data_3H3O # _model_server_result.job_id NIFZXupL00FKfgaYbChaQw _model_server_result.datetime_utc '2024-12-26 22:23:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3h3o # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":508}' # _entry.id 3H3O # _exptl.entry_id 3H3O _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 114.13 _cell.angle_gamma 90 _cell.entry_id 3H3O _cell.length_a 98.844 _cell.length_b 104.275 _cell.length_c 114.242 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3H3O _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PQS dimeric 2 author_and_software_defined_assembly 1 PQS dimeric 2 author_and_software_defined_assembly 2 PISA tetrameric 4 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,I,J,K,L,M,N,O,V,W 1 1 C,D,P,Q,R,S,T,U,X,Y 2 1 A,B,E,F,G,H,I,J,K,L,M,N,O,V,W 3 1 C,D,P,Q,R,S,T,U,X,Y 3 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 1_556 x,y,z+1 1 0 0 0 1 0 0 0 1 -46.703085 0 104.259563 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 G N N ? 3 H N N ? 3 N N N ? 3 O N N ? 3 S N N ? 3 U N N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 256 n n P O2 PO4 sing 257 n n P O3 PO4 sing 258 n n P O4 PO4 sing 259 n n # _atom_sites.entry_id 3H3O _atom_sites.fract_transf_matrix[1][1] 0.010117 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004532 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00959 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009591 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 EDO O 1 1000 1000 EDO EDO . F 3 PO4 O 1 507 1 PO4 PO4 . G 3 PO4 O 1 508 5 PO4 PO4 . H 3 PO4 O 1 509 7 PO4 PO4 . I 2 EDO X 1 1001 1001 EDO EDO . J 2 EDO X 1 3125 3125 EDO EDO . K 2 EDO X 1 3126 3126 EDO EDO . L 2 EDO X 1 3132 3132 EDO EDO . M 2 EDO X 1 3133 3133 EDO EDO . N 3 PO4 X 1 507 2 PO4 PO4 . O 3 PO4 X 1 508 6 PO4 PO4 . P 2 EDO B 1 1002 1002 EDO EDO . Q 2 EDO B 1 3130 3130 EDO EDO . R 2 EDO B 1 3131 3131 EDO EDO . S 3 PO4 B 1 507 3 PO4 PO4 . T 2 EDO C 1 1003 1003 EDO EDO . U 3 PO4 C 1 507 4 PO4 PO4 . V 4 HOH O 1 510 4 HOH HOH . V 4 HOH O 2 511 5 HOH HOH . V 4 HOH O 3 512 6 HOH HOH . V 4 HOH O 4 513 8 HOH HOH . V 4 HOH O 5 514 12 HOH HOH . V 4 HOH O 6 515 14 HOH HOH . V 4 HOH O 7 516 18 HOH HOH . V 4 HOH O 8 517 22 HOH HOH . V 4 HOH O 9 518 33 HOH HOH . V 4 HOH O 10 519 34 HOH HOH . V 4 HOH O 11 520 38 HOH HOH . V 4 HOH O 12 521 42 HOH HOH . V 4 HOH O 13 522 56 HOH HOH . V 4 HOH O 14 523 59 HOH HOH . V 4 HOH O 15 524 61 HOH HOH . V 4 HOH O 16 525 65 HOH HOH . V 4 HOH O 17 526 70 HOH HOH . V 4 HOH O 18 527 80 HOH HOH . V 4 HOH O 19 528 86 HOH HOH . V 4 HOH O 20 529 87 HOH HOH . V 4 HOH O 21 530 94 HOH HOH . V 4 HOH O 22 531 97 HOH HOH . V 4 HOH O 23 532 98 HOH HOH . V 4 HOH O 24 533 99 HOH HOH . V 4 HOH O 25 534 102 HOH HOH . V 4 HOH O 26 535 106 HOH HOH . V 4 HOH O 27 536 109 HOH HOH . V 4 HOH O 28 537 122 HOH HOH . V 4 HOH O 29 538 123 HOH