data_3H45 # _model_server_result.job_id EFXgQcXAlkEya82fd9L0Qw _model_server_result.datetime_utc '2024-12-27 14:05:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3h45 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":1003}' # _entry.id 3H45 # _exptl.entry_id 3H45 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 114.55 _cell.angle_gamma 90 _cell.entry_id 3H45 _cell.length_a 98.606 _cell.length_b 105.194 _cell.length_c 114.305 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3H45 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PQS dimeric 2 author_and_software_defined_assembly 1 PQS dimeric 2 author_and_software_defined_assembly 2 PISA tetrameric 4 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,I,J,K,P,Q 1 1 C,D,L,M,N,O,R,S 2 1 A,B,E,F,G,H,I,J,K,P,Q 3 1 C,D,L,M,N,O,R,S 3 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 1_556 x,y,z+1 1 0 0 0 1 0 0 0 1 -47.492262 0 103.971718 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 J N N ? 2 L N N ? 2 N N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 70 n n C1 C2 EDO sing 71 n n C1 H11 EDO sing 72 n n C1 H12 EDO sing 73 n n O1 HO1 EDO sing 74 n n C2 O2 EDO sing 75 n n C2 H21 EDO sing 76 n n C2 H22 EDO sing 77 n n O2 HO2 EDO sing 78 n n # _atom_sites.entry_id 3H45 _atom_sites.fract_transf_matrix[1][1] 0.010141 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004632 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009506 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009618 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 EDO X 1 1000 1000 EDO EDO . F 2 EDO X 1 507 1 EDO EDO . G 3 PO4 X 1 508 2 PO4 PO4 . H 3 PO4 X 1 509 5 PO4 PO4 . I 3 PO4 X 1 510 7 PO4 PO4 . J 2 EDO O 1 1001 1001 EDO EDO . K 3 PO4 O 1 507 1 PO4 PO4 . L 2 EDO C 1 1002 1002 EDO EDO . M 3 PO4 C 1 507 3 PO4 PO4 . N 2 EDO D 1 1003 1003 EDO EDO . O 3 PO4 D 1 507 4 PO4 PO4 . P 4 HOH X 1 511 1 HOH HOH . P 4 HOH X 2 512 2 HOH HOH . P 4 HOH X 3 513 7 HOH HOH . P 4 HOH X 4 514 8 HOH HOH . P 4 HOH X 5 515 11 HOH HOH . P 4 HOH X 6 516 19 HOH HOH . P 4 HOH X 7 517 23 HOH HOH . P 4 HOH X 8 518 26 HOH HOH . P 4 HOH X 9 519 31 HOH HOH . P 4 HOH X 10 520 36 HOH HOH . P 4 HOH X 11 521 38 HOH HOH . P 4 HOH X 12 522 39 HOH HOH . P 4 HOH X 13 523 45 HOH HOH . P 4 HOH X 14 524 49 HOH HOH . P 4 HOH X 15 525 50 HOH HOH . P 4 HOH X 16 526 51 HOH HOH . P 4 HOH X 17 527 53 HOH HOH . P 4 HOH X 18 528 54 HOH HOH . P 4 HOH X 19 529 56 HOH HOH . P 4 HOH X 20 530 57 HOH HOH . P 4 HOH X 21 531 69 HOH HOH . P 4 HOH X 22 532 72 HOH HOH . P 4 HOH X 23 533 78 HOH HOH . P 4 HOH X 24 534 79 HOH HOH . P 4 HOH X 25 535 81 HOH HOH . P 4 HOH X 26 536 83 HOH HOH . P 4 HOH X 27 537 84 HOH HOH . P 4 HOH X 28 538 85 HOH HOH . P 4 HOH X 29 539 87 HOH HOH . P 4 HOH X 30 540 96 HOH HOH . P 4 HOH X 31 541 97 HOH HOH . P 4 HOH X 32 542 99 HOH HOH . P 4 HOH X 33 543 100 HOH HOH . P 4 HOH X 34 544 101 HOH HOH . P 4 HOH X 35 545 103 HOH HOH . P 4 HOH X 36 546 104 HOH HOH . P 4 HOH X 37 547 105 HOH HOH . P 4 HOH X 38 548 106 HOH HOH . P 4 HOH X 39 549 108 HOH HOH . P 4 HOH X 40 550 110 HOH HOH . P 4 HOH X 41 551 112 HOH HOH . P 4 HOH X 42 552 113 HOH HOH . P 4 HOH X 43 553 114 HOH HOH . P 4 HOH X 44 554 117 HOH HOH . P 4 HOH X 45 555 118 HOH HOH . P 4 HOH X 46 556 121 HOH HOH . P 4 HOH X 47 557 127 HOH HOH . P 4 HOH X 48 558 130 HOH HOH . P 4 HOH X 49 559 131 HOH HOH . P 4 HOH X 50 560 133 HOH HOH . P 4 HOH X 51 561 135 HOH HOH . P 4 HOH X 52 562 141 HOH HOH . P 4 HOH X 53 563 143 HOH HOH . P 4 HOH X 54 564 147 HOH HOH . P 4 HOH X 55 565 149 HOH HOH . P 4 HOH X 56 566 151 HOH HOH . P 4 HOH X 57 567 155 HOH HOH . P 4 HOH X 58 568 158 HOH HOH . P 4 HOH X 59 569 160 HOH HOH . P 4 HOH X 60 570 163 HOH HOH . P 4 HOH X 61 571 165 HOH HOH . P 4 HOH X 62 572 169 HOH HOH . P 4 HOH X 63 573 177 HOH HOH . P 4 HOH X 64 574 178 HOH HOH . P 4 HOH X 65 575 180 HOH HOH . P 4 HOH X 66 576 185 HOH HOH . P 4 HOH X 67 577 188 HOH HOH . P 4 HOH X 68 578 189 HOH HOH . P 4 HOH X 69 579 190 HOH HOH . P 4 HOH X 70 580 191 HOH HOH . P 4 HOH X 71 581 194 HOH HOH . P 4 HOH X 72 582 195 HOH HOH . P 4 HOH X 73 583 199 HOH HOH . P 4 HOH X 74 584 200 HOH HOH . P 4 HOH X 75 585 207 HOH HOH . P 4 HOH X 76 586 208 HOH HOH . P 4 HOH X 77 587 212 HOH HOH . P 4 HOH X 78 588 213 HOH HOH . P 4 HOH X 79 589 214 HOH HOH . P 4 HOH X 80 590 217 HOH HOH . P 4 HOH X 81 591 223 HOH HOH . P 4 HOH X 82 592 224 HOH HOH . P 4 HOH X 83 593 232 HOH HOH . P 4 HOH X 84 594 235 HOH HOH . P 4 HOH X 85 595 238 HOH HOH . P 4 HOH X 86 596 240 HOH HOH . P 4 HOH X 87 597 242 HOH HOH . P 4 HOH X 88 598 243 HOH HOH . P 4 HOH X 89 599 247 HOH HOH . P 4 HOH X 90 600 249 HOH HOH . P 4 HOH X 91 601 257 HOH HOH . P 4 HOH X 92 602 258 HOH HOH . P 4 HOH X 93 603 263 HOH HOH . P 4 HOH X 94 604 264 HOH HOH . P 4 HOH X 95 605 265 HOH HOH . P 4 HOH X 96 606 271 HOH HOH . P 4 HOH X 97 607 272 HOH HOH . P 4 HOH X 98 608 273 HOH HOH . P 4 HOH X 99 609 274 HOH HOH . P 4 HOH X 100 610 275 HOH HOH . P 4 HOH X 101 611 276 HOH HOH . P 4 HOH X 102 612 277 HOH HOH . P 4 HOH X 103 613 278 HOH HOH . P 4 HOH X 104 614 279 HOH HOH . P 4 HOH X 105 615 280 HOH HOH . P 4 HOH X 106 616 281 HOH HOH . P 4 HOH X 107 617 297 HOH HOH . P 4 HOH X 108 618 299 HOH HOH . Q 4 HOH O 1 508 5 HOH HOH . Q 4 HOH O 2 509 9 HOH HOH . Q 4 HOH O 3 510 12 HOH HOH . Q 4 HOH O 4 511 15 HOH HOH . Q 4 HOH O 5 512 24 HOH HOH . Q 4 HOH O 6 513 27 HOH HOH . Q 4 HOH O 7 514 28 HOH HOH . Q 4 HOH O 8 515 29 HOH HOH . Q 4 HOH O 9 516 32 HOH HOH . Q 4 HOH O 10 517 37 HOH HOH . Q 4 HOH O 11 518 40 HOH HOH . Q 4 HOH O 12 519 42 HOH HOH . Q 4 HOH O 13 520 44 HOH HOH . Q 4 HOH O 14 521 47 HOH HOH . Q 4 HOH O 15 522 48 HOH HOH . Q 4 HOH O 16 523 52 HOH HOH . Q 4 HOH O 17 524 58 HOH HOH . Q 4 HOH O 18 525 61 HOH HOH . Q 4 HOH O 19 526 67 HOH HOH . Q 4 HOH O 20 527 68 HOH HOH . Q 4 HOH O 21 528 73 HOH HOH . Q 4 HOH O 22 529 74 HOH HOH . Q 4 HOH O 23 530 76 HOH HOH . Q 4 HOH O 24 531 77 HOH HOH . Q 4 HOH O 25 532 80 HOH HOH . Q 4 HOH O 26 533 88 HOH HOH . Q 4 HOH O 27 534 89 HOH HOH . Q 4 HOH O 28 535 91 HOH HOH . Q 4 HOH O 29 536 92 HOH HOH . Q 4 HOH O 30 537 94 HOH HOH . Q 4 HOH O 31 538 107 HOH HOH . Q 4 HOH O 32 539 109 HOH HOH . Q 4 HOH O 33 540 111 HOH HOH . Q 4 HOH O 34 541 116 HOH HOH . Q 4 HOH O 35 542 119 HOH HOH . Q 4 HOH O 36 543 123 HOH HOH . Q 4 HOH O 37 544 142 HOH HOH . Q 4 HOH O 38 545 144 HOH HOH . Q 4 HOH O 39 546 146 HOH HOH . Q 4 HOH O 40 547 148 HOH HOH . Q 4 HOH O 41 548 153 HOH HOH . Q 4 HOH O 42 549 156 HOH HOH . Q 4 HOH O 43 550 162 HOH HOH . Q 4 HOH O 44 551 164 HOH HOH . Q 4 HOH O 45 552 168 HOH HOH . Q 4 HOH O 46 553 170 HOH HOH . Q 4 HOH O 47 554 173 HOH HOH . Q 4 HOH O 48 555 174 HOH HOH . Q 4 HOH O 49 556 175 HOH HOH . Q 4 HOH O 50 557 176 HOH HOH . Q 4 HOH O 51 558 183 HOH HOH . Q 4 HOH O 52 559 186 HOH HOH . Q 4 HOH O 53 560 196 HOH HOH . Q 4 HOH O 54 561 197 HOH HOH . Q 4 HOH O 55 562 198 HOH HOH . Q 4 HOH O 56 563 202 HOH HOH . Q 4 HOH O 57 564 204 HOH HOH . Q 4 HOH O 58 565 209 HOH HOH . Q 4 HOH O 59 566 215 HOH HOH . Q 4 HOH O 60 567 218 HOH HOH . Q 4 HOH O 61 568 227 HOH HOH . Q 4 HOH O 62 569 231 HOH HOH . Q 4 HOH O 63 570 234 HOH HOH . Q 4 HOH O 64 571 236 HOH HOH . Q 4 HOH O 65 572 239 HOH HOH . Q 4 HOH O 66 573 245 HOH HOH . Q 4 HOH O 67 574 246 HOH HOH . Q 4 HOH O 68 575 250 HOH HOH . Q 4 HOH O 69 576 254 HOH HOH . Q 4 HOH O 70 577 261 HOH HOH . Q 4 HOH O 71 578 282 HOH HOH . Q 4 HOH O 72 579 283 HOH HOH . Q 4 HOH O 73 580 284 HOH HOH . Q 4 HOH O 74 581 285 HOH HOH . Q 4 HOH O 75 582 295 HOH HOH . Q 4 HOH O 76 583 2 HOH HOH . R 4 HOH C 1 508 3 HOH HOH . R 4 HOH C 2 509 6 HOH HOH . R 4 HOH C 3 510 10 HOH HOH . R 4 HOH C 4 511 13 HOH HOH . R 4 HOH C 5 512 14 HOH HOH . R 4 HOH C 6 513 18 HOH HOH . R 4 HOH C 7 514 20 HOH HOH . R 4 HOH C 8 515 21 HOH HOH . R 4 HOH C 9 516 22 HOH HOH . R 4 HOH C 10 517 25 HOH HOH . R 4 HOH C 11 518 30 HOH HOH . R 4 HOH C 12 519 33 HOH HOH . R 4 HOH C 13 520 35 HOH HOH . R 4 HOH C 14 521 46 HOH HOH . R 4 HOH C 15 522 60 HOH HOH . R 4 HOH C 16 523 62 HOH HOH . R 4 HOH C 17 524 63 HOH HOH . R 4 HOH C 18 525 64 HOH HOH . R 4 HOH C 19 526 65 HOH HOH . R 4 HOH C 20 527 70 HOH HOH . R 4 HOH C 21 528 71 HOH HOH . R 4 HOH C 22 529 75 HOH HOH . R 4 HOH C 23 530 82 HOH HOH . R 4 HOH C 24 531 86 HOH HOH . R 4 HOH C 25 532 95 HOH HOH . R 4 HOH C 26 533 102 HOH HOH . R 4 HOH C 27 534 120 HOH HOH . R 4 HOH C 28 535 124 HOH HOH . R 4 HOH C 29 536 125 HOH HOH . R 4 HOH C 30 537 129 HOH HOH . R 4 HOH C 31 538 138 HOH HOH . R 4 HOH C 32 539 139 HOH HOH . R 4 HOH C 33 540 140 HOH HOH . R 4 HOH C 34 541 150 HOH HOH . R 4 HOH C 35 542 152 HOH HOH . R 4 HOH C 36 543 157 HOH HOH . R 4 HOH C 37 544 159 HOH HOH . R 4 HOH C 38 545 166 HOH HOH . R 4 HOH C 39 546 167 HOH HOH . R 4 HOH C 40 547 171 HOH HOH . R 4 HOH C 41 548 181 HOH HOH . R 4 HOH C 42 549 184 HOH HOH . R 4 HOH C 43 550 192 HOH HOH . R 4 HOH C 44 551 193 HOH HOH . R 4 HOH C 45 552 201 HOH HOH . R 4 HOH C 46 553 203 HOH HOH . R 4 HOH C 47 554 206 HOH HOH . R 4 HOH C 48 555 210 HOH HOH . R 4 HOH C 49 556 216 HOH HOH . R 4 HOH C 50 557 222 HOH HOH . R 4 HOH C 51 558 225 HOH HOH . R 4 HOH C 52 559 226 HOH HOH . R 4 HOH C 53 560 233 HOH HOH . R 4 HOH C 54 561 237 HOH