data_3H1L # _model_server_result.job_id -F0LxaLrcQZhmZKxaqzv3w _model_server_result.datetime_utc '2024-11-05 06:41:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3h1l # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"RA","auth_seq_id":3001}' # _entry.id 3H1L # _exptl.entry_id 3H1L _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 404.927 _entity.id 14 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-chloro-4,6-dihydroxy-2-methyl-5-{(2E,4E)-3-methyl-5-[(1R,2R,6R)-1,2,6-trimethyl-3-oxocyclohexyl]penta-2,4-dien-1-yl}benzaldehyde _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3H1L _cell.length_a 174.139 _cell.length_b 182.364 _cell.length_c 241.626 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3H1L _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details eicosameric _pdbx_struct_assembly.oligomeric_count 20 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 14 Y N N ? 14 Z N N ? 14 RA N N ? 14 SA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 E SG CYS 144 E CYS 144 1_555 E SG CYS 160 E CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 H SG CYS 23 H CYS 24 1_555 H SG CYS 67 H CYS 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? disulf ? disulf3 H SG CYS 39 H CYS 40 1_555 H SG CYS 53 H CYS 54 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? disulf ? disulf4 O SG CYS 144 R CYS 144 1_555 O SG CYS 160 R CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf5 R SG CYS 23 U CYS 24 1_555 R SG CYS 67 U CYS 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf6 R SG CYS 39 U CYS 40 1_555 R SG CYS 53 U CYS 54 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? metalc ? metalc1 C NE2 HIS 84 C HIS 84 1_555 W FE HEM . C HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.003 ? metalc ? metalc2 C NE2 HIS 98 C HIS 98 1_555 X FE HEM . C HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? metalc ? metalc3 C NE2 HIS 183 C HIS 183 1_555 W FE HEM . C HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? metalc ? metalc4 C NE2 HIS 197 C HIS 197 1_555 X FE HEM . C HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? metalc ? metalc5 D NE2 HIS 41 D HIS 41 1_555 HA FE HEC . D HEC 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.003 ? metalc ? metalc6 D SD MET 160 D MET 160 1_555 HA FE HEC . D HEC 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.188 ? metalc ? metalc7 E SG CYS 139 E CYS 139 1_555 JA FE1 FES . E FES 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.286 ? metalc ? metalc8 E ND1 HIS 141 E HIS 141 1_555 JA FE2 FES . E FES 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.108 ? metalc ? metalc9 E SG CYS 158 E CYS 158 1_555 JA FE1 FES . E FES 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.251 ? metalc ? metalc10 E ND1 HIS 161 E HIS 161 1_555 JA FE2 FES . E FES 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? metalc ? metalc11 M NE2 HIS 84 P HIS 84 1_555 NA FE HEM . P HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.003 ? metalc ? metalc12 M NE2 HIS 98 P HIS 98 1_555 OA FE HEM . P HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? metalc ? metalc13 M NE2 HIS 183 P HIS 183 1_555 NA FE HEM . P HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? metalc ? metalc14 M NE2 HIS 197 P HIS 197 1_555 OA FE HEM . P HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.003 ? metalc ? metalc15 N NE2 HIS 41 Q HIS 41 1_555 AB FE HEC . Q HEC 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.001 ? metalc ? metalc16 N SD MET 160 Q MET 160 1_555 AB FE HEC . Q HEC 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.129 ? metalc ? metalc17 O SG CYS 139 R CYS 139 1_555 BB FE1 FES . R FES 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? metalc ? metalc18 O ND1 HIS 141 R HIS 141 1_555 BB FE2 FES . R FES 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.099 ? metalc ? metalc19 O SG CYS 158 R CYS 158 1_555 BB FE1 FES . R FES 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.234 ? metalc ? metalc20 O ND1 HIS 161 R HIS 161 1_555 BB FE2 FES . R FES 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? # _chem_comp.formula 'C23 H29 Cl O4' _chem_comp.formula_weight 404.927 _chem_comp.id 3H1 _chem_comp.mon_nstd_flag . _chem_comp.name 3-chloro-4,6-dihydroxy-2-methyl-5-{(2E,4E)-3-methyl-5-[(1R,2R,6R)-1,2,6-trimethyl-3-oxocyclohexyl]penta-2,4-dien-1-yl}benzaldehyde _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ASCOCHLORIN # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C01 C02 3H1 doub 1 n y C01 C06 3H1 sing 2 n y C01 O09 3H1 sing 3 n n C02 C03 3H1 sing 4 n y C02 C07 3H1 sing 5 n n C03 C04 3H1 doub 6 n y C03 C08 3H1 sing 7 n n C04 C05 3H1 sing 8 n y C04 CL12 3H1 sing 9 n n C05 C06 3H1 doub 10 n y C05 O11 3H1 sing 11 n n C06 C13 3H1 sing 12 n n C07 O10 3H1 doub 13 n n C07 H07 3H1 sing 14 n n C08 H08 3H1 sing 15 n n C08 H08A 3H1 sing 16 n n C08 H08B 3H1 sing 17 n n O09 HO09 3H1 sing 18 n n O11 HO11 3H1 sing 19 n n C13 C14 3H1 sing 20 n n C13 H13 3H1 sing 21 n n C13 H13A 3H1 sing 22 n n C14 C15 3H1 doub 23 e n C14 H14 3H1 sing 24 n n C15 C16 3H1 sing 25 n n C15 C17 3H1 sing 26 n n C16 H16 3H1 sing 27 n n C16 H16A 3H1 sing 28 n n C16 H16B 3H1 sing 29 n n C17 C18 3H1 doub 30 e n C18 C19 3H1 sing 31 n n C18 H18 3H1 sing 32 n n C19 C20 3H1 sing 33 n n C19 C24 3H1 sing 34 n n C19 C28 3H1 sing 35 n n C20 C21 3H1 sing 36 n n C20 C25 3H1 sing 37 n n C20 H20 3H1 sing 38 n n C21 C22 3H1 sing 39 n n C21 H21 3H1 sing 40 n n C21 H21A 3H1 sing 41 n n C22 C23 3H1 sing 42 n n C22 H22 3H1 sing 43 n n C22 H22A 3H1 sing 44 n n C23 C24 3H1 sing 45 n n C23 O26 3H1 doub 46 n n C24 C27 3H1 sing 47 n n C24 H24 3H1 sing 48 n n C25 H25 3H1 sing 49 n n C25 H25A 3H1 sing 50 n n C25 H25B 3H1 sing 51 n n C27 H27 3H1 sing 52 n n C27 H27A 3H1 sing 53 n n C27 H27B 3H1 sing 54 n n C28 H28 3H1 sing 55 n n C28 H28A 3H1 sing 56 n n C28 H28B 3H1 sing 57 n n C17 H29 3H1 sing 58 n n # _atom_sites.entry_id 3H1L _atom_sites.fract_transf_matrix[1][1] 0.005743 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005484 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004139 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code U 11 PEE A 1 2008 2008 PEE PEE . V 12 UNL A 1 3016 3016 UNL UNL . W 13 HEM C 1 501 501 HEM HEM . X 13 HEM C 1 502 502 HEM HEM . Y 14 3H1 C 1 2001 2001 3H1 ACL . Z 14 3H1 C 1 2002 2002 3H1 ACL . AA 15 CDL C 1 2003 2003 CDL CDL . BA 11 PEE C 1 2007 2007 PEE PEE . CA 12 UNL C 1 2010 2010 UNL UNL . DA 12 UNL C 1 2104 2104 UNL UNL . EA 12 UNL C 1 3015 3015 UNL UNL . FA 12 UNL C 1 3106 3106 UNL UNL . GA 16 GOL C 1 2011 2011 GOL GOL . HA 17 HEC D 1 501 501 HEC HEC . IA 18 BOG D 1 2009 2009 BOG BOG . JA 19 FES E 1 501 501 FES FES . KA 11 PEE E 1 2005 2005 PEE PEE . LA 12 UNL E 1 2105 2105 UNL UNL . MA 15 CDL G 1 2004 2004 CDL CDL . NA 13 HEM P 1 501 501 HEM HEM . OA 13 HEM P 1 502 502 HEM HEM . PA 12 UNL P 1 2015 2015 UNL UNL . QA 12 UNL P 1 2106 