HOH . V 4 HOH O 30 539 125 HOH HOH . V 4 HOH O 31 540 126 HOH HOH . V 4 HOH O 32 541 127 HOH HOH . V 4 HOH O 33 542 134 HOH HOH . V 4 HOH O 34 543 137 HOH HOH . V 4 HOH O 35 544 143 HOH HOH . V 4 HOH O 36 545 148 HOH HOH . V 4 HOH O 37 546 149 HOH HOH . V 4 HOH O 38 547 154 HOH HOH . V 4 HOH O 39 548 160 HOH HOH . V 4 HOH O 40 549 162 HOH HOH . V 4 HOH O 41 550 172 HOH HOH . V 4 HOH O 42 551 181 HOH HOH . V 4 HOH O 43 552 185 HOH HOH . V 4 HOH O 44 553 196 HOH HOH . V 4 HOH O 45 554 203 HOH HOH . V 4 HOH O 46 555 205 HOH HOH . V 4 HOH O 47 556 211 HOH HOH . V 4 HOH O 48 557 215 HOH HOH . V 4 HOH O 49 558 223 HOH HOH . V 4 HOH O 50 559 225 HOH HOH . V 4 HOH O 51 560 235 HOH HOH . V 4 HOH O 52 561 242 HOH HOH . V 4 HOH O 53 562 243 HOH HOH . V 4 HOH O 54 563 245 HOH HOH . V 4 HOH O 55 564 249 HOH HOH . V 4 HOH O 56 565 2 HOH HOH . V 4 HOH O 57 566 251 HOH HOH . W 4 HOH X 1 509 7 HOH HOH . W 4 HOH X 2 510 11 HOH HOH . W 4 HOH X 3 511 13 HOH HOH . W 4 HOH X 4 512 15 HOH HOH . W 4 HOH X 5 513 16 HOH HOH . W 4 HOH X 6 514 19 HOH HOH . W 4 HOH X 7 515 20 HOH HOH . W 4 HOH X 8 516 24 HOH HOH . W 4 HOH X 9 517 26 HOH HOH . W 4 HOH X 10 518 43 HOH HOH . W 4 HOH X 11 519 51 HOH HOH . W 4 HOH X 12 520 52 HOH HOH . W 4 HOH X 13 521 55 HOH HOH . W 4 HOH X 14 522 63 HOH HOH . W 4 HOH X 15 523 67 HOH HOH . W 4 HOH X 16 524 72 HOH HOH . W 4 HOH X 17 525 75 HOH HOH . W 4 HOH X 18 526 79 HOH HOH . W 4 HOH X 19 527 84 HOH HOH . W 4 HOH X 20 528 91 HOH HOH . W 4 HOH X 21 529 95 HOH HOH . W 4 HOH X 22 530 100 HOH HOH . W 4 HOH X 23 531 101 HOH HOH . W 4 HOH X 24 532 103 HOH HOH . W 4 HOH X 25 533 105 HOH HOH . W 4 HOH X 26 534 112 HOH HOH . W 4 HOH X 27 535 114 HOH HOH . W 4 HOH X 28 536 115 HOH HOH . W 4 HOH X 29 537 119 HOH HOH . W 4 HOH X 30 538 129 HOH HOH . W 4 HOH X 31 539 135 HOH HOH . W 4 HOH X 32 540 140 HOH HOH . W 4 HOH X 33 541 142 HOH HOH . W 4 HOH X 34 542 157 HOH HOH . W 4 HOH X 35 543 164 HOH HOH . W 4 HOH X 36 544 171 HOH HOH . W 4 HOH X 37 545 173 HOH HOH . W 4 HOH X 38 546 174 HOH HOH . W 4 HOH X 39 547 176 HOH HOH . W 4 HOH X 40 548 177 HOH HOH . W 4 HOH X 41 549 178 HOH HOH . W 4 HOH X 42 550 180 HOH HOH . W 4 HOH X 43 551 186 HOH HOH . W 4 HOH X 44 552 187 HOH HOH . W 4 HOH X 45 553 190 HOH HOH . W 4 HOH X 46 554 193 HOH HOH . W 4 HOH X 47 555 195 HOH HOH . W 4 HOH X 48 556 198 HOH HOH . W 4 HOH X 49 557 207 HOH HOH . W 4 HOH X 50 558 208 HOH HOH . W 4 HOH X 51 559 212 HOH HOH . W 4 HOH X 52 560 214 HOH HOH . W 4 HOH X 53 561 219 HOH HOH . W 4 HOH X 54 562 222 HOH HOH . W 4 HOH X 55 563 224 HOH HOH . W 4 HOH X 56 564 229 HOH HOH . W 4 HOH X 57 565 230 HOH HOH . W 4 HOH X 58 566 234 HOH HOH . W 4 HOH X 59 567 237 HOH HOH . W 4 HOH X 60 568 239 HOH HOH . W 4 HOH X 61 569 241 HOH HOH . W 4 HOH X 62 570 246 HOH HOH . W 4 HOH X 63 571 252 HOH HOH . W 4 HOH X 64 572 253 HOH HOH . W 4 HOH X 65 573 254 HOH HOH . W 4 