data_3H22
#
_model_server_result.job_id            28D53e4ciQW5-UG4AC5Osw 
_model_server_result.datetime_utc      '2024-10-19 13:31:36' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3h22 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":902}' 
#
_entry.id    3H22 
#
_exptl.entry_id    3H22 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              155.115 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2,6-diamino-5-nitrosopyrimidin-4(3H)-one 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3H22 
_cell.length_a            98.769 
_cell.length_b            98.769 
_cell.length_c            263.942 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3H22 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        180 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 62 2 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,L 1 1,2 
B,H,I,J,K,M 2 1,3 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 4_475 -x-1,-y+2,z -1 0 0 0 -1 0 0 0 1 -197.538 171.072926 0 
3 'crystal symmetry operation' 4_465 -x-1,-y+1,z -1 0 0 0 -1 0 0 0 1 -148.1535 85.536463 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 H N N 
#
_chem_comp.formula           'C4 H5 N5 O2' 
_chem_comp.formula_weight    155.115 
_chem_comp.id                B53 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2,6-diamino-5-nitrosopyrimidin-4(3H)-one 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O10 N9 B53 doub 70 n n 
N9 C4 B53 sing 71 n n 
C4 C1 B53 sing 72 n n 
C4 C7 B53 doub 73 n n 
C1 O2 B53 doub 74 n n 
C1 N3 B53 sing 75 n n 
C7 N12 B53 sing 76 n n 
C7 N6 B53 sing 77 n n 
N12 HN12 B53 sing 78 n n 
N12 HN1A B53 sing 79 n n 
N6 C5 B53 doub 80 n n 
C5 N8 B53 sing 81 n n 
C5 N3 B53 sing 82 n n 
N8 HN8 B53 sing 83 n n 
N8 HN8A B53 sing 84 n n 
N3 H5 B53 sing 85 n n 
#
_atom_sites.entry_id                     3H22 
_atom_sites.fract_transf_matrix[1][1]    0.010125 
_atom_sites.fract_transf_matrix[1][2]    0.005845 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011691 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003789 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 B53 A 1 901 901 B53 B53 . 
D 3 SO4 A 1 278 1 SO4 SO4 . 
E 3 SO4 A 1 279 2 SO4 SO4 . 
F 3 SO4 A 1 280 6 SO4 SO4 . 
G 3 SO4 A 1 281 7 SO4 SO4 . 
H 2 B53 B 1 902 902 B53 B53 . 
I 3 SO4 B 1 278 3 SO4 SO4 . 
J 3 SO4 B 1 279 4 SO4 SO4 . 
K 3 SO4 B 1 280 5 SO4 SO4 . 
L 4 HOH A 1 282 1 HOH HOH . 
L 4 HOH A 2 283 2 HOH HOH . 
L 4 HOH A 3 284 3 HOH HOH . 
L 4 HOH A 4 285 4 HOH HOH . 
L 4 HOH A 5 286 5 HOH HOH . 
L 4 HOH A 6 287 6 HOH HOH . 
L 4 HOH A 7 288 7 HOH HOH . 
L 4 HOH A 8 289 8 HOH HOH . 
L 4 HOH A 9 290 9 HOH HOH . 
L 4 HOH A 10 291 10 HOH HOH . 
L 4 HOH A 11 292 11 HOH HOH . 
L 4 HOH A 12 293 12 HOH HOH . 
L 4 HOH A 13 294 13 HOH HOH . 
L 4 HOH A 14 295 14 HOH HOH . 
L 4 HOH A 15 296 15 HOH HOH . 
L 4 HOH A 16 297 16 HOH HOH . 
L 4 HOH A 17 298 17 HOH HOH . 
L 4 HOH A 18 299 18 HOH HOH . 
L 4 HOH A 19 300 19 HOH HOH . 
L 4 HOH A 20 301 20 HOH HOH . 
L 4 HOH A 21 302 21 HOH HOH . 
L 4 HOH A 22 303 22 HOH HOH . 
L 4 HOH A 23 304 23 HOH HOH . 
L 4 HOH A 24 305 24 HOH HOH . 
L 4 HOH A 25 306 25 HOH HOH . 
L 4 HOH A 26 307 26 HOH HOH . 
L 4 HOH A 27 308 27 HOH HOH . 
L 4 HOH A 28 309 49 HOH HOH . 
L 4 HOH A 29 310 50 HOH HOH . 
