data_3H6G # _model_server_result.job_id EDeU_v5C1lZHKrEmFrQiTg _model_server_result.datetime_utc '2024-12-27 01:41:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3h6g # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":399}' # _entry.id 3H6G # _exptl.entry_id 3H6G _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.087 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'L(+)-TARTARIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3H6G _cell.length_a 172.074 _cell.length_b 172.074 _cell.length_c 111.547 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3H6G _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 H N N ? 3 M N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 65 A CYS 65 1_555 A SG CYS 316 A CYS 316 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? disulf ? disulf2 B SG CYS 65 B CYS 65 1_555 B SG CYS 316 B CYS 316 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? covale ? covale1 A ND2 ASN 36 A ASN 36 1_555 C C1 NAG . A NAG 396 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.436 ? covale ? covale2 A ND2 ASN 42 A ASN 42 1_555 D C1 NAG . A NAG 397 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.445 ? covale ? covale3 A ND2 ASN 244 A ASN 244 1_555 E C1 NAG . A NAG 398 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.435 ? covale ? covale4 A ND2 ASN 347 A ASN 347 1_555 F C1 NAG . A NAG 399 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? covale ? covale5 A ND2 ASN 381 A ASN 381 1_555 G C1 NAG . A NAG 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.429 ? covale ? covale6 B ND2 ASN 36 B ASN 36 1_555 J C1 NAG . B NAG 396 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.45 ? covale ? covale7 B ND2 ASN 244 B ASN 244 1_555 K C1 NAG . B NAG 397 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? covale ? covale8 B ND2 ASN 347 B ASN 347 1_555 L C1 NAG . B NAG 398 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.436 ? metalc ? metalc1 A O ILE 33 A ILE 33 1_555 I CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.529 ? metalc ? metalc2 A O ASN 34 A ASN 34 1_555 I CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.879 ? metalc ? metalc3 A O ASN 36 A ASN 36 1_555 I CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.589 ? metalc ? metalc4 A O LEU 39 A LEU 39 1_555 I CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.659 ? metalc ? metalc5 A O LEU 40 A LEU 40 1_555 I CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.54 ? metalc ? metalc6 B O ILE 33 B ILE 33 1_555 N CA CA . B CA 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.539 ? metalc ? metalc7 B O ASN 34 B ASN 34 1_555 N CA CA . B CA 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.891 ? metalc ? metalc8 B O ASN 36 B ASN 36 1_555 N CA CA . B CA 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.607 ? metalc ? metalc9 B O LEU 39 B LEU 39 1_555 N CA CA . B CA 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.615 ? metalc ? metalc10 B O LEU 40 B LEU 40 1_555 N CA CA . B CA 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.498 ? # _chem_comp.formula 'C4 H6 O6' _chem_comp.formula_weight 150.087 _chem_comp.id TLA _chem_comp.mon_nstd_flag . _chem_comp.name 'L(+)-TARTARIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 