HOH X 66 574 1 HOH HOH . X 4 HOH B 1 508 3 HOH HOH . X 4 HOH B 2 509 10 HOH HOH . X 4 HOH B 3 510 23 HOH HOH . X 4 HOH B 4 511 25 HOH HOH . X 4 HOH B 5 512 35 HOH HOH . X 4 HOH B 6 513 39 HOH HOH . X 4 HOH B 7 514 40 HOH HOH . X 4 HOH B 8 515 49 HOH HOH . X 4 HOH B 9 516 60 HOH HOH . X 4 HOH B 10 517 66 HOH HOH . X 4 HOH B 11 518 71 HOH HOH . X 4 HOH B 12 519 74 HOH HOH . X 4 HOH B 13 520 81 HOH HOH . X 4 HOH B 14 521 88 HOH HOH . X 4 HOH B 15 522 107 HOH HOH . X 4 HOH B 16 523 108 HOH HOH . X 4 HOH B 17 524 111 HOH HOH . X 4 HOH B 18 525 113 HOH HOH . X 4 HOH B 19 526 130 HOH HOH . X 4 HOH B 20 527 141 HOH HOH . X 4 HOH B 21 528 144 HOH HOH . X 4 HOH B 22 529 150 HOH HOH . X 4 HOH B 23 530 158 HOH HOH . X 4 HOH B 24 531 169 HOH HOH . X 4 HOH B 25 532 175 HOH HOH . X 4 HOH B 26 533 191 HOH HOH . X 4 HOH B 27 534 194 HOH HOH . X 4 HOH B 28 535 197 HOH HOH . X 4 HOH B 29 536 199 HOH HOH . X 4 HOH B 30 537 201 HOH HOH . X 4 HOH B 31 538 204 HOH HOH . X 4 HOH B 32 539 221 HOH HOH . X 4 HOH B 33 540 228 HOH HOH . X 4 HOH B 34 541 232 HOH HOH . X 4 HOH B 35 542 236 HOH HOH . X 4 HOH B 36 543 240 HOH HOH . X 4 HOH B 37 544 255 HOH HOH . X 4 HOH B 38 545 256 HOH HOH . X 4 HOH B 39 546 257 HOH HOH . X 4 HOH B 40 547 258 HOH HOH . X 4 HOH B 41 548 259 HOH HOH . X 4 HOH B 42 549 260 HOH HOH . X 4 HOH B 43 550 261 HOH HOH . X 4 HOH B 44 551 262 HOH HOH . X 4 HOH B 45 552 263 HOH HOH . X 4 HOH B 46 553 264 HOH HOH . X 4 HOH B 47 565 250 HOH HOH . Y 4 HOH C 1 508 9 HOH HOH . Y 4 HOH C 2 509 21 HOH HOH . Y 4 HOH C 3 510 28 HOH HOH . Y 4 HOH C 4 511 30 HOH HOH . Y 4 HOH C 5 512 31 HOH HOH . Y 4 HOH C 6 513 48 HOH HOH . Y 4 HOH C 7 514 53 HOH HOH . Y 4 HOH C 8 515 57 HOH HOH . Y 4 HOH C 9 516 62 HOH HOH . Y 4 HOH C 10 517 69 HOH HOH . Y 4 HOH C 11 518 90 HOH HOH . Y 4 HOH C 12 519 92 HOH HOH . Y 4 HOH C 13 520 116 HOH HOH . Y 4 HOH C 14 521 120 HOH HOH . Y 4 HOH C 15 522 131 HOH HOH . Y 4 HOH C 16 523 136 HOH HOH . Y 4 HOH C 17 524 145 HOH HOH . Y 4 HOH C 18 525 163 HOH HOH . Y 4 HOH C 19 526 168 HOH HOH . Y 4 HOH C 20 527 184 HOH HOH . Y 4 HOH C 21 528 192 HOH HOH . Y 4 HOH C 22 529 202 HOH HOH . Y 4 HOH C 23 530 209 HOH HOH . Y 4 HOH C 24 531 210 HOH HOH . Y 4 HOH C 25 532 213 HOH HOH . Y 4 HOH C 26 533 217 HOH HOH . Y 4 HOH C 27 534 227 HOH HOH . Y 4 HOH C 28 535 238 HOH HOH . Y 4 HOH C 29 536 244 HOH HOH . Y 4 HOH C 30 537 265 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . G 3 20.387 14.57 46.848 1 60.25 ? P PO4 508 O 1 HETATM 2 O O1 PO4 . . . G 3 20.406 15.783 45.985 1 58.94 ? O1 PO4 508 O 1 HETATM 3 O O2 PO4 . . . G 3 18.981 14.269 47.271 1 46.6 ? O2 PO4 508 O 1 HETATM 4 O O3 PO4 . . . G 3 20.941 13.407 46.069 1 49.7 ? O3 PO4 508 O 1 HETATM 5 O O4 PO4 . . . G 3 21.223 14.811 48.067 1 55.78 ? O4 PO4 508 O 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 29 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #