ZN ZN . P ZN 3012 1_555 N NE2 HIS 121 Q HIS 121 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? metalc ? metalc22 N NE2 HIS 41 Q HIS 41 1_555 ZA FE HEC . Q HEC 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.003 ? metalc ? metalc23 N SD MET 160 Q MET 160 1_555 ZA FE HEC . Q HEC 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? metalc ? metalc24 O SG CYS 139 R CYS 139 1_555 CB FE1 FES . R FES 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? metalc ? metalc25 O ND1 HIS 141 R HIS 141 1_555 CB FE2 FES . R FES 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? metalc ? metalc26 O SG CYS 158 R CYS 158 1_555 CB FE1 FES . R FES 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? metalc ? metalc27 O ND1 HIS 161 R HIS 161 1_555 CB FE2 FES . R FES 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.117 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3H1K _atom_sites.fract_transf_matrix[1][1] 0.005824 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005516 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004144 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code U 11 PEE A 1 2008 2008 PEE PEE . V 12 UNL A 1 3284 3284 UNL UNL . W 12 UNL A 1 3231 3231 UNL UNL . X 13 HEM C 1 501 501 HEM HEM . Y 13 HEM C 1 502 502 HEM HEM . Z 14 IKR C 1 2001 2001 IKR IKR . AA 15 UQ C 1 2002 2002 UQ UQ . BA 16 CDL C 1 2004 2004 CDL CDL . CA 11 PEE C 1 2007 2007 PEE PEE . DA 17 ZN C 1 2012 2012 ZN ZN . EA 18 GOL C 1 2011 2011 GOL GOL . FA 12 UNL C 1 4234 4234 UNL UNL . GA 19 HEC D 1 501 501 HEC HEC . HA 16 CDL D 1 2003 2003 CDL CDL . IA 20 BOG D 1 2009 2009 BOG BOG . JA 20 BOG D 1 2091 2091 BOG BOG . KA 21 FES E 1 501 501 FES FES . LA 11 PEE E 1 2005 2005 PEE PEE . MA 12 UNL N 1 4231 4231 UNL UNL . NA 13 HEM P 1 501 501 HEM HEM . OA 13 HEM P 1 502 502 HEM HEM . PA 20 BOG P 1 2010 2010 BOG BOG . QA 14 IKR P 1 3001 3001 IKR IKR . RA 15 UQ P 1 3002 3002 UQ UQ . SA 16 CDL P 1 3004 3004 CDL CDL . TA 11 PEE P 1 3007 3007 PEE PEE . UA 11 PEE P 1 3008 3008 PEE PEE . VA 17 ZN P 1 3012 3012 ZN ZN . WA 20 BOG P 1 3091 3091 BOG BOG . XA 18 GOL P 1 3011 3011 GOL GOL . YA 12 UNL P 1 4236 4236 UNL UNL . ZA 19 HEC Q 1 501 501 HEC HEC . AB 16 CDL Q 1 3003 3003 CDL CDL . BB 20 BOG Q 1 3009 3009 BOG BOG . CB 21 FES R 1 501 501 FES FES . DB 11 PEE R 1 3005 3005 PEE PEE . EB 22 HOH A 1 1230 1230 HOH HOH . FB 22 HOH C 1 381 381 HOH HOH . FB 22 HOH C 2 382 382 HOH HOH . FB 22 HOH C 3 383 383 HOH HOH . FB 22 HOH C 4 384 384 HOH HOH . FB 22 HOH C 5 385 385 HOH HOH . FB 22 HOH C 6 1008 1008 HOH HOH . FB 22 HOH C 7 1238 1238 HOH HOH . GB 22 HOH E 1 1289 1289 HOH HOH . HB 22 HOH P 1 381 381 HOH HOH . HB 22 HOH P 2 382 382 HOH HOH . HB 22 HOH P 3 383 383 HOH HOH . HB 22 HOH P 4 384 384 HOH HOH . HB 22 HOH P 5 385 385 HOH HOH . HB 22 HOH P 6 959 959 HOH HOH . HB 22 HOH P 7 1239 1239 HOH HOH . IB 22 HOH R 1 1240 1240 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id DA _atom_site.label_entity_id 17 _atom_site.Cartn_x 3.774 _atom_site.Cartn_y 140.906 _atom_site.Cartn_z 70.68 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 104.46 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 2012 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 50 _model_server_stats.query_time_ms 313 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #