data_3H6D
#
_model_server_result.job_id            TRRX6RpEkHu02mFulNpnVw 
_model_server_result.datetime_utc      '2024-11-17 03:30:33' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3h6d 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":203}' 
#
_entry.id    3H6D 
#
_exptl.entry_id    3H6D 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              122.143 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3H6D 
_cell.length_a            55.228 
_cell.length_b            55.228 
_cell.length_c            83.65 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3H6D 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        173 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 63' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? trimeric 3 author_defined_assembly 1 
PISA monomeric 1 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F 1 1,2,3 
A,B,C,D,E,F 2 1 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_545 -y,x-y-1,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 27.614 -47.828851 0 
3 'crystal symmetry operation' 3_655 -x+y+1,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 55.228 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 B MG MG . A MG 200 1_555 C O1B DUP . A DUP 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? 
metalc ? metalc2 B MG MG . A MG 200 1_555 C O1A DUP . A DUP 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? 
metalc ? metalc3 B MG MG . A MG 200 1_555 C O2G DUP . A DUP 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.13 ? 
#
_chem_comp.formula           'C4 H12 N O3 1' 
_chem_comp.formula_weight    122.143 
_chem_comp.id                TRS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'TRIS BUFFER' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C C1 TRS sing 338 n n 
C C2 TRS sing 339 n n 
C C3 TRS sing 340 n n 
C N TRS sing 341 n n 
C1 O1 TRS sing 342 n n 
C1 H11 TRS sing 343 n n 
C1 H12 TRS sing 344 n n 
C2 O2 TRS sing 345 n n 
C2 H21 TRS sing 346 n n 
C2 H22 TRS sing 347 n n 
C3 O3 TRS sing 348 n n 
C3 H31 TRS sing 349 n n 
C3 H32 TRS sing 350 n n 
N HN1 TRS sing 351 n n 
N HN2 TRS sing 352 n n 
N HN3 TRS sing 353 n n 
O1 HO1 TRS sing 354 n n 
O2 HO2 TRS sing 355 n n 
O3 HO3 TRS sing 356 n n 
#
_atom_sites.entry_id                     3H6D 
_atom_sites.fract_transf_matrix[1][1]    0.018107 
_atom_sites.fract_transf_matrix[1][2]    0.010454 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.020908 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011955 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MG A 1 200 200 MG MG . 
C 3 DUP A 1 201 201 DUP DUP . 
D 4 TRS A 1 202 202 TRS TRS . 
E 4 TRS A 1 203 203 TRS TRS . 
F 5 HOH A 1 175 175 HOH HOH . 
F 5 HOH A 2 176 176 HOH HOH . 
F 5 HOH A 3 177 177 HOH HOH . 
F 5 HOH A 4 178 178 HOH HOH . 
F 5 HOH A 5 179 179 HOH HOH . 
F 5 HOH A 6 180 180 HOH HOH . 
F 5 HOH A 7 181 181 HOH HOH . 
F 5 HOH A 8 182 182 HOH HOH . 
F 5 HOH A 9 183 183 HOH HOH . 
F 5 HOH A 10 184 184 HOH HOH . 
F 5 HOH A 11 185 185 HOH HOH . 
F 5 HOH A 12 186 186 HOH HOH . 
F 5 HOH A 13 187 187 HOH HOH . 
F 5 HOH A 14 188 188 HOH HOH . 
F 5 HOH A 15 189 189 HOH HOH . 
F 5 HOH A 16 190 190 HOH HOH . 
F 5 HOH A 17 191 191 HOH HOH . 
F 5 HOH A 18 192 192 HOH HOH . 
F 5 HOH A 19 193 193 HOH HOH . 
F 5 HOH A 20 194 194 HOH HOH . 
F 5 HOH A 21 195 195 HOH HOH . 
F 5 HOH A 22 196 196 HOH HOH . 
F 5 HOH A 23 197 197 HOH HOH . 
F 5 HOH A 24 198 198 HOH HOH . 
F 5 HOH A 25 199 199 HOH HOH . 
F 5 HOH A 26 204 204 HOH HOH . 
F 5 HOH A 27 205 205 HOH HOH . 
F 5 HOH A 28 206 206 HOH HOH . 
F 5 HOH A 29 207 207 HOH HOH . 
F 5 HOH A 30 208 208 HOH HOH . 
F 5 HOH A 31 209 209 HOH HOH . 
F 5 HOH A 32 210 210 HOH HOH . 
F 5 HOH A 33 211 211 HOH HOH . 
F 5 HOH A 34 212 212 HOH HOH . 
F 5 HOH A 35 213 213 HOH HOH . 
F 5 HOH A 36 214 214 HOH HOH . 
F 5 HOH A 37 215 215 HOH HOH . 
F 5 HOH A 38 216 216 HOH HOH . 
F 5 HOH A 39 217 217 HOH HOH . 
F 5 HOH A 40 218 218 HOH HOH . 
F 5 HOH A 41 219 219 HOH HOH . 
F 5 HOH A 42 220 220 HOH HOH . 
F 5 HOH A 43 221 221 HOH HOH . 
F 5 HOH A 44 222 222 HOH HOH . 
F 5 HOH A 45 223 223 HOH HOH . 
F 5 HOH A 46 224 224 HOH HOH . 
F 5 HOH A 47 225 225 HOH HOH . 
F 5 HOH A 48 226 226 HOH HOH . 
F 5 HOH A 49 227 227 HOH HOH . 
F 5 HOH A 50 228 228 HOH HOH . 
F 5 HOH A 51 229 229 HOH HOH . 
F 5 HOH A 52 230 230 HOH HOH . 
F 5 HOH A 53 231 231 HOH HOH . 
F 5 HOH A 54 232 232 HOH HOH . 
F 5 HOH A 55 233 233 HOH HOH . 
F 5 HOH A 56 234 234 HOH HOH . 
F 5 HOH A 57 235 235 HOH HOH . 
F 5 HOH A 58 236 236 HOH HOH . 
F 5 HOH A 59 237 237 HOH HOH . 
F 5 HOH A 60 238 238 HOH HOH . 
F 5 HOH A 61 239 239 HOH HOH . 
F 5 HOH A 62 240 240 HOH HOH . 
F 5 HOH A 63 241 241 HOH HOH . 
F 5 HOH A 64 242 242 HOH HOH . 
F 5 HOH A 65 243 243 HOH HOH . 
F 5 HOH A 66 244 244 HOH HOH . 
F 5 HOH A 67 245 245 HOH HOH . 
F 5 HOH A 68 246 246 HOH HOH . 
F 5 HOH A 69 247 247 HOH HOH . 
F 5 HOH A 70 248 248 HOH HOH . 
F 5 HOH A 71 250 250 HOH HOH . 
F 5 HOH A 72 251 251 HOH HOH . 
F 5 HOH A 73 252 252 HOH HOH . 
F 5 HOH A 74 253 253 HOH HOH . 
F 5 HOH A 75 254 254 HOH HOH . 
F 5 HOH A 76 255 255 HOH HOH . 
F 5 HOH A 77 257 257 HOH HOH . 
F 5 HOH A 78 258 258 HOH HOH . 
F 5 HOH A 79 259 259 HOH HOH . 
F 5 HOH A 80 260 260 HOH HOH . 
F 5 HOH A 81 261 261 HOH HOH . 
F 5 HOH A 82 262 262 HOH HOH . 
F 5 HOH A 83 263 263 HOH HOH . 
F 5 HOH A 84 264 264 HOH HOH . 
F 5 HOH A 85 265 265 HOH HOH . 
F 5 HOH A 86 266 266 HOH HOH . 
F 5 HOH A 87 267 267 HOH HOH . 
F 5 HOH A 88 268 268 HOH HOH . 
F 5 HOH A 89 269 269 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C TRS . . . E 4 27.542 15.927 -6.362 0.33 28.71 ? C TRS 203 A 1 
HETATM 2 C C1 TRS . . . E 4 28.6 16.915 -6.825 0.33 28.74 ? C1 TRS 203 A 1 
HETATM 3 C C2 TRS . . . E 4 26.178 16.347 -6.886 0.33 28.85 ? C2 TRS 203 A 1 
HETATM 4 C C3 TRS . . . E 4 27.885 14.539 -6.879 0.33 28.75 ? C3 TRS 203 A 1 
HETATM 5 N N TRS . . . E 4 27.515 15.902 -4.894 0.33 30.33 ? N TRS 203 A 1 
HETATM 6 O O1 TRS . . . E 4 29.867 16.352 -6.612 0.33 27.61 ? O1 TRS 203 A 1 
HETATM 7 O O2 TRS . . . E 4 25.88 17.636 -6.426 0.33 28.3 ? O2 TRS 203 A 1 
HETATM 8 O O3 TRS . . . E 4 26.884 13.64 -6.489 0.33 28.35 ? O3 TRS 203 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           282 
_model_server_stats.encode_time_ms          10 
_model_server_stats.element_count           8 
#