data_3H6D # _model_server_result.job_id a-khNDD3bIOEtK9xzOW0og _model_server_result.datetime_utc '2024-11-17 03:27:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3h6d # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":200}' # _entry.id 3H6D # _exptl.entry_id 3H6D _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3H6D _cell.length_a 55.228 _cell.length_b 55.228 _cell.length_c 83.65 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3H6D _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? trimeric 3 author_defined_assembly 1 PISA monomeric 1 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F 1 1,2,3 A,B,C,D,E,F 2 1 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_545 -y,x-y-1,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 27.614 -47.828851 0 3 'crystal symmetry operation' 3_655 -x+y+1,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 55.228 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B MG MG . A MG 200 1_555 C O1B DUP . A DUP 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? metalc ? metalc2 B MG MG . A MG 200 1_555 C O1A DUP . A DUP 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? metalc ? metalc3 B MG MG . A MG 200 1_555 C O2G DUP . A DUP 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.13 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3H6D _atom_sites.fract_transf_matrix[1][1] 0.018107 _atom_sites.fract_transf_matrix[1][2] 0.010454 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020908 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011955 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 200 200 MG MG . C 3 DUP A 1 201 201 DUP DUP . D 4 TRS A 1 202 202 TRS TRS . E 4 TRS A 1 203 203 TRS TRS . F 5 HOH A 1 175 175 HOH HOH . F 5 HOH A 2 176 176 HOH HOH . F 5 HOH A 3 177 177 HOH HOH . F 5 HOH A 4 178 178 HOH HOH . F 5 HOH A 5 179 179 HOH HOH . F 5 HOH A 6 180 180 HOH HOH . F 5 HOH A 7 181 181 HOH HOH . F 5 HOH A 8 182 182 HOH HOH . F 5 HOH A 9 183 183 HOH HOH . F 5 HOH A 10 184 184 HOH HOH . F 5 HOH A 11 185 185 HOH HOH . F 5 HOH A 12 186 186 HOH HOH . F 5 HOH A 13 187 187 HOH HOH . F 5 HOH A 14 188 188 HOH HOH . F 5 HOH A 15 189 189 HOH HOH . F 5 HOH A 16 190 190 HOH HOH . F 5 HOH A 17 191 191 HOH HOH . F 5 HOH A 18 192 192 HOH HOH . F 5 HOH A 19 193 193 HOH HOH . F 5 HOH A 20 194 194 HOH HOH . F 5 HOH A 21 195 195 HOH HOH . F 5 HOH A 22 196 196 HOH HOH . F 5 HOH A 23 197 197 HOH HOH . F 5 HOH A 24 198 198 HOH HOH . F 5 HOH A 25 199 199 HOH HOH . F 5 HOH A 26 204 204 HOH HOH . F 5 HOH A 27 205 205 HOH HOH . F 5 HOH A 28 206 206 HOH HOH . F 5 HOH A 29 207 207 HOH HOH . F 5 HOH A 30 208 208 HOH HOH . F 5 HOH A 31 209 209 HOH HOH . F 5 HOH A 32 210 210 HOH HOH . F 5 HOH A 33 211 211 HOH HOH . F 5 HOH A 34 212 212 HOH HOH . F 5 HOH A 35 213 213 HOH HOH . F 5 HOH A 36 214 214 HOH HOH . F 5 HOH A 37 215 215 HOH HOH . F 5 HOH A 38 216 216 HOH HOH . F 5 HOH A 39 217 217 HOH HOH . F 5 HOH A 40 218 218 HOH HOH . F 5 HOH A 41 219 219 HOH HOH . F 5 HOH A 42 220 220 HOH HOH . F 5 HOH A 43 221 221 HOH HOH . F 5 HOH A 44 222 222 HOH HOH . F 5 HOH A 45 223 223 HOH HOH . F 5 HOH A 46 224 224 HOH HOH . F 5 HOH A 47 225 225 HOH HOH . F 5 HOH A 48 226 226 HOH HOH . F 5 HOH A 49 227 227 HOH HOH . F 5 HOH A 50 228 228 HOH HOH . F 5 HOH A 51 229 229 HOH HOH . F 5 HOH A 52 230 230 HOH HOH . F 5 HOH A 53 231 231 HOH HOH . F 5 HOH A 54 232 232 HOH HOH . F 5 HOH A 55 233 233 HOH HOH . F 5 HOH A 56 234 234 HOH HOH . F 5 HOH A 57 235 235 HOH HOH . F 5 HOH A 58 236 236 HOH HOH . F 5 HOH A 59 237 237 HOH HOH . F 5 HOH A 60 238 238 HOH HOH . F 5 HOH A 61 239 239 HOH HOH . F 5 HOH A 62 240 240 HOH HOH . F 5 HOH A 63 241 241 HOH HOH . F 5 HOH A 64 242 242 HOH HOH . F 5 HOH A 65 243 243 HOH HOH . F 5 HOH A 66 244 244 HOH HOH . F 5 HOH A 67 245 245 HOH HOH . F 5 HOH A 68 246 246 HOH HOH . F 5 HOH A 69 247 247 HOH HOH . F 5 HOH A 70 248 248 HOH HOH . F 5 HOH A 71 250 250 HOH HOH . F 5 HOH A 72 251 251 HOH HOH . F 5 HOH A 73 252 252 HOH HOH . F 5 HOH A 74 253 253 HOH HOH . F 5 HOH A 75 254 254 HOH HOH . F 5 HOH A 76 255 255 HOH HOH . F 5 HOH A 77 257 257 HOH HOH . F 5 HOH A 78 258 258 HOH HOH . F 5 HOH A 79 259 259 HOH HOH . F 5 HOH A 80 260 260 HOH HOH . F 5 HOH A 81 261 261 HOH HOH . F 5 HOH A 82 262 262 HOH HOH . F 5 HOH A 83 263 263 HOH HOH . F 5 HOH A 84 264 264 HOH HOH . F 5 HOH A 85 265 265 HOH HOH . F 5 HOH A 86 266 266 HOH HOH . F 5 HOH A 87 267 267 HOH HOH . F 5 HOH A 88 268 268 HOH HOH . F 5 HOH A 89 269 269 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 13.037 _atom_site.Cartn_y -12.197 _atom_site.Cartn_z -2.92 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 35.76 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 200 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 63 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #