data_3H5G # _model_server_result.job_id cBk0klEcSYbBTeBNK9aegA _model_server_result.datetime_utc '2024-12-13 03:39:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3h5g # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":31}' # _entry.id 3H5G # _exptl.entry_id 3H5G _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 119.6 _cell.angle_gamma 90 _cell.entry_id 3H5G _cell.length_a 76.723 _cell.length_b 29.237 _cell.length_c 44.385 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3H5G _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ACE 1 A ACE 0 1_555 A N GLU 2 A GLU 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale2 A C LYS 16 A LYS 15 1_555 A N LEI 17 A LEI 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale3 A C LEI 17 A LEI 16 1_555 A N GLN 18 A GLN 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale4 A C GLY 30 A GLY 29 1_555 A N NH2 31 A NH2 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.278 ? covale ? covale5 B C ACE 1 B ACE 0 1_555 B N GLU 2 B GLU 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.316 ? covale ? covale6 B C LYS 16 B LYS 15 1_555 B N LEI 17 B LEI 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale7 B C LEI 17 B LEI 16 1_555 B N GLN 18 B GLN 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale8 B C GLY 30 B GLY 29 1_555 B N NH2 31 B NH2 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.259 ? covale ? covale9 C C ACE 1 C ACE 0 1_555 C N GLU 2 C GLU 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.317 ? covale ? covale10 C C LYS 16 C LYS 15 1_555 C N LEI 17 C LEI 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale11 C C LEI 17 C LEI 16 1_555 C N GLN 18 C GLN 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale12 C C GLY 30 C GLY 29 1_555 C N NH2 31 C NH2 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.284 ? metalc ? metalc1 A OE1 GLU 7 A GLU 6 1_555 F ZN ZN . A ZN 33 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? metalc ? metalc2 A OE2 GLU 25 A GLU 24 1_555 G ZN ZN . A ZN 34 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.058 ? metalc ? metalc3 A OE1 GLU 25 A GLU 24 1_555 H ZN ZN . A ZN 35 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.282 ? metalc ? metalc4 A OE2 GLU 25 A GLU 24 1_555 H ZN ZN . A ZN 35 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.827 ? metalc ? metalc5 A NE2 HIS 29 A HIS 28 1_555 D ZN ZN . A ZN 31 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.972 ? metalc ? metalc6 F ZN ZN . A ZN 33 1_555 C OE2 GLU 2 C GLU 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.776 ? metalc ? metalc7 F ZN ZN . A ZN 33 1_555 N O HOH . C HOH 56 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.887 ? metalc ? metalc8 G ZN ZN . A ZN 34 1_555 L O HOH . A HOH 41 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.909 ? metalc ? metalc9 C OE2 GLU 7 C GLU 6 1_555 J ZN ZN . C ZN 31 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.205 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3H5G _atom_sites.fract_transf_matrix[1][1] 0.013034 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007404 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.034203 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.025912 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 ZN A 1 31 31 ZN ZN . E 2 ZN A 1 32 32 ZN ZN . F 2 ZN A 1 33 33 ZN ZN . G 2 ZN A 1 34 34 ZN ZN . H 2 ZN A 1 35 35 ZN ZN . I 2 ZN B 1 31 31 ZN ZN . J 2 ZN C 1 31 31 ZN ZN . K 3 ACT C 1 32 32 ACT ACT . L 4 HOH A 1 36 36 HOH HOH . L 4 HOH A 2 37 37 HOH HOH . L 4 HOH A 3 38 38 HOH HOH . L 4 HOH A 4 39 39 HOH HOH . L 4 HOH A 5 40 40 HOH HOH . L 4 HOH A 6 41 41 HOH HOH . L 4 HOH A 7 42 42 HOH HOH . L 4 HOH A 8 43 43 HOH HOH . L 4 HOH A 9 44 44 HOH HOH . L 4 HOH A 10 45 45 HOH HOH . L 4 HOH A 11 46 46 HOH HOH . L 4 HOH A 12 47 47 HOH HOH . L 4 HOH A 13 48 48 HOH HOH . L 4 HOH A 14 49 49 HOH HOH . L 4 HOH A 15 50 50 HOH HOH . L 4 HOH A 16 51 51 HOH HOH . L 4 HOH A 17 52 52 HOH HOH . L 4 HOH A 18 53 53 HOH HOH . L 4 HOH A 19 54 54 HOH HOH . L 4 HOH A 20 55 55 HOH HOH . L 4 HOH A 21 56 56 HOH HOH . L 4 HOH A 22 57 57 HOH HOH . M 4 HOH B 1 32 32 HOH HOH . M 4 HOH B 2 33 33 HOH HOH . M 4 HOH B 3 34 34 HOH HOH . M 4 HOH B 4 35 35 HOH HOH . M 4 HOH B 5 36 36 HOH HOH . M 4 HOH B 6 37 37 HOH HOH . M 4 HOH B 7 38 38 HOH HOH . M 4 HOH B 8 39 39 HOH HOH . M 4 HOH B 9 40 40 HOH HOH . M 4 HOH B 10 41 41 HOH HOH . M 4 HOH B 11 42 42 HOH HOH . M 4 HOH B 12 43 43 HOH HOH . M 4 HOH B 13 44 44 HOH HOH . M 4 HOH B 14 45 45 HOH HOH . M 4 HOH B 15 46 46 HOH HOH . M 4 HOH B 16 48 48 HOH HOH . M 4 HOH B 17 55 55 HOH HOH . M 4 HOH B 18 57 57 HOH HOH . N 4 HOH C 1 33 33 HOH HOH . N 4 HOH C 2 34 34 HOH HOH . N 4 HOH C 3 35 35 HOH HOH . N 4 HOH C 4 36 36 HOH HOH . N 4 HOH C 5 37 37 HOH HOH . N 4 HOH C 6 38 38 HOH HOH . N 4 HOH C 7 39 39 HOH HOH . N 4 HOH C 8 40 40 HOH HOH . N 4 HOH C 9 41 41 HOH HOH . N 4 HOH C 10 42 42 HOH HOH . N 4 HOH C 11 43 43 HOH HOH . N 4 HOH C 12 45 45 HOH HOH . N 4 HOH C 13 46 46 HOH HOH . N 4 HOH C 14 47 47 HOH HOH . N 4 HOH C 15 52 52 HOH HOH . N 4 HOH C 16 54 54 HOH HOH . N 4 HOH C 17 56 56 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x 19.866 _atom_site.Cartn_y -6.383 _atom_site.Cartn_z -8.428 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 25.08 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 31 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #