data_3H6G
#
_model_server_result.job_id            z_rITPdAq7LrBQ2d-k2pFw 
_model_server_result.datetime_utc      '2024-12-27 02:22:52' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3h6g 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":402}' 
#
_entry.id    3H6G 
#
_exptl.entry_id    3H6G 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              40.078 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CALCIUM ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3H6G 
_cell.length_a            172.074 
_cell.length_b            172.074 
_cell.length_c            111.547 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3H6G 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        169 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 I N N 
? 4 N N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 65 A CYS 65 1_555 A SG CYS 316 A CYS 316 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? 
disulf ? disulf2 B SG CYS 65 B CYS 65 1_555 B SG CYS 316 B CYS 316 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? 
covale ? covale1 A ND2 ASN 36 A ASN 36 1_555 C C1 NAG . A NAG 396 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.436 ? 
covale ? covale2 A ND2 ASN 42 A ASN 42 1_555 D C1 NAG . A NAG 397 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.445 ? 
covale ? covale3 A ND2 ASN 244 A ASN 244 1_555 E C1 NAG . A NAG 398 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.435 ? 
covale ? covale4 A ND2 ASN 347 A ASN 347 1_555 F C1 NAG . A NAG 399 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? 
covale ? covale5 A ND2 ASN 381 A ASN 381 1_555 G C1 NAG . A NAG 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.429 ? 
covale ? covale6 B ND2 ASN 36 B ASN 36 1_555 J C1 NAG . B NAG 396 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.45 ? 
covale ? covale7 B ND2 ASN 244 B ASN 244 1_555 K C1 NAG . B NAG 397 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? 
covale ? covale8 B ND2 ASN 347 B ASN 347 1_555 L C1 NAG . B NAG 398 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.436 ? 
metalc ? metalc1 A O ILE 33 A ILE 33 1_555 I CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.529 ? 
metalc ? metalc2 A O ASN 34 A ASN 34 1_555 I CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.879 ? 
metalc ? metalc3 A O ASN 36 A ASN 36 1_555 I CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.589 ? 
metalc ? metalc4 A O LEU 39 A LEU 39 1_555 I CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.659 ? 
metalc ? metalc5 A O LEU 40 A LEU 40 1_555 I CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.54 ? 
metalc ? metalc6 B O ILE 33 B ILE 33 1_555 N CA CA . B CA 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.539 ? 
metalc ? metalc7 B O ASN 34 B ASN 34 1_555 N CA CA . B CA 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.891 ? 
metalc ? metalc8 B O ASN 36 B ASN 36 1_555 N CA CA . B CA 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.607 ? 
metalc ? metalc9 B O LEU 39 B LEU 39 1_555 N CA CA . B CA 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.615 ? 
metalc ? metalc10 B O LEU 40 B LEU 40 1_555 N CA CA . B CA 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.498 ? 
#
_chem_comp.formula           'Ca 2' 
_chem_comp.formula_weight    40.078 
_chem_comp.id                CA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CALCIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3H6G 
_atom_sites.fract_transf_matrix[1][1]    0.005811 
_atom_sites.fract_transf_matrix[1][2]    0.003355 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00671 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008965 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 NAG A 1 396 1 NAG NAG . 
D 2 NAG A 1 397 2 NAG NAG . 
E 2 NAG A 1 398 3 NAG NAG . 
F 2 NAG A 1 399 4 NAG NAG . 
G 2 NAG A 1 400 5 NAG NAG . 
H 3 TLA A 1 401 1 TLA TLA . 
I 4 CA A 1 402 1 CA CA . 
J 2 NAG B 1 396 6 NAG NAG . 
K 2 NAG B 1 397 8 NAG NAG . 
L 2 NAG B 1 398 9 NAG NAG . 
M 3 TLA B 1 399 2 TLA TLA . 
N 4 CA B 1 400 2 CA CA . 
O 5 HOH A 1 403 2 HOH HOH . 
O 5 HOH A 2 404 3 HOH HOH . 
O 5 HOH A 3 405 5 HOH HOH . 
O 5 HOH A 4 406 10 HOH HOH . 
O 5 HOH A 5 407 11 HOH HOH . 
O 5 HOH A 6 408 12 HOH HOH . 
O 5 HOH A 7 409 13 HOH HOH . 
O 5 HOH A 8 410 16 HOH HOH . 
O 5 HOH A 9 411 17 HOH HOH . 
O 5 HOH A 10 412 18 HOH HOH . 
O 5 HOH A 11 413 19 HOH HOH . 
O 5 HOH A 12 414 20 HOH HOH . 
O 5 HOH A 13 415 26 HOH HOH . 
O 5 HOH A 14 416 31 HOH HOH . 
O 5 HOH A 15 417 33 HOH HOH . 
O 5 HOH A 16 418 34 HOH HOH . 
O 5 HOH A 17 419 36 HOH HOH . 
O 5 HOH A 18 420 37 HOH HOH . 
O 5 HOH A 19 421 39 HOH HOH . 
O 5 HOH A 20 422 42 HOH HOH . 
O 5 HOH A 21 423 43 HOH HOH . 
O 5 HOH A 22 424 44 HOH HOH . 
P 5 HOH B 1 401 1 HOH HOH . 
P 5 HOH B 2 402 4 HOH HOH . 
P 5 HOH B 3 403 6 HOH HOH . 
P 5 HOH B 4 404 7 HOH HOH . 
P 5 HOH B 5 405 8 HOH HOH . 
P 5 HOH B 6 406 9 HOH HOH . 
P 5 HOH B 7 407 14 HOH HOH . 
P 5 HOH B 8 408 15 HOH HOH . 
P 5 HOH B 9 409 21 HOH HOH . 
P 5 HOH B 10 410 22 HOH HOH . 
P 5 HOH B 11 411 23 HOH HOH . 
P 5 HOH B 12 412 24 HOH HOH . 
P 5 HOH B 13 413 25 HOH HOH . 
P 5 HOH B 14 414 27 HOH HOH . 
P 5 HOH B 15 415 28 HOH HOH . 
P 5 HOH B 16 416 29 HOH HOH . 
P 5 HOH B 17 417 30 HOH HOH . 
P 5 HOH B 18 418 32 HOH HOH . 
P 5 HOH B 19 419 35 HOH HOH . 
P 5 HOH B 20 420 38 HOH HOH . 
P 5 HOH B 21 421 40 HOH HOH . 
P 5 HOH B 22 422 41 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CA 
_atom_site.label_atom_id         CA 
_atom_site.label_comp_id         CA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         I 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               -85.013 
_atom_site.Cartn_y               27.338 
_atom_site.Cartn_z               35.197 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        114.6 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CA 
_atom_site.auth_comp_id          CA 
_atom_site.auth_seq_id           402 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           310 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           1 
#