data_3H22 # _model_server_result.job_id UdnhLj4M22rWDFfjSWEhkA _model_server_result.datetime_utc '2024-11-24 11:04:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3h22 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":901}' # _entry.id 3H22 # _exptl.entry_id 3H22 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 155.115 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2,6-diamino-5-nitrosopyrimidin-4(3H)-one _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3H22 _cell.length_a 98.769 _cell.length_b 98.769 _cell.length_c 263.942 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3H22 _symmetry.cell_setting ? _symmetry.Int_Tables_number 180 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 62 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,L 1 1,2 B,H,I,J,K,M 2 1,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_475 -x-1,-y+2,z -1 0 0 0 -1 0 0 0 1 -197.538 171.072926 0 3 'crystal symmetry operation' 4_465 -x-1,-y+1,z -1 0 0 0 -1 0 0 0 1 -148.1535 85.536463 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 H N N # _chem_comp.formula 'C4 H5 N5 O2' _chem_comp.formula_weight 155.115 _chem_comp.id B53 _chem_comp.mon_nstd_flag . _chem_comp.name 2,6-diamino-5-nitrosopyrimidin-4(3H)-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O10 N9 B53 doub 70 n n N9 C4 B53 sing 71 n n C4 C1 B53 sing 72 n n C4 C7 B53 doub 73 n n C1 O2 B53 doub 74 n n C1 N3 B53 sing 75 n n C7 N12 B53 sing 76 n n C7 N6 B53 sing 77 n n N12 HN12 B53 sing 78 n n N12 HN1A B53 sing 79 n n N6 C5 B53 doub 80 n n C5 N8 B53 sing 81 n n C5 N3 B53 sing 82 n n N8 HN8 B53 sing 83 n n N8 HN8A B53 sing 84 n n N3 H5 B53 sing 85 n n # _atom_sites.entry_id 3H22 _atom_sites.fract_transf_matrix[1][1] 0.010125 _atom_sites.fract_transf_matrix[1][2] 0.005845 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011691 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003789 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 B53 A 1 901 901 B53 B53 . D 3 SO4 A 1 278 1 SO4 SO4 . E 3 SO4 A 1 279 2 SO4 SO4 . F 3 SO4 A 1 280 6 SO4 SO4 . G 3 SO4 A 1 281 7 SO4 SO4 . H 2 B53 B 1 902 902 B53 B53 . I 3 SO4 B 1 278 3 SO4 SO4 . J 3 SO4 B 1 279 4 SO4 SO4 . K 3 SO4 B 1 280 5 SO4 SO4 . L 4 HOH A 1 282 1 HOH HOH . L 4 HOH A 2 283 2 HOH HOH . L 4 HOH A 3 284 3 HOH HOH . L 4 HOH A 4 285 4 HOH HOH . L 4 HOH A 5 286 5 HOH HOH . L 4 HOH A 6 287 6 HOH HOH . L 4 HOH A 7 288 7 HOH HOH . L 4 HOH A 8 289 8 HOH HOH . L 4 HOH A 9 290 9 HOH HOH . L 4 HOH A 10 291 10 HOH HOH . L 4 HOH A 11 292 11 HOH HOH . L 4 HOH A 12 293 12 HOH HOH . L 4 HOH A 13 294 13 HOH HOH . L 4 HOH A 14 295 14 HOH HOH . L 4 HOH A 15 296 15 HOH HOH . L 4 HOH A 16 297 16 HOH HOH . L 4 HOH A 17 298 17 HOH HOH . L 4 HOH A 18 299 18 HOH HOH . L 4 HOH A 19 300 19 HOH HOH . L 4 HOH A 20 301 20 HOH HOH . L 4 HOH A 21 302 21 HOH HOH . L 4 HOH A 22 303 22 HOH HOH . L 4 HOH A 23 304 23 HOH HOH . L 4 HOH A 24 305 24 HOH HOH . L 4 HOH A 25 306 25 HOH HOH . L 4 HOH A 26 307 26 HOH HOH . L 4 HOH A 27 308 27 HOH HOH . L 4 HOH A 28 309 49 HOH HOH . L 4 HOH A 29 310 50 HOH HOH . L 4 HOH A 30 311 51 HOH HOH . L 4 HOH A 31 312 52 HOH HOH . L 4 HOH A 32 313 53 HOH HOH . L 4 HOH A 33 314 54 HOH HOH . L 4 HOH A 34 315 55 HOH HOH . L 4 HOH A 35 316 56 HOH HOH . L 4 HOH A 36 317 57 HOH HOH . L 4 HOH A 37 318 58 HOH HOH . L 4 HOH A 38 319 60 HOH HOH . L 4 HOH A 39 320 61 HOH HOH . L 4 HOH A 40 321 62 HOH HOH . L 4 HOH A 41 322 63 HOH HOH . L 4 HOH A 42 323 69 HOH HOH . L 4 HOH A 43 324 74 HOH HOH . L 4 HOH A 44 325 77 HOH HOH . M 4 HOH B 1 281 28 HOH HOH . M 4 HOH B 2 282 29 HOH HOH . M 4 HOH B 3 283 30 HOH HOH . M 4 HOH B 4 284 31 HOH HOH . M 4 HOH B 5 285 32 HOH HOH . M 4 HOH B 6 286 33 HOH HOH . M 4 HOH B 7 287 34 HOH HOH . M 4 HOH B 8 288 35 HOH HOH . M 4 HOH B 9 289 36 HOH HOH . M 4 HOH B 10 290 37 HOH HOH . M 4 HOH B 11 291 38 HOH HOH . M 4 HOH B 12 292 39 HOH HOH . M 4 HOH B 13 293 40 HOH HOH . M 4 HOH B 14 294 41 HOH HOH . M 4 HOH B 15 295 42 HOH HOH . M 4 HOH B 16 296 43 HOH HOH . M 4 HOH B 17 297 44 HOH HOH . M 4 HOH B 18 298 45 HOH HOH . M 4 HOH B 19 299 46 HOH HOH . M 4 HOH B 20 300 47 HOH HOH . M 4 HOH B 21 301 48 HOH HOH . M 4 HOH B 22 302 59 HOH HOH . M 4 HOH B 23 303 64 HOH HOH . M 4 HOH B 24 304 65 HOH HOH . M 4 HOH B 25 305 66 HOH HOH . M 4 HOH B 26 306 67 HOH HOH . M 4 HOH B 27 307 68 HOH HOH . M 4 HOH B 28 308 70 HOH HOH . M 4 HOH B 29 309 71 HOH HOH . M 4 HOH B 30 310 72 HOH HOH . M 4 HOH B 31 311 73 HOH HOH . M 4 HOH B 32 312 75 HOH HOH . M 4 HOH B 33 313 76 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O10 B53 . . . C 2 -80.024 87.79 94.379 1 58.16 ? O10 B53 901 A 1 HETATM 2 N N9 B53 . . . C 2 -78.971 87.209 94.14 1 57.64 ? N9 B53 901 A 1 HETATM 3 C C4 B53 . . . C 2 -78.88 86.168 93.215 1 56.74 ? C4 B53 901 A 1 HETATM 4 C C1 B53 . . . C 2 -79.808 86.004 92.071 1 57.01 ? C1 B53 901 A 1 HETATM 5 O O2 B53 . . . C 2 -80.781 86.753 91.875 1 57.43 ? O2 B53 901 A 1 HETATM 6 C C7 B53 . . . C 2 -77.783 85.172 93.329 1 59.23 ? C7 B53 901 A 1 HETATM 7 N N12 B53 . . . C 2 -76.87 85.289 94.316 1 57.74 ? N12 B53 901 A 1 HETATM 8 N N6 B53 . . . C 2 -77.695 84.166 92.414 1 58.71 ? N6 B53 901 A 1 HETATM 9 C C5 B53 . . . C 2 -78.597 84.087 91.397 1 57.69 ? C5 B53 901 A 1 HETATM 10 N N8 B53 . . . C 2 -78.51 83.095 90.5 1 56.7 ? N8 B53 901 A 1 HETATM 11 N N3 B53 . . . C 2 -79.618 84.96 91.247 1 59.88 ? N3 B53 901 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 452 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 11 #