TLA doub 336 n n O11 C1 TLA sing 337 n n O11 H11 TLA sing 338 n n C1 C2 TLA sing 339 n n C2 O2 TLA sing 340 n n C2 C3 TLA sing 341 n n C2 H2 TLA sing 342 n n O2 HA TLA sing 343 n n C3 O3 TLA sing 344 n n C3 C4 TLA sing 345 n n C3 H3 TLA sing 346 n n O3 HB TLA sing 347 n n C4 O4 TLA doub 348 n n C4 O41 TLA sing 349 n n O41 H41 TLA sing 350 n n # _atom_sites.entry_id 3H6G _atom_sites.fract_transf_matrix[1][1] 0.005811 _atom_sites.fract_transf_matrix[1][2] 0.003355 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00671 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008965 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAG A 1 396 1 NAG NAG . D 2 NAG A 1 397 2 NAG NAG . E 2 NAG A 1 398 3 NAG NAG . F 2 NAG A 1 399 4 NAG NAG . G 2 NAG A 1 400 5 NAG NAG . H 3 TLA A 1 401 1 TLA TLA . I 4 CA A 1 402 1 CA CA . J 2 NAG B 1 396 6 NAG NAG . K 2 NAG B 1 397 8 NAG NAG . L 2 NAG B 1 398 9 NAG NAG . M 3 TLA B 1 399 2 TLA TLA . N 4 CA B 1 400 2 CA CA . O 5 HOH A 1 403 2 HOH HOH . O 5 HOH A 2 404 3 HOH HOH . O 5 HOH A 3 405 5 HOH HOH . O 5 HOH A 4 406 10 HOH HOH . O 5 HOH A 5 407 11 HOH HOH . O 5 HOH A 6 408 12 HOH HOH . O 5 HOH A 7 409 13 HOH HOH . O 5 HOH A 8 410 16 HOH HOH . O 5 HOH A 9 411 17 HOH HOH . O 5 HOH A 10 412 18 HOH HOH . O 5 HOH A 11 413 19 HOH HOH . O 5 HOH A 12 414 20 HOH HOH . O 5 HOH A 13 415 26 HOH HOH . O 5 HOH A 14 416 31 HOH HOH . O 5 HOH A 15 417 33 HOH HOH . O 5 HOH A 16 418 34 HOH HOH . O 5 HOH A 17 419 36 HOH HOH . O 5 HOH A 18 420 37 HOH HOH . O 5 HOH A 19 421 39 HOH HOH . O 5 HOH A 20 422 42 HOH HOH . O 5 HOH A 21 423 43 HOH HOH . O 5 HOH A 22 424 44 HOH HOH . P 5 HOH B 1 401 1 HOH HOH . P 5 HOH B 2 402 4 HOH HOH . P 5 HOH B 3 403 6 HOH HOH . P 5 HOH B 4 404 7 HOH HOH . P 5 HOH B 5 405 8 HOH HOH . P 5 HOH B 6 406 9 HOH HOH . P 5 HOH B 7 407 14 HOH HOH . P 5 HOH B 8 408 15 HOH HOH . P 5 HOH B 9 409 21 HOH HOH . P 5 HOH B 10 410 22 HOH HOH . P 5 HOH B 11 411 23 HOH HOH . P 5 HOH B 12 412 24 HOH HOH . P 5 HOH B 13 413 25 HOH HOH . P 5 HOH B 14 414 27 HOH HOH . P 5 HOH B 15 415 28 HOH HOH . P 5 HOH B 16 416 29 HOH HOH . P 5 HOH B 17 417 30 HOH HOH . P 5 HOH B 18 418 32 HOH HOH . P 5 HOH B 19 419 35 HOH HOH . P 5 HOH B 20 420 38 HOH HOH . P 5 HOH B 21 421 40 HOH HOH . P 5 HOH B 22 422 41 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 TLA . . . M 3 -59.006 34.588 -10.456 1 87.92 ? O1 TLA 399 B 1 HETATM 2 O O11 TLA . . . M 3 -57.5 34.382 -12.022 1 93.42 ? O11 TLA 399 B 1 HETATM 3 C C1 TLA . . . M 3 -57.732 34.774 -10.887 1 104.86 ? C1 TLA 399 B 1 HETATM 4 C C2 TLA . . . M 3 -57.064 35.981 -10.203 1 92.34 ? C2 TLA 399 B 1 HETATM 5 O O2 TLA . . . M 3 -57.335 35.964 -8.837 1 94.39 ? O2 TLA 399 B 1 HETATM 6 C C3 TLA . . . M 3 -57.888 37.154 -10.771 1 71.36 ? C3 TLA 399 B 1 HETATM 7 O O3 TLA . . . M 3 -57.643 37.173 -12.142 1 65.41 ? O3 TLA 399 B 1 HETATM 8 C C4 TLA . . . M 3 -57.54 38.474 -10.073 1 81.21 ? C4 TLA 399 B 1 HETATM 9 O O4 TLA . . . M 3 -58.573 39.29 -9.735 1 77.85 ? O4 TLA 399 B 1 HETATM 10 O O41 TLA . . . M 3 -56.651 38.528 -9.256 1 94.34 ? O41 TLA 399 B 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 214 _model_server_stats.encode_time_ms 14 _model_server_stats.element_count 10 #