data_3H1Q
#
_model_server_result.job_id            OucVji8V6zSidKEgZJTE0g 
_model_server_result.datetime_utc      '2025-02-27 12:07:12' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3h1q 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":301}' 
#
_entry.id    3H1Q 
#
_exptl.entry_id    3H1Q 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              507.181 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "ADENOSINE-5'-TRIPHOSPHATE" 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3H1Q 
_cell.length_a            128.912 
_cell.length_b            128.912 
_cell.length_c            104.922 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3H1Q 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        94 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 42 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 software_defined_assembly 1 
PISA monomeric 1 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C ALA 3 A ALA 0 1_555 A N MSE 4 A MSE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale2 A C MSE 4 A MSE 1 1_555 A N GLU 5 A GLU 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? 
covale ? covale3 A C ILE 202 A ILE 199 1_555 A N MSE 203 A MSE 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale4 A C MSE 203 A MSE 200 1_555 A N ARG 204 A ARG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale5 A C LYS 212 A LYS 209 1_555 A N MSE 213 A MSE 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale6 A C MSE 213 A MSE 210 1_555 A N ALA 214 A ALA 211 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? 
covale ? covale7 B C ALA 3 B ALA 0 1_555 B N MSE 4 B MSE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale8 B C MSE 4 B MSE 1 1_555 B N GLU 5 B GLU 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? 
covale ? covale9 B C ILE 202 B ILE 199 1_555 B N MSE 203 B MSE 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale10 B C MSE 203 B MSE 200 1_555 B N ARG 204 B ARG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? 
covale ? covale11 B C LYS 212 B LYS 209 1_555 B N MSE 213 B MSE 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale12 B C MSE 213 B MSE 210 1_555 B N ALA 214 B ALA 211 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? 
#
_chem_comp.formula           'C10 H16 N5 O13 P3' 
_chem_comp.formula_weight    507.181 
_chem_comp.id                ATP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "ADENOSINE-5'-TRIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G ATP doub 70 n n 
PG O2G ATP sing 71 n n 
PG O3G ATP sing 72 n n 
PG O3B ATP sing 73 n n 
O2G HOG2 ATP sing 74 n n 
O3G HOG3 ATP sing 75 n n 
PB O1B ATP doub 76 n n 
PB O2B ATP sing 77 n n 
PB O3B ATP sing 78 n n 
PB O3A ATP sing 79 n n 
O2B HOB2 ATP sing 80 n n 
PA O1A ATP doub 81 n n 
PA O2A ATP sing 82 n n 
PA O3A ATP sing 83 n n 
PA O5' ATP sing 84 n n 
O2A HOA2 ATP sing 85 n n 
O5' C5' ATP sing 86 n n 
C5' C4' ATP sing 87 n n 
C5' "H5'1" ATP sing 88 n n 
C5' "H5'2" ATP sing 89 n n 
C4' O4' ATP sing 90 n n 
C4' C3' ATP sing 91 n n 
C4' H4' ATP sing 92 n n 
O4' C1' ATP sing 93 n n 
C3' O3' ATP sing 94 n n 
C3' C2' ATP sing 95 n n 
C3' H3' ATP sing 96 n n 
O3' HO3' ATP sing 97 n n 
C2' O2' ATP sing 98 n n 
C2' C1' ATP sing 99 n n 
C2' H2' ATP sing 100 n n 
O2' HO2' ATP sing 101 n n 
C1' N9 ATP sing 102 n n 
C1' H1' ATP sing 103 n n 
N9 C8 ATP sing 104 n y 
N9 C4 ATP sing 105 n y 
C8 N7 ATP doub 106 n y 
C8 H8 ATP sing 107 n n 
N7 C5 ATP sing 108 n y 
C5 C6 ATP sing 109 n y 
C5 C4 ATP doub 110 n y 
C6 N6 ATP sing 111 n n 
C6 N1 ATP doub 112 n y 
N6 HN61 ATP sing 113 n n 
N6 HN62 ATP sing 114 n n 
N1 C2 ATP sing 115 n y 
C2 N3 ATP doub 116 n y 
C2 H2 ATP sing 117 n n 
N3 C4 ATP sing 118 n y 
#
_atom_sites.entry_id                     3H1Q 
_atom_sites.fract_transf_matrix[1][1]    0.007757 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007757 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009531 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ATP A 1 301 301 ATP ATP . 
D 2 ATP B 1 301 301 ATP ATP . 
E 3 HOH A 1 401 3 HOH HOH . 
E 3 HOH A 2 402 5 HOH HOH . 
E 3 HOH A 3 403 6 HOH HOH . 
E 3 HOH A 4 404 8 HOH HOH . 
E 3 HOH A 5 405 10 HOH HOH . 
E 3 HOH A 6 406 11 HOH HOH . 
E 3 HOH A 7 407 12 HOH HOH . 
E 3 HOH A 8 408 18 HOH HOH . 
E 3 HOH A 9 409 19 HOH HOH . 
E 3 HOH A 10 410 20 HOH HOH . 
E 3 HOH A 11 411 29 HOH HOH . 
F 3 HOH B 1 401 1 HOH HOH . 
