data_3H26 # _model_server_result.job_id YDbdtS2NqfMQelepzD-kxQ _model_server_result.datetime_utc '2024-11-26 04:26:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3h26 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":902}' # _entry.id 3H26 # _exptl.entry_id 3H26 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 223.189 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-amino-8-methyl-4-oxo-3,4,7,8-tetrahydropteridine-6-carboxylic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3H26 _cell.length_a 97.899 _cell.length_b 97.899 _cell.length_c 262.88 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3H26 _symmetry.cell_setting ? _symmetry.Int_Tables_number 180 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 62 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,K 1 1,2 B,G,H,I,J,L 2 1,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_475 -x-1,-y+2,z -1 0 0 0 -1 0 0 0 1 -195.798 169.566042 0 3 'crystal symmetry operation' 4_465 -x-1,-y+1,z -1 0 0 0 -1 0 0 0 1 -146.8485 84.783021 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 G N N # _chem_comp.formula 'C8 H9 N5 O3' _chem_comp.formula_weight 223.189 _chem_comp.id B56 _chem_comp.mon_nstd_flag . _chem_comp.name '2-amino-8-methyl-4-oxo-3,4,7,8-tetrahydropteridine-6-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O9 C8 B56 doub 70 n n C8 C10 B56 sing 71 n n N7 C8 B56 sing 72 n n N7 C5 B56 sing 73 n n N7 HN7 B56 sing 74 n n C5 N4 B56 doub 75 n n N6 C5 B56 sing 76 n n N6 HN6 B56 sing 77 n n N6 HN6A B56 sing 78 n n N4 C3 B56 sing 79 n n C10 C3 B56 doub 80 n n C10 N11 B56 sing 81 n n C3 N1 B56 sing 82 n n N1 C2 B56 sing 83 n n N1 C16 B56 sing 84 n n C2 H2 B56 sing 85 n n C2 H2A B56 sing 86 n n C2 H2B B56 sing 87 n n C16 H16 B56 sing 88 n n N11 C12 B56 doub 89 n n C12 C16 B56 sing 90 n n C12 C13 B56 sing 91 n n C13 O14 B56 sing 92 n n O15 C13 B56 doub 93 n n O14 HO14 B56 sing 94 n n C16 H9 B56 sing 95 n n # _atom_sites.entry_id 3H26 _atom_sites.fract_transf_matrix[1][1] 0.010215 _atom_sites.fract_transf_matrix[1][2] 0.005897 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011795 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003804 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 B56 A 1 901 901 B56 B56 . D 3 SO4 A 1 278 1 SO4 SO4 . E 3 SO4 A 1 279 4 SO4 SO4 . F 3 SO4 A 1 280 5 SO4 SO4 . G 2 B56 B 1 902 902 B56 B56 . H 3 SO4 B 1 278 2 SO4 SO4 . I 3 SO4 B 1 279 3 SO4 SO4 . J 3 SO4 B 1 280 6 SO4 SO4 . K 4 HOH A 1 281 1 HOH HOH . K 4 HOH A 2 282 2 HOH HOH . K 4 HOH A 3 283 3 HOH HOH . K 4 HOH A 4 284 4 HOH HOH . K 4 HOH A 5 285 5 HOH HOH . K 4 HOH A 6 286 6 HOH HOH . K 4 HOH A 7 287 7 HOH HOH . K 4 HOH A 8 288 8 HOH HOH . K 4 HOH A 9 289 9 HOH HOH . K 4 HOH A 10 290 10 HOH HOH . K 4 HOH A 11 291 11 HOH HOH . K 4 HOH A 12 292 12 HOH HOH . K 4 HOH A 13 293 13 HOH HOH . K 4 HOH A 14 294 14 HOH HOH . K 4 HOH A 15 295 15 HOH HOH . K 4 HOH A 16 296 16 HOH HOH . K 4 HOH A 17 297 28 HOH HOH . K 4 HOH A 18 298 29 HOH HOH . K 4 HOH A 19 299 30 HOH HOH . K 4 HOH A 20 300 34 HOH HOH . K 4 HOH A 21 301 36 HOH HOH . K 4 HOH A 22 302 37 HOH HOH . K 4 HOH A 23 303 39 HOH HOH . K 4 HOH A 24 304 40 HOH HOH . K 4 HOH A 25 305 41 HOH HOH . K 4 HOH A 26 306 42 HOH HOH . K 4 HOH A 27 307 43 HOH HOH . K 4 HOH A 28 308 44 HOH HOH . K 4 HOH A 29 309 45 HOH HOH . K 4 HOH A 30 310 46 HOH HOH . K 4 HOH A 31 311 47 HOH HOH . K 4 HOH A 32 312 48 HOH HOH . K 4 HOH A 33 313 58 HOH HOH . K 4 HOH A 34 314 59 HOH HOH . K 4 HOH A 35 315 62 HOH HOH . K 4 HOH A 36 316 63 HOH HOH . K 4 HOH A 37 317 64 HOH HOH . K 4 HOH A 38 318 65 HOH HOH . K 4 HOH A 39 319 66 HOH HOH . K 4 HOH A 40 320 67 HOH HOH . K 4 HOH A 41 321 69 HOH HOH . K 4 HOH A 42 322 70 HOH HOH . K 4 HOH A 43 323 71 HOH HOH . K 4 HOH A 44 324 72 HOH HOH . K 4 HOH A 45 325 73 HOH HOH . K 4 HOH A 46 326 74 HOH HOH . K 4 HOH A 47 327 80 HOH HOH . K 4 HOH A 48 328 81 HOH HOH . K 4 HOH A 49 329 82 HOH HOH . K 4 HOH A 50 330 83 HOH HOH . K 4 HOH A 51 331 84 HOH HOH . K 4 HOH A 52 332 86 HOH HOH . K 4 HOH A 53 333 87 HOH HOH . K 4 HOH A 54 334 88 HOH HOH . K 4 HOH A 55 335 89 HOH HOH . K 4 HOH A 56 336 90 HOH HOH . K 4 HOH A 57 337 94 HOH HOH . K 4 HOH A 58 338 61 HOH HOH . L 4 HOH B 1 281 17 HOH HOH . L 4 HOH B 2 282 18 HOH HOH . L 4 HOH B 3 283 19 HOH HOH . L 4 HOH B 4 284 20 HOH HOH . L 4 HOH B 5 285 21 HOH HOH . L 4 HOH B 6 286 22 HOH HOH . L 4 HOH B 7 287 23 HOH HOH . L 4 HOH B 8 288 24 HOH HOH . L 4 HOH B 9 289 25 HOH HOH . L 4 HOH B 10 290 26 HOH HOH . L 4 HOH B 11 291 27 HOH HOH . L 4 HOH B 12 292 31 HOH HOH . L 4 HOH B 13 293 32 HOH HOH . L 4 HOH B 14 294 33 HOH HOH . L 4 HOH B 15 295 35 HOH HOH . L 4 HOH B 16 296 38 HOH HOH . L 4 HOH B 17 297 49 HOH HOH . L 4 HOH B 18 298 50 HOH HOH . L 4 HOH B 19 299 51 HOH HOH . L 4 HOH B 20 300 52 HOH HOH . L 4 HOH B 21 301 53 HOH HOH . L 4 HOH B 22 302 54 HOH HOH . L 4 HOH B 23 303 55 HOH HOH . L 4 HOH B 24 304 56 HOH HOH . L 4 HOH B 25 305 57 HOH HOH . L 4 HOH B 26 306 60 HOH HOH . L 4 HOH B 27 308 68 HOH HOH . L 4 HOH B 28 309 75 HOH HOH . L 4 HOH B 29 310 76 HOH HOH . L 4 HOH B 30 311 77 HOH HOH . L 4 HOH B 31 312 78 HOH HOH . L 4 HOH B 32 313 79 HOH HOH . L 4 HOH B 33 314 85 HOH HOH . L 4 HOH B 34 315 91 HOH HOH . L 4 HOH B 35 316 92 HOH HOH . L 4 HOH B 36 317 93 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O9 B56 . . . G 2 -63.315 57.16 139.055 1 48.31 ? O9 B56 902 B 1 HETATM 2 C C8 B56 . . . G 2 -63.533 58.333 138.69 1 48.32 ? C8 B56 902 B 1 HETATM 3 N N7 B56 . . . G 2 -64.39 59.1 139.399 1 48.45 ? N7 B56 902 B 1 HETATM 4 C C5 B56 . . . G 2 -64.646 60.377 139.032 1 48.46 ? C5 B56 902 B 1 HETATM 5 N N6 B56 . . . G 2 -65.512 61.116 139.768 1 48.41 ? N6 B56 902 B 1 HETATM 6 N N4 B56 . . . G 2 -64.045 60.909 137.939 1 48.42 ? N4 B56 902 B 1 HETATM 7 C C10 B56 . . . G 2 -62.904 58.859 137.564 1 48.38 ? C10 B56 902 B 1 HETATM 8 C C3 B56 . . . G 2 -63.177 60.175 137.194 1 48.43 ? C3 B56 902 B 1 HETATM 9 N N1 B56 . . . G 2 -62.574 60.694 136.108 1 48.5 ? N1 B56 902 B 1 HETATM 10 C C2 B56 . . . G 2 -62.851 62.07 135.704 1 48.44 ? C2 B56 902 B 1 HETATM 11 C C16 B56 . . . G 2 -61.717 59.967 135.374 1 48.3 ? C16 B56 902 B 1 HETATM 12 N N11 B56 . . . G 2 -62.038 58.116 136.829 1 48.42 ? N11 B56 902 B 1 HETATM 13 C C12 B56 . . . G 2 -61.435 58.649 135.734 1 48.43 ? C12 B56 902 B 1 HETATM 14 C C13 B56 . . . G 2 -60.471 57.835 134.912 1 48.46 ? C13 B56 902 B 1 HETATM 15 O O15 B56 . . . G 2 -60.216 56.655 135.236 1 48.55 ? O15 B56 902 B 1 HETATM 16 O O14 B56 . . . G 2 -59.934 58.354 133.909 1 48.6 ? O14 B56 902 B 1 # _model_server_stats.io_time_ms 53 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 16 #