HOH . R 4 HOH C 55 562 244 HOH HOH . R 4 HOH C 56 563 248 HOH HOH . R 4 HOH C 57 564 251 HOH HOH . R 4 HOH C 58 565 255 HOH HOH . R 4 HOH C 59 566 256 HOH HOH . R 4 HOH C 60 567 259 HOH HOH . R 4 HOH C 61 568 260 HOH HOH . R 4 HOH C 62 569 262 HOH HOH . R 4 HOH C 63 570 266 HOH HOH . R 4 HOH C 64 571 268 HOH HOH . R 4 HOH C 65 572 269 HOH HOH . R 4 HOH C 66 573 270 HOH HOH . R 4 HOH C 67 574 286 HOH HOH . R 4 HOH C 68 575 287 HOH HOH . R 4 HOH C 69 576 288 HOH HOH . R 4 HOH C 70 577 289 HOH HOH . R 4 HOH C 71 578 296 HOH HOH . R 4 HOH C 72 579 298 HOH HOH . S 4 HOH D 1 508 4 HOH HOH . S 4 HOH D 2 509 16 HOH HOH . S 4 HOH D 3 510 17 HOH HOH . S 4 HOH D 4 511 34 HOH HOH . S 4 HOH D 5 512 41 HOH HOH . S 4 HOH D 6 513 43 HOH HOH . S 4 HOH D 7 514 55 HOH HOH . S 4 HOH D 8 515 59 HOH HOH . S 4 HOH D 9 516 66 HOH HOH . S 4 HOH D 10 517 90 HOH HOH . S 4 HOH D 11 518 93 HOH HOH . S 4 HOH D 12 519 98 HOH HOH . S 4 HOH D 13 520 115 HOH HOH . S 4 HOH D 14 521 122 HOH HOH . S 4 HOH D 15 522 126 HOH HOH . S 4 HOH D 16 523 128 HOH HOH . S 4 HOH D 17 524 132 HOH HOH . S 4 HOH D 18 525 134 HOH HOH . S 4 HOH D 19 526 136 HOH HOH . S 4 HOH D 20 527 137 HOH HOH . S 4 HOH D 21 528 145 HOH HOH . S 4 HOH D 22 529 154 HOH HOH . S 4 HOH D 23 530 161 HOH HOH . S 4 HOH D 24 531 172 HOH HOH . S 4 HOH D 25 532 179 HOH HOH . S 4 HOH D 26 533 182 HOH HOH . S 4 HOH D 27 534 187 HOH HOH . S 4 HOH D 28 535 205 HOH HOH . S 4 HOH D 29 536 211 HOH HOH . S 4 HOH D 30 537 219 HOH HOH . S 4 HOH D 31 538 220 HOH HOH . S 4 HOH D 32 539 221 HOH HOH . S 4 HOH D 33 540 228 HOH HOH . S 4 HOH D 34 541 229 HOH HOH . S 4 HOH D 35 542 230 HOH HOH . S 4 HOH D 36 543 241 HOH HOH . S 4 HOH D 37 544 252 HOH HOH . S 4 HOH D 38 545 253 HOH HOH . S 4 HOH D 39 546 267 HOH HOH . S 4 HOH D 40 547 290 HOH HOH . S 4 HOH D 41 548 291 HOH HOH . S 4 HOH D 42 549 292 HOH HOH . S 4 HOH D 43 550 293 HOH HOH . S 4 HOH D 44 551 294 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . N 2 11.171 -9.555 -15.796 1 39.14 ? C1 EDO 1003 D 1 HETATM 2 O O1 EDO . . . N 2 9.794 -9.46 -15.41 1 29.23 ? O1 EDO 1003 D 1 HETATM 3 C C2 EDO . . . N 2 12.037 -8.703 -14.855 1 44.12 ? C2 EDO 1003 D 1 HETATM 4 O O2 EDO . . . N 2 13.264 -8.332 -15.514 1 37.07 ? O2 EDO 1003 D 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 4 #