data_3H1V # _model_server_result.job_id kemkTXUSJ_t1bwZ9cW2xjg _model_server_result.datetime_utc '2024-11-08 20:04:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3h1v # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":500}' # _entry.id 3H1V # _exptl.entry_id 3H1V _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 180.156 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description alpha-D-glucopyranose _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3H1V _cell.length_a 79.793 _cell.length_b 79.793 _cell.length_c 326.124 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3H1V _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H12 O6' _chem_comp.formula_weight 180.156 _chem_comp.id GLC _chem_comp.mon_nstd_flag . _chem_comp.name alpha-D-glucopyranose _chem_comp.type 'd-saccharide, alpha linking' _chem_comp.pdbx_synonyms alpha-D-glucose;D-glucose;glucose # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 GLC sing 83 n n C1 O1 GLC sing 84 n n C1 O5 GLC sing 85 n n C1 H1 GLC sing 86 n n C2 C3 GLC sing 87 n n C2 O2 GLC sing 88 n n C2 H2 GLC sing 89 n n C3 C4 GLC sing 90 n n C3 O3 GLC sing 91 n n C3 H3 GLC sing 92 n n C4 C5 GLC sing 93 n n C4 O4 GLC sing 94 n n C4 H4 GLC sing 95 n n C5 C6 GLC sing 96 n n C5 O5 GLC sing 97 n n C5 H5 GLC sing 98 n n C6 O6 GLC sing 99 n n C6 H61 GLC sing 100 n n C6 H62 GLC sing 101 n n O1 HO1 GLC sing 102 n n O2 HO2 GLC sing 103 n n O3 HO3 GLC sing 104 n n O4 HO4 GLC sing 105 n n O6 HO6 GLC sing 106 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version GLC DGlcpa 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 GLC a-D-glucopyranose 'COMMON NAME' GMML 1 GLC a-D-Glcp 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 GLC Glc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 3H1V _atom_sites.fract_transf_matrix[1][1] 0.012532 _atom_sites.fract_transf_matrix[1][2] 0.007236 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014471 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003066 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GLC X 1 500 500 GLC GLC . C 3 TK1 X 1 501 501 TK1 TK1 . D 4 NA X 1 600 600 NA NA1 . E 5 HOH X 1 601 601 HOH HOH . E 5 HOH X 2 602 602 HOH HOH . E 5 HOH X 3 603 603 HOH HOH . E 5 HOH X 4 604 604 HOH HOH . E 5 HOH X 5 605 605 HOH HOH . E 5 HOH X 6 606 606 HOH HOH . E 5 HOH X 7 607 607 HOH HOH . E 5 HOH X 8 608 608 HOH HOH . E 5 HOH X 9 610 610 HOH HOH . E 5 HOH X 10 611 611 HOH HOH . E 5 HOH X 11 612 612 HOH HOH . E 5 HOH X 12 613 613 HOH HOH . E 5 HOH X 13 614 614 HOH HOH . E 5 HOH X 14 615 615 HOH HOH . E 5 HOH X 15 616 616 HOH HOH . E 5 HOH X 16 617 617 HOH HOH . E 5 HOH X 17 618 618 HOH HOH . E 5 HOH X 18 619 619 HOH HOH . E 5 HOH X 19 620 620 HOH HOH . E 5 HOH X 20 621 621 HOH HOH . E 5 HOH X 21 622 622 HOH HOH . E 5 HOH X 22 623 623 HOH HOH . E 5 HOH X 23 624 624 HOH HOH . E 5 HOH X 24 625 625 HOH HOH . E 5 HOH X 25 626 626 HOH HOH . E 5 HOH X 26 627 627 HOH HOH . E 5 HOH X 27 628 628 HOH HOH . E 5 HOH X 28 629 629 HOH HOH . E 5 HOH X 29 630 630 HOH HOH . E 5 HOH X 30 631 631 HOH HOH . E 5 HOH X 31 632 632 HOH HOH . E 5 HOH X 32 633 633 HOH HOH . E 5 HOH X 33 634 634 HOH HOH . E 5 HOH X 34 635 635 HOH HOH . E 5 HOH X 35 636 636 HOH HOH . E 5 HOH X 36 637 637 HOH HOH . E 5 HOH X 37 638 638 HOH HOH . E 5 HOH X 38 639 639 HOH HOH . E 5 HOH X 39 640 640 HOH HOH . E 5 HOH X 40 642 642 HOH HOH . E 5 HOH X 41 643 643 HOH HOH . E 5 HOH X 42 644 644 HOH HOH . E 5 HOH X 43 