L 4 HOH A 30 311 51 HOH HOH . 
L 4 HOH A 31 312 52 HOH HOH . 
L 4 HOH A 32 313 53 HOH HOH . 
L 4 HOH A 33 314 54 HOH HOH . 
L 4 HOH A 34 315 55 HOH HOH . 
L 4 HOH A 35 316 56 HOH HOH . 
L 4 HOH A 36 317 57 HOH HOH . 
L 4 HOH A 37 318 58 HOH HOH . 
L 4 HOH A 38 319 60 HOH HOH . 
L 4 HOH A 39 320 61 HOH HOH . 
L 4 HOH A 40 321 62 HOH HOH . 
L 4 HOH A 41 322 63 HOH HOH . 
L 4 HOH A 42 323 69 HOH HOH . 
L 4 HOH A 43 324 74 HOH HOH . 
L 4 HOH A 44 325 77 HOH HOH . 
M 4 HOH B 1 281 28 HOH HOH . 
M 4 HOH B 2 282 29 HOH HOH . 
M 4 HOH B 3 283 30 HOH HOH . 
M 4 HOH B 4 284 31 HOH HOH . 
M 4 HOH B 5 285 32 HOH HOH . 
M 4 HOH B 6 286 33 HOH HOH . 
M 4 HOH B 7 287 34 HOH HOH . 
M 4 HOH B 8 288 35 HOH HOH . 
M 4 HOH B 9 289 36 HOH HOH . 
M 4 HOH B 10 290 37 HOH HOH . 
M 4 HOH B 11 291 38 HOH HOH . 
M 4 HOH B 12 292 39 HOH HOH . 
M 4 HOH B 13 293 40 HOH HOH . 
M 4 HOH B 14 294 41 HOH HOH . 
M 4 HOH B 15 295 42 HOH HOH . 
M 4 HOH B 16 296 43 HOH HOH . 
M 4 HOH B 17 297 44 HOH HOH . 
M 4 HOH B 18 298 45 HOH HOH . 
M 4 HOH B 19 299 46 HOH HOH . 
M 4 HOH B 20 300 47 HOH HOH . 
M 4 HOH B 21 301 48 HOH HOH . 
M 4 HOH B 22 302 59 HOH HOH . 
M 4 HOH B 23 303 64 HOH HOH . 
M 4 HOH B 24 304 65 HOH HOH . 
M 4 HOH B 25 305 66 HOH HOH . 
M 4 HOH B 26 306 67 HOH HOH . 
M 4 HOH B 27 307 68 HOH HOH . 
M 4 HOH B 28 308 70 HOH HOH . 
M 4 HOH B 29 309 71 HOH HOH . 
M 4 HOH B 30 310 72 HOH HOH . 
M 4 HOH B 31 311 73 HOH HOH . 
M 4 HOH B 32 312 75 HOH HOH . 
M 4 HOH B 33 313 76 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O10 B53 . . . H 2 -62.763 58.09 137.078 1 57.94 ? O10 B53 902 B 1 
HETATM 2 N N9 B53 . . . H 2 -63.022 59.27 136.967 1 53.22 ? N9 B53 902 B 1 
HETATM 3 C C4 B53 . . . H 2 -63.807 59.857 137.929 1 53.23 ? C4 B53 902 B 1 
HETATM 4 C C1 B53 . . . H 2 -64.42 59.089 139.028 1 53.58 ? C1 B53 902 B 1 
HETATM 5 O O2 B53 . . . H 2 -64.248 57.833 139.134 1 50.55 ? O2 B53 902 B 1 
HETATM 6 C C7 B53 . . . H 2 -64.05 61.309 137.886 1 54.06 ? C7 B53 902 B 1 
HETATM 7 N N12 B53 . . . H 2 -63.493 62.041 136.895 1 52.1 ? N12 B53 902 B 1 
HETATM 8 N N6 B53 . . . H 2 -64.834 61.873 138.845 1 53.68 ? N6 B53 902 B 1 
HETATM 9 C C5 B53 . . . H 2 -65.39 61.123 139.828 1 52.41 ? C5 B53 902 B 1 
HETATM 10 N N8 B53 . . . H 2 -66.163 61.723 140.765 1 50.92 ? N8 B53 902 B 1 
HETATM 11 N N3 B53 . . . H 2 -65.194 59.801 139.877 1 52.17 ? N3 B53 902 B 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           343 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           11 
#