F 3 HOH B 2 402 2 HOH HOH . 
F 3 HOH B 3 403 4 HOH HOH . 
F 3 HOH B 4 404 7 HOH HOH . 
F 3 HOH B 5 405 9 HOH HOH . 
F 3 HOH B 6 406 13 HOH HOH . 
F 3 HOH B 7 407 14 HOH HOH . 
F 3 HOH B 8 408 15 HOH HOH . 
F 3 HOH B 9 409 17 HOH HOH . 
F 3 HOH B 10 410 21 HOH HOH . 
F 3 HOH B 11 411 22 HOH HOH . 
F 3 HOH B 12 412 23 HOH HOH . 
F 3 HOH B 13 413 24 HOH HOH . 
F 3 HOH B 14 414 25 HOH HOH . 
F 3 HOH B 15 415 26 HOH HOH . 
F 3 HOH B 16 416 27 HOH HOH . 
F 3 HOH B 17 417 28 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG ATP . . . D 2 88.585 28.404 40.75 1 65.46 ? PG ATP 301 B 1 
HETATM 2 O O1G ATP . . . D 2 89.753 29.337 41.078 1 62.78 ? O1G ATP 301 B 1 
HETATM 3 O O2G ATP . . . D 2 87.761 27.919 41.938 1 62.78 ? O2G ATP 301 B 1 
HETATM 4 O O3G ATP . . . D 2 87.75 28.984 39.616 1 65.14 ? O3G ATP 301 B 1 
HETATM 5 P PB ATP . . . D 2 89.214 26.084 38.907 1 52.41 ? PB ATP 301 B 1 
HETATM 6 O O1B ATP . . . D 2 90.297 25.079 38.917 1 51.01 ? O1B ATP 301 B 1 
HETATM 7 O O2B ATP . . . D 2 89.054 26.991 37.684 1 50.52 ? O2B ATP 301 B 1 
HETATM 8 O O3B ATP . . . D 2 89.31 26.995 40.263 1 60.03 ? O3B ATP 301 B 1 
HETATM 9 P PA ATP . . . D 2 86.558 25.163 38.443 1 47.88 ? PA ATP 301 B 1 
HETATM 10 O O1A ATP . . . D 2 86.797 25.639 37.042 1 45.35 ? O1A ATP 301 B 1 
HETATM 11 O O2A ATP . . . D 2 85.53 25.91 39.244 1 48.44 ? O2A ATP 301 B 1 
HETATM 12 O O3A ATP . . . D 2 87.958 25.132 39.274 1 50.63 ? O3A ATP 301 B 1 
HETATM 13 O O5' ATP . . . D 2 86.13 23.642 38.51 1 46.54 ? O5' ATP 301 B 1 
HETATM 14 C C5' ATP . . . D 2 86.524 22.683 37.555 1 49.85 ? C5' ATP 301 B 1 
HETATM 15 C C4' ATP . . . D 2 85.964 21.424 38.204 1 53.68 ? C4' ATP 301 B 1 
HETATM 16 O O4' ATP . . . D 2 84.544 21.331 37.975 1 54.48 ? O4' ATP 301 B 1 
HETATM 17 C C3' ATP . . . D 2 86.589 20.133 37.712 1 53.89 ? C3' ATP 301 B 1 
HETATM 18 O O3' ATP . . . D 2 86.55 19.218 38.825 1 54.99 ? O3' ATP 301 B 1 
HETATM 19 C C2' ATP . . . D 2 85.595 19.688 36.674 1 53.41 ? C2' ATP 301 B 1 
HETATM 20 O O2' ATP . . . D 2 85.613 18.282 36.441 1 54.42 ? O2' ATP 301 B 1 
HETATM 21 C C1' ATP . . . D 2 84.289 20.092 37.33 1 52.98 ? C1' ATP 301 B 1 
HETATM 22 N N9 ATP . . . D 2 83.295 20.197 36.264 1 52.38 ? N9 ATP 301 B 1 
HETATM 23 C C8 ATP . . . D 2 83.377 20.91 35.122 1 51.57 ? C8 ATP 301 B 1 
HETATM 24 N N7 ATP . . . D 2 82.271 20.728 34.366 1 50.54 ? N7 ATP 301 B 1 
HETATM 25 C C5 ATP . . . D 2 81.498 19.88 35.048 1 50.73 ? C5 ATP 301 B 1 
HETATM 26 C C6 ATP . . . D 2 80.217 19.251 34.845 1 50.64 ? C6 ATP 301 B 1 
HETATM 27 N N6 ATP . . . D 2 79.54 19.545 33.715 1 52.22 ? N6 ATP 301 B 1 
HETATM 28 N N1 ATP . . . D 2 79.797 18.445 35.84 1 48.12 ? N1 ATP 301 B 1 
HETATM 29 N N3 ATP . . . D 2 81.562 18.667 37.168 1 52.96 ? N3 ATP 301 B 1 
HETATM 30 C C4 ATP . . . D 2 82.159 19.522 36.292 1 52.34 ? C4 ATP 301 B 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    21 
_model_server_stats.query_time_ms           308 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           30 
#