645 645 HOH HOH . E 5 HOH X 44 646 646 HOH HOH . E 5 HOH X 45 647 647 HOH HOH . E 5 HOH X 46 648 648 HOH HOH . E 5 HOH X 47 649 649 HOH HOH . E 5 HOH X 48 650 650 HOH HOH . E 5 HOH X 49 651 651 HOH HOH . E 5 HOH X 50 652 652 HOH HOH . E 5 HOH X 51 653 653 HOH HOH . E 5 HOH X 52 654 654 HOH HOH . E 5 HOH X 53 656 656 HOH HOH . E 5 HOH X 54 657 657 HOH HOH . E 5 HOH X 55 659 659 HOH HOH . E 5 HOH X 56 660 660 HOH HOH . E 5 HOH X 57 661 661 HOH HOH . E 5 HOH X 58 662 662 HOH HOH . E 5 HOH X 59 663 663 HOH HOH . E 5 HOH X 60 664 664 HOH HOH . E 5 HOH X 61 665 665 HOH HOH . E 5 HOH X 62 666 666 HOH HOH . E 5 HOH X 63 667 667 HOH HOH . E 5 HOH X 64 668 668 HOH HOH . E 5 HOH X 65 670 670 HOH HOH . E 5 HOH X 66 672 672 HOH HOH . E 5 HOH X 67 673 673 HOH HOH . E 5 HOH X 68 674 674 HOH HOH . E 5 HOH X 69 675 675 HOH HOH . E 5 HOH X 70 678 678 HOH HOH . E 5 HOH X 71 681 681 HOH HOH . E 5 HOH X 72 682 682 HOH HOH . E 5 HOH X 73 683 683 HOH HOH . E 5 HOH X 74 684 684 HOH HOH . E 5 HOH X 75 689 689 HOH HOH . E 5 HOH X 76 690 690 HOH HOH . E 5 HOH X 77 691 691 HOH HOH . E 5 HOH X 78 696 696 HOH HOH . E 5 HOH X 79 703 703 HOH HOH . E 5 HOH X 80 705 705 HOH HOH . E 5 HOH X 81 706 706 HOH HOH . E 5 HOH X 82 707 707 HOH HOH . E 5 HOH X 83 715 715 HOH HOH . E 5 HOH X 84 717 717 HOH HOH . E 5 HOH X 85 718 718 HOH HOH . E 5 HOH X 86 719 719 HOH HOH . E 5 HOH X 87 721 721 HOH HOH . E 5 HOH X 88 722 722 HOH HOH . E 5 HOH X 89 723 723 HOH HOH . E 5 HOH X 90 724 724 HOH HOH . E 5 HOH X 91 725 725 HOH HOH . E 5 HOH X 92 726 726 HOH HOH . E 5 HOH X 93 727 727 HOH HOH . E 5 HOH X 94 728 728 HOH HOH . E 5 HOH X 95 729 729 HOH HOH . E 5 HOH X 96 730 730 HOH HOH . E 5 HOH X 97 731 731 HOH HOH . E 5 HOH X 98 732 732 HOH HOH . E 5 HOH X 99 733 733 HOH HOH . E 5 HOH X 100 734 734 HOH HOH . E 5 HOH X 101 735 735 HOH HOH . E 5 HOH X 102 736 736 HOH HOH . E 5 HOH X 103 737 737 HOH HOH . E 5 HOH X 104 738 738 HOH HOH . E 5 HOH X 105 739 739 HOH HOH . E 5 HOH X 106 740 740 HOH HOH . E 5 HOH X 107 741 741 HOH HOH . E 5 HOH X 108 742 742 HOH HOH . E 5 HOH X 109 744 744 HOH HOH . E 5 HOH X 110 746 746 HOH HOH . E 5 HOH X 111 747 747 HOH HOH . E 5 HOH X 112 749 749 HOH HOH . E 5 HOH X 113 751 751 HOH HOH . E 5 HOH X 114 752 752 HOH HOH . E 5 HOH X 115 753 753 HOH HOH . E 5 HOH X 116 754 754 HOH HOH . E 5 HOH X 117 755 755 HOH HOH . E 5 HOH X 118 756 756 HOH HOH . E 5 HOH X 119 761 761 HOH HOH . E 5 HOH X 120 765 765 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GLC . . . B 2 22.793 3.612 66.942 1 23.73 ? C1 GLC 500 X 1 HETATM 2 C C2 GLC . . . B 2 22.7 4.896 66.112 1 20.13 ? C2 GLC 500 X 1 HETATM 3 C C3 GLC . . . B 2 24.098 5.463 65.865 1 19.23 ? C3 GLC 500 X 1 HETATM 4 C C4 GLC . . . B 2 24.798 5.62 67.172 1 24.01 ? C4 GLC 500 X 1 HETATM 5 C C5 GLC . . . B 2 24.773 4.312 67.985 1 22.97 ? C5 GLC 500 X 1 HETATM 6 C C6 GLC . . . B 2 25.534 4.361 69.309 1 14.45 ? C6 GLC 500 X 1 HETATM 7 O O1 GLC . . . B 2 23.647 2.673 66.229 1 27.66 ? O1 GLC 500 X 1 HETATM 8 O O2 GLC . . . B 2 21.971 4.612 64.884 1 19.33 ? O2 GLC 500 X 1 HETATM 9 O O3 GLC . . . B 2 24.145 6.8 65.244 1 21.33 ? O3 GLC 500 X 1 HETATM 10 O O4 GLC . . . B 2 26.143 5.975 66.844 1 26.91 ? O4 GLC 500 X 1 HETATM 11 O O5 GLC . . . B 2 23.425 3.941 68.177 1 24.54 ? O5 GLC 500 X 1 HETATM 12 O O6 GLC . . . B 2 24.946 5.347 70.22 1 21.84 ? O6 GLC 500 X 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 239 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 12 #