data_3H2O # _model_server_result.job_id Z7T7cWKcdwSHHh4qWK2y6A _model_server_result.datetime_utc '2024-11-14 18:20:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3h2o # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":502}' # _entry.id 3H2O # _exptl.entry_id 3H2O _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 328.326 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-{[2-(2-amino-4-oxo-3,4,7,8-tetrahydropteridin-6-yl)ethyl]amino}benzoic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3H2O _cell.length_a 99.292 _cell.length_b 99.292 _cell.length_c 263.051 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3H2O _symmetry.cell_setting ? _symmetry.Int_Tables_number 180 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 62 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,I 1 1,2 B,F,G,H,J 2 1,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_475 -x-1,-y+2,z -1 0 0 0 -1 0 0 0 1 -198.584 171.978789 0 3 'crystal symmetry operation' 4_465 -x-1,-y+1,z -1 0 0 0 -1 0 0 0 1 -148.938 85.989394 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # _chem_comp.formula 'C15 H16 N6 O3' _chem_comp.formula_weight 328.326 _chem_comp.id B63 _chem_comp.mon_nstd_flag . _chem_comp.name '4-{[2-(2-amino-4-oxo-3,4,7,8-tetrahydropteridin-6-yl)ethyl]amino}benzoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O3 C15 B63 doub 70 n n C15 C12 B63 sing 71 n n C15 O2 B63 sing 72 n n O2 HO2 B63 sing 73 n n C12 C11 B63 sing 74 n y C11 H11 B63 sing 75 n n C10 C11 B63 doub 76 n y C10 H10 B63 sing 77 n n C13 C12 B63 doub 78 n y C13 H13 B63 sing 79 n n C14 C13 B63 sing 80 n y C14 C9 B63 doub 81 n y C14 H14 B63 sing 82 n n C9 C10 B63 sing 83 n y N6 C9 B63 sing 84 n n N6 C2 B63 sing 85 n n N6 HN6 B63 sing 86 n n C2 H2 B63 sing 87 n n C2 H2A B63 sing 88 n n C1 C2 B63 sing 89 n n C1 H1 B63 sing 90 n n C1 H1A B63 sing 91 n n C3 C1 B63 sing 92 n n C3 C4 B63 sing 93 n n N2 C4 B63 sing 94 n n C5 N2 B63 sing 95 n n N5 C5 B63 sing 96 n n C8 N5 B63 doub 97 n n N4 C8 B63 sing 98 n n N4 HN4 B63 sing 99 n n N4 HN4A B63 sing 100 n n N3 C8 B63 sing 101 n n N3 C7 B63 sing 102 n n C7 C6 B63 sing 103 n n O1 C7 B63 doub 104 n n C6 C5 B63 doub 105 n n C6 N1 B63 sing 106 n n N1 C3 B63 doub 107 n n C4 H4 B63 sing 108 n n N2 H141 B63 sing 109 n n N3 H15 B63 sing 110 n n C4 H16 B63 sing 111 n n # _atom_sites.entry_id 3H2O _atom_sites.fract_transf_matrix[1][1] 0.010071 _atom_sites.fract_transf_matrix[1][2] 0.005815 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011629 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003802 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 B63 A 1 501 501 B63 B63 . D 3 SO4 A 1 278 1 SO4 SO4 . E 3 SO4 A 1 279 2 SO4 SO4 . F 2 B63 B 1 502 502 B63 B63 . G 3 SO4 B 1 278 3 SO4 SO4 . H 3 SO4 B 1 279 4 SO4 SO4 . I 4 HOH A 1 280 1 HOH HOH . I 4 HOH A 2 281 3 HOH HOH . J 4 HOH B 1 280 4 HOH HOH . J 4 HOH B 2 281 5 HOH HOH . J 4 HOH B 3 282 6 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O3 B63 . . . F 2 -58.247 52.258 135.732 1 43.48 ? O3 B63 502 B 1 HETATM 2 C C15 B63 . . . F 2 -58.662 52.973 134.765 1 41.14 ? C15 B63 502 B 1 HETATM 3 O O2 B63 . . . F 2 -59.013 52.457 133.695 1 41.62 ? O2 B63 502 B 1 HETATM 4 C C12 B63 . . . F 2 -58.782 54.469 134.799 1 38.57 ? C12 B63 502 B 1 HETATM 5 C C11 B63 . . . F 2 -59.272 55.1 133.674 1 36.02 ? C11 B63 502 B 1 HETATM 6 C C10 B63 . . . F 2 -59.394 56.475 133.656 1 38.09 ? C10 B63 502 B 1 HETATM 7 C C13 B63 . . . F 2 -58.423 55.206 135.912 1 37.93 ? C13 B63 502 B 1 HETATM 8 C C14 B63 . . . F 2 -58.543 56.588 135.89 1 39.63 ? C14 B63 502 B 1 HETATM 9 C C9 B63 . . . F 2 -59.041 57.246 134.768 1 39.88 ? C9 B63 502 B 1 HETATM 10 N N6 B63 . . . F 2 -59.105 58.614 134.769 1 40.75 ? N6 B63 502 B 1 HETATM 11 C C2 B63 . . . F 2 -60.135 59.411 134.113 1 42.16 ? C2 B63 502 B 1 HETATM 12 C C1 B63 . . . F 2 -61.542 58.823 134.287 1 42.7 ? C1 B63 502 B 1 HETATM 13 C C3 B63 . . . F 2 -62.382 59.596 135.261 1 42.93 ? C3 B63 502 B 1 HETATM 14 C C4 B63 . . . F 2 -62.548 61.083 135.084 1 43.71 ? C4 B63 502 B 1 HETATM 15 N N2 B63 . . . F 2 -63.392 61.735 136.083 1 42.39 ? N2 B63 502 B 1 HETATM 16 C C5 B63 . . . F 2 -63.949 61.057 137.076 1 42.95 ? C5 B63 502 B 1 HETATM 17 N N5 B63 . . . F 2 -64.73 61.679 137.985 1 43.82 ? N5 B63 502 B 1 HETATM 18 C C8 B63 . . . F 2 -65.355 61.058 139.018 1 44.02 ? C8 B63 502 B 1 HETATM 19 N N4 B63 . . . F 2 -66.134 61.825 139.868 1 42.69 ? N4 B63 502 B 1 HETATM 20 N N3 B63 . . . F 2 -65.201 59.71 139.171 1 44.35 ? N3 B63 502 B 1 HETATM 21 C C7 B63 . . . F 2 -64.441 58.948 138.337 1 44.16 ? C7 B63 502 B 1 HETATM 22 O O1 B63 . . . F 2 -64.327 57.703 138.508 1 43.35 ? O1 B63 502 B 1 HETATM 23 C C6 B63 . . . F 2 -63.732 59.609 137.201 1 44.01 ? C6 B63 502 B 1 HETATM 24 N N1 B63 . . . F 2 -62.961 58.952 136.292 1 44.21 ? N1 B63 502 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 314 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 24 #