2106 UNL UNL . RA 14 3H1 P 1 3001 3001 3H1 ACL . SA 14 3H1 P 1 3002 3002 3H1 ACL . TA 15 CDL P 1 3003 3003 CDL CDL . UA 11 PEE P 1 3007 3007 PEE PEE . VA 11 PEE P 1 3008 3008 PEE PEE . WA 12 UNL P 1 3010 3010 UNL UNL . XA 12 UNL P 1 3103 3103 UNL UNL . YA 12 UNL P 1 3104 3104 UNL UNL . ZA 16 GOL P 1 3011 3011 GOL GOL . AB 17 HEC Q 1 501 501 HEC HEC . BB 19 FES R 1 501 501 FES FES . CB 12 UNL R 1 2103 2103 UNL UNL . DB 11 PEE R 1 3005 3005 PEE PEE . EB 18 BOG R 1 3009 3009 BOG BOG . FB 15 CDL T 1 3004 3004 CDL CDL . GB 20 HOH B 1 1234 1234 HOH HOH . HB 20 HOH C 1 381 2 HOH HOH . HB 20 HOH C 2 382 108 HOH HOH . HB 20 HOH C 3 383 119 HOH HOH . HB 20 HOH C 4 384 168 HOH HOH . HB 20 HOH C 5 385 222 HOH HOH . HB 20 HOH C 6 1008 1008 HOH HOH . IB 20 HOH P 1 381 1 HOH HOH . IB 20 HOH P 2 382 28 HOH HOH . IB 20 HOH P 3 383 35 HOH HOH . IB 20 HOH P 4 384 109 HOH HOH . IB 20 HOH P 5 385 214 HOH HOH . IB 20 HOH P 6 959 959 HOH HOH . JB 20 HOH U 1 1233 1233 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 3H1 . . . RA 14 52.919 148.201 89.917 1 102.96 ? C01 3H1 3001 P 1 HETATM 2 C C02 3H1 . . . RA 14 51.924 149.178 90.271 1 102.29 ? C02 3H1 3001 P 1 HETATM 3 C C03 3H1 . . . RA 14 50.715 148.76 90.939 1 103.85 ? C03 3H1 3001 P 1 HETATM 4 C C04 3H1 . . . RA 14 50.517 147.376 91.238 1 104.72 ? C04 3H1 3001 P 1 HETATM 5 C C05 3H1 . . . RA 14 51.509 146.43 90.891 1 104.86 ? C05 3H1 3001 P 1 HETATM 6 C C06 3H1 . . . RA 14 52.727 146.821 90.219 1 104.33 ? C06 3H1 3001 P 1 HETATM 7 C C07 3H1 . . . RA 14 52.169 150.617 89.942 1 101.42 ? C07 3H1 3001 P 1 HETATM 8 C C08 3H1 . . . RA 14 49.608 149.772 91.346 1 105.24 ? C08 3H1 3001 P 1 HETATM 9 O O09 3H1 . . . RA 14 54.094 148.577 89.268 1 101.53 ? O09 3H1 3001 P 1 HETATM 10 O O10 3H1 . . . RA 14 53.157 151.059 89.382 1 103.39 ? O10 3H1 3001 P 1 HETATM 11 O O11 3H1 . . . RA 14 51.267 145.123 91.216 1 107.39 ? O11 3H1 3001 P 1 HETATM 12 CL CL12 3H1 . . . RA 14 49.04 146.775 92.059 1 104.57 ? CL12 3H1 3001 P 1 HETATM 13 C C13 3H1 . . . RA 14 53.832 145.758 89.831 1 104.87 ? C13 3H1 3001 P 1 HETATM 14 C C14 3H1 . . . RA 14 53.294 144.512 89.12 1 106.04 ? C14 3H1 3001 P 1 HETATM 15 C C15 3H1 . . . RA 14 53.122 143.223 89.554 1 107.16 ? C15 3H1 3001 P 1 HETATM 16 C C16 3H1 . . . RA 14 53.5 142.804 90.991 1 106.04 ? C16 3H1 3001 P 1 HETATM 17 C C17 3H1 . . . RA 14 52.589 142.354 88.654 1 108.46 ? C17 3H1 3001 P 1 HETATM 18 C C18 3H1 . . . RA 14 52.284 141.036 88.759 1 109.58 ? C18 3H1 3001 P 1 HETATM 19 C C19 3H1 . . . RA 14 51.653 140.057 87.7 1 110.55 ? C19 3H1 3001 P 1 HETATM 20 C C20 3H1 . . . RA 14 52.725 138.895 87.336 1 111.33 ? C20 3H1 3001 P 1 HETATM 21 C C21 3H1 . . . RA 14 52.069 137.731 86.497 1 112.36 ? C21 3H1 3001 P 1 HETATM 22 C C22 3H1 . . . RA 14 50.724 137.161 87.054 1 112.52 ? C22 3H1 3001 P 1 HETATM 23 C C23 3H1 . . . RA 14 49.742 138.272 87.509 1 112.26 ? C23 3H1 3001 P 1 HETATM 24 C C24 3H1 . . . RA 14 50.317 139.453 88.375 1 111.2 ? C24 3H1 3001 P 1 HETATM 25 C C25 3H1 . . . RA 14 53.981 139.353 86.525 1 111.77 ? C25 3H1 3001 P 1 HETATM 26 O O26 3H1 . . . RA 14 48.55 138.212 87.182 1 112.41 ? O26 3H1 3001 P 1 HETATM 27 C C27 3H1 . . . RA 14 49.133 140.453 88.635 1 110.61 ? C27 3H1 3001 P 1 HETATM 28 C C28 3H1 . . . RA 14 51.291 140.931 86.428 1 109.69 ? C28 3H1 3001 P 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 52 _model_server_stats.query_time_ms 354 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 28 #