data_3H2N
#
_model_server_result.job_id            '_ulCGi_BEYA7lR1P9Fyz9Q' 
_model_server_result.datetime_utc      '2024-11-28 22:27:19' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3h2n 
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_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":901}' 
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_entry.id    3H2N 
#
_exptl.entry_id    3H2N 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              181.195 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (6R)-2-amino-6-methyl-5,6,7,8-tetrahydropteridin-4(3H)-one 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3H2N 
_cell.length_a            98.314 
_cell.length_b            98.314 
_cell.length_c            263.122 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
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_symmetry.entry_id                 3H2N 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        180 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 62 2 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
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loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,M 1 1,2 
B,H,I,J,K,L,N 2 1,3 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 4_475 -x-1,-y+2,z -1 0 0 0 -1 0 0 0 1 -196.628 170.284843 0 
3 'crystal symmetry operation' 4_465 -x-1,-y+1,z -1 0 0 0 -1 0 0 0 1 -147.471 85.142422 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 H N N 
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_chem_comp.formula           'C7 H11 N5 O' 
_chem_comp.formula_weight    181.195 
_chem_comp.id                B62 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (6R)-2-amino-6-methyl-5,6,7,8-tetrahydropteridin-4(3H)-one 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O12 C1 B62 doub 70 n n 
C1 N2 B62 sing 71 n n 
C1 C6 B62 sing 72 n n 
N2 C3 B62 sing 73 n n 
C6 N7 B62 sing 74 n n 
C6 C5 B62 doub 75 n n 
N7 C8 B62 sing 76 n n 
C8 C11 B62 sing 77 n n 
C8 C9 B62 sing 78 n n 
C9 N10 B62 sing 79 n n 
N10 C5 B62 sing 80 n n 
C5 N4 B62 sing 81 n n 
N4 C3 B62 doub 82 n n 
C3 N13 B62 sing 83 n n 
N2 HN2 B62 sing 84 n n 
N7 HN7 B62 sing 85 n n 
C8 H8 B62 sing 86 n n 
C11 H11 B62 sing 87 n n 
C11 H11A B62 sing 88 n n 
C11 H11B B62 sing 89 n n 
C9 H9 B62 sing 90 n n 
C9 H9A B62 sing 91 n n 
N10 HN10 B62 sing 92 n n 
N13 HN13 B62 sing 93 n n 
N13 HN1A B62 sing 94 n n 
#
_atom_sites.entry_id                     3H2N 
_atom_sites.fract_transf_matrix[1][1]    0.010171 
_atom_sites.fract_transf_matrix[1][2]    0.005873 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011745 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003801 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 B62 A 1 901 901 B62 B62 . 
D 3 SO4 A 1 301 301 SO4 SO4 . 
E 3 SO4 A 1 303 303 SO4 SO4 . 
F 3 SO4 A 1 305 305 SO4 SO4 . 
G 3 SO4 A 1 306 306 SO4 SO4 . 
H 2 B62 B 1 902 902 B62 B62 . 
I 3 SO4 B 1 302 302 SO4 SO4 . 
J 3 SO4 B 1 304 304 SO4 SO4 . 
K 3 SO4 B 1 307 307 SO4 SO4 . 
L 3 SO4 B 1 308 308 SO4 SO4 . 
M 4 HOH A 1 278 1 HOH HOH . 
M 4 HOH A 2 279 2 HOH HOH . 
M 4 HOH A 3 280 3 HOH HOH . 
M 4 HOH A 4 281 4 HOH HOH . 
M 4 HOH A 5 282 5 HOH HOH . 
M 4 HOH A 6 283 6 HOH HOH . 
M 4 HOH A 7 284 7 HOH HOH . 
M 4 HOH A 8 285 8 HOH HOH . 
M 4 HOH A 9 287 11 HOH HOH . 
M 4 HOH A 10 288 12 HOH HOH . 
M 4 HOH A 11 289 13 HOH HOH . 
M 4 HOH A 12 290 14 HOH HOH . 
M 4 HOH A 13 291 15 HOH HOH . 
M 4 HOH A 14 292 16 HOH HOH . 
M 4 HOH A 15 293 17 HOH HOH . 
M 4 HOH A 16 294 18 HOH HOH . 
M 4 HOH A 17 295 19 HOH HOH . 
M 4 HOH A 18 296 20 HOH HOH . 
M 4 HOH A 19 297 21 HOH HOH . 
M 4 HOH A 20 298 22 HOH HOH . 
M 4 HOH A 21 299 23 HOH HOH . 
M 4 HOH A 22 300 24 HOH HOH . 
M 4 HOH A 23 302 47 HOH HOH . 
M 4 HOH A 24 304 50 HOH HOH . 
M 4 HOH A 25 307 51 HOH HOH . 
M 4 HOH A 26 308 52 HOH HOH . 
M 4 HOH A 27 309 57 HOH HOH . 
M 4 HOH A 28 310 58 HOH HOH . 
M 4 HOH A 29 311 59 HOH HOH . 
M 4 HOH A 30 312 60 HOH HOH . 
M 4 HOH A 31 313 66 HOH HOH . 
N 4 HOH B 1 278 9 HOH HOH . 
N 4 HOH B 2 279 25 HOH HOH . 
N 4 HOH B 3 280 26 HOH HOH . 
N 4 HOH B 4 281 27 HOH HOH . 
N 4 HOH B 5 282 28 HOH HOH . 
N 4 HOH B 6 283 29 HOH HOH . 
N 4 HOH B 7 284 30 HOH HOH . 
N 4 HOH B 8 285 31 HOH HOH . 
N 4 HOH B 9 286 10 HOH HOH . 
N 4 HOH B 10 287 33 HOH HOH . 
N 4 HOH B 11 288 34 HOH HOH . 
N 4 HOH B 12 289 35 HOH HOH . 
N 4 HOH B 13 290 36 HOH HOH . 
N 4 HOH B 14 291 37 HOH HOH . 
N 4 HOH B 15 292 38 HOH HOH . 
N 4 HOH B 16 293 39 HOH HOH . 
N 4 HOH B 17 294 40 HOH HOH . 
N 4 HOH B 18 295 41 HOH HOH . 
N 4 HOH B 19 296 42 HOH HOH . 
N 4 HOH B 20 297 43 HOH HOH . 
N 4 HOH B 21 298 44 HOH HOH . 
N 4 HOH B 22 299 45 HOH HOH . 
N 4 HOH B 23 300 46 HOH HOH . 
N 4 HOH B 24 301 48 HOH HOH . 
N 4 HOH B 25 303 49 HOH HOH . 
N 4 HOH B 26 305 53 HOH HOH . 
N 4 HOH B 27 306 54 HOH HOH . 
N 4 HOH B 28 309 55 HOH HOH . 
N 4 HOH B 29 310 56 HOH HOH . 
N 4 HOH B 30 311 61 HOH HOH . 
N 4 HOH B 31 312 62 HOH HOH . 
N 4 HOH B 32 313 63 HOH HOH . 
N 4 HOH B 33 314 64 HOH HOH . 
N 4 HOH B 34 315 65 HOH HOH . 
N 4 HOH B 35 316 67 HOH HOH . 
N 4 HOH B 36 317 68 HOH HOH . 
N 4 HOH B 37 318 69 HOH HOH . 
N 4 HOH B 38 319 32 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O12 B62 . . . C 2 -80.469 86.28 91.288 1 59.31 ? O12 B62 901 A 1 
HETATM 2 C C1 B62 . . . C 2 -79.535 85.519 91.484 1 57.93 ? C1 B62 901 A 1 
HETATM 3 N N2 B62 . . . C 2 -79.345 84.424 90.742 1 59.33 ? N2 B62 901 A 1 
HETATM 4 C C6 B62 . . . C 2 -78.656 85.777 92.63 1 58.16 ? C6 B62 901 A 1 
HETATM 5 N N7 B62 . . . C 2 -78.868 86.85 93.429 1 58.64 ? N7 B62 901 A 1 
HETATM 6 C C8 B62 . . . C 2 -78.165 86.919 94.704 1 57.5 ? C8 B62 901 A 1 
HETATM 7 C C11 B62 . . . C 2 -78.211 88.353 95.241 1 55.11 ? C11 B62 901 A 1 
HETATM 8 C C9 B62 . . . C 2 -76.747 86.323 94.554 1 58.46 ? C9 B62 901 A 1 
HETATM 9 N N10 B62 . . . C 2 -76.716 84.99 93.923 1 59.25 ? N10 B62 901 A 1 
HETATM 10 C C5 B62 . . . C 2 -77.572 84.77 92.889 1 59.67 ? C5 B62 901 A 1 
HETATM 11 N N4 B62 . . . C 2 -77.46 83.705 92.049 1 59.49 ? N4 B62 901 A 1 
HETATM 12 C C3 B62 . . . C 2 -78.313 83.564 90.983 1 60.84 ? C3 B62 901 A 1 
HETATM 13 N N13 B62 . . . C 2 -78.179 82.488 90.158 1 59.67 ? N13 B62 901 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           303 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           13 
#