data_3H3P # _model_server_result.job_id EyPvz2CwdegTsiVXvUH-MQ _model_server_result.datetime_utc '2025-03-01 19:25:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3h3p # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":136}' # _entry.id 3H3P # _exptl.entry_id 3H3P _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3H3P _cell.length_a 92.4 _cell.length_b 92.4 _cell.length_c 272.79 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3H3P _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA trimeric 3 author_and_software_defined_assembly 1 ? trimeric 3 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,G,H,J 1 1 B,D,F,I,K,L 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 24 H CYS 22 1_555 A SG CYS 98 H CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? disulf ? disulf2 B SG CYS 24 I CYS 22 1_555 B SG CYS 98 I CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? disulf ? disulf3 C SG CYS 25 L CYS 23 1_555 C SG CYS 91 L CYS 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.099 ? disulf ? disulf4 D SG CYS 25 M CYS 23 1_555 D SG CYS 91 M CYS 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? metalc ? metalc1 A OE1 GLU 12 H GLU 10 1_555 G CA CA . H CA 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.902 ? metalc ? metalc2 A OE2 GLU 12 H GLU 10 1_555 G CA CA . H CA 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.979 ? metalc ? metalc3 A O THR 21 H THR 19 1_555 G CA CA . H CA 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.405 ? metalc ? metalc4 G CA CA . H CA 136 1_555 H O HOH . H HOH 149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? metalc ? metalc5 G CA CA . H CA 136 1_555 I O HOH . I HOH 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.508 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3H3P _atom_sites.fract_transf_matrix[1][1] 0.010823 _atom_sites.fract_transf_matrix[1][2] 0.006248 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012497 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003666 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 CA H 1 136 1 CA CA . H 5 HOH H 1 137 3 HOH HOH . H 5 HOH H 2 138 6 HOH HOH . H 5 HOH H 3 139 8 HOH HOH . H 5 HOH H 4 140 12 HOH HOH . H 5 HOH H 5 141 14 HOH HOH . H 5 HOH H 6 142 23 HOH HOH . H 5 HOH H 7 143 24 HOH HOH . H 5 HOH H 8 144 26 HOH HOH . H 5 HOH H 9 145 30 HOH HOH . H 5 HOH H 10 146 31 HOH HOH . H 5 HOH H 11 147 35 HOH HOH . H 5 HOH H 12 148 36 HOH HOH . H 5 HOH H 13 149 43 HOH HOH . H 5 HOH H 14 150 48 HOH HOH . H 5 HOH H 15 151 50 HOH HOH . H 5 HOH H 16 152 52 HOH HOH . H 5 HOH H 17 153 54 HOH HOH . H 5 HOH H 18 154 55 HOH HOH . I 5 HOH I 1 136 2 HOH HOH . I 5 HOH I 2 137 4 HOH HOH . I 5 HOH I 3 138 5 HOH HOH . I 5 HOH I 4 139 10 HOH HOH . I 5 HOH I 5 140 11 HOH HOH . I 5 HOH I 6 141 17 HOH HOH . I 5 HOH I 7 142 18 HOH HOH . I 5 HOH I 8 143 20 HOH HOH . I 5 HOH I 9 144 22 HOH HOH . I 5 HOH I 10 145 25 HOH HOH . I 5 HOH I 11 146 27 HOH HOH . I 5 HOH I 12 147 29 HOH HOH . I 5 HOH I 13 148 34 HOH HOH . I 5 HOH I 14 149 37 HOH HOH . I 5 HOH I 15 150 45 HOH HOH . I 5 HOH I 16 151 46 HOH HOH . I 5 HOH I 17 152 49 HOH HOH . I 5 HOH I 18 153 51 HOH HOH . J 5 HOH L 1 113 7 HOH HOH . J 5 HOH L 2 114 19 HOH HOH . J 5 HOH L 3 115 21 HOH HOH . J 5 HOH L 4 116 32 HOH HOH . J 5 HOH L 5 117 33 HOH HOH . J 5 HOH L 6 118 39 HOH HOH . J 5 HOH L 7 119 53 HOH HOH . K 5 HOH M 1 113 1 HOH HOH . K 5 HOH M 2 114 9 HOH HOH . K 5 HOH M 3 115 13 HOH HOH . K 5 HOH M 4 116 15 HOH HOH . K 5 HOH M 5 117 38 HOH HOH . K 5 HOH M 6 118 40 HOH HOH . K 5 HOH M 7 119 41 HOH HOH . K 5 HOH M 8 120 42 HOH HOH . K 5 HOH M 9 121 44 HOH HOH . K 5 HOH M 10 122 47 HOH HOH . L 5 HOH T 1 86 16 HOH HOH . L 5 HOH T 2 87 28 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 4 _atom_site.Cartn_x -10.596 _atom_site.Cartn_y -38.655 _atom_site.Cartn_z -5.609 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 57.54 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 136 _atom_site.auth_asym_id H _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #