data_3H7J # _model_server_result.job_id SnDapqmwCouR3vm8eRiuxw _model_server_result.datetime_utc '2024-11-02 19:27:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3h7j # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":245}' # _entry.id 3H7J # _exptl.entry_id 3H7J _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.933 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COBALT (II) ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 97.92 _cell.angle_gamma 90 _cell.entry_id 3H7J _cell.length_a 45.99 _cell.length_b 118.493 _cell.length_c 46.926 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3H7J _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,K 1 1 B,H,I,J,L 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 H N N ? 2 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 33 A ASP 33 1_555 G FE FE . A FE 248 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.554 ? metalc ? metalc2 A OD2 ASP 33 A ASP 33 1_555 G FE FE . A FE 248 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? metalc ? metalc3 A NE2 HIS 50 A HIS 50 1_555 C CO CO . A CO 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.165 ? metalc ? metalc4 A NE2 HIS 52 A HIS 52 1_555 C CO CO . A CO 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.157 ? metalc ? metalc5 A OE1 GLN 56 A GLN 56 1_555 C CO CO . A CO 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.143 ? metalc ? metalc6 A NE2 HIS 91 A HIS 91 1_555 C CO CO . A CO 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? metalc ? metalc7 A OD1 ASN 155 A ASN 155 1_555 F FE FE . A FE 247 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.197 ? metalc ? metalc8 A NE2 HIS 162 A HIS 162 1_555 D CO CO . A CO 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.265 ? metalc ? metalc9 A NE2 HIS 164 A HIS 164 1_555 D CO CO . A CO 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.24 ? metalc ? metalc10 A OE2 GLU 167 A GLU 167 1_555 G FE FE . A FE 248 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.509 ? metalc ? metalc11 A OE1 GLN 168 A GLN 168 1_555 D CO CO . A CO 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.248 ? metalc ? metalc12 A OE2 GLU 197 A GLU 197 1_555 G FE FE . A FE 248 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.596 ? metalc ? metalc13 A NE2 HIS 202 A HIS 202 1_555 D CO CO . A CO 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? metalc ? metalc14 A OE1 GLU 209 A GLU 209 1_555 F FE FE . A FE 247 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.503 ? metalc ? metalc15 A OE2 GLU 209 A GLU 209 1_555 F FE FE . A FE 247 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.422 ? metalc ? metalc16 C CO CO . A CO 244 1_555 K O HOH . A HOH 251 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.206 ? metalc ? metalc17 C CO CO . A CO 244 1_555 K O HOH . A HOH 291 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? metalc ? metalc18 D CO CO . A CO 245 1_555 E O2 PPY . A PPY 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.849 ? metalc ? metalc19 D CO CO . A CO 245 1_555 E O3 PPY . A PPY 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.144 ? metalc ? metalc20 F FE FE . A FE 247 1_555 K O HOH . A HOH 289 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? metalc ? metalc21 F FE FE . A FE 247 1_555 K O HOH . A HOH 317 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.337 ? metalc ? metalc22 F FE FE . A FE 247 1_555 K O HOH . A HOH 357 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.428 ? metalc ? metalc23 G FE FE . A FE 248 1_555 K O HOH . A HOH 272 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.417 ? metalc ? metalc24 G FE FE . A FE 248 1_555 K O HOH . A HOH 299 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? metalc ? metalc25 G FE FE . A FE 248 1_555 K O HOH . A HOH 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.344 ? metalc ? metalc26 B NE2 HIS 50 B HIS 50 1_555 I CO CO . B CO 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.125 ? metalc ? metalc27 B NE2 HIS 52 B HIS 52 1_555 I CO CO . B CO 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.117 ? metalc ? metalc28 B OE1 GLN 56 B GLN 56 1_555 I CO CO . B CO 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? metalc ? metalc29 B NE2 HIS 91 B HIS 91 1_555 I CO CO . B CO 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.251 ? metalc ? metalc30 B NE2 HIS 162 B HIS 162 1_555 H CO CO . B CO 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.309 ? metalc ? metalc31 B NE2 HIS 164 B HIS 164 1_555 H CO CO . B CO 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.188 ? metalc ? metalc32 B OE1 GLN 168 B GLN 168 1_555 H CO CO . B CO 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.189 ? metalc ? metalc33 B NE2 HIS 202 B HIS 202 1_555 H CO CO . B CO 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.192 ? metalc ? metalc34 H CO CO . B CO 244 1_555 J O2 PPY . B PPY 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.241 ? metalc ? metalc35 H CO CO . B CO 244 1_555 J O3 PPY . B PPY 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.801 ? metalc ? metalc36 I CO CO . B CO 245 1_555 L O HOH . B HOH 295 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.223 ? metalc ? metalc37 I CO CO . B CO 245 1_555 L O HOH . B HOH 296 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.142 ? # _chem_comp.formula 'Co 2' _chem_comp.formula_weight 58.933 _chem_comp.id CO _chem_comp.mon_nstd_flag . _chem_comp.name 'COBALT (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3H7J _atom_sites.fract_transf_matrix[1][1] 0.021744 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003024 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008439 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021515 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CO A 1 244 236 CO CO . D 2 CO A 1 245 237 CO CO . E 3 PPY A 1 246 238 PPY PPY . F 4 FE A 1 247 239 FE FE . G 4 FE A 1 248 240 FE FE . H 2 CO B 1 244 236 CO CO . I 2 CO B 1 245 237 CO CO . J 3 PPY B 1 246 238 PPY PPY . K 5 HOH A 1 249 249 HOH HOH . K 5 HOH A 2 250 250 HOH HOH . K 5 HOH A 3 251 251 HOH HOH . K 5 HOH A 4 252 252 HOH HOH . K 5 HOH A 5 253 253 HOH HOH . K 5 HOH A 6 254 254 HOH HOH . K 5 HOH A 7 255 255 HOH HOH . K 5 HOH A 8 256 256 HOH HOH . K 5 HOH A 9 257 257 HOH HOH . K 5 HOH A 10 258 258 HOH HOH . K 5 HOH A 11 259 259 HOH HOH . K 5 HOH A 12 260 260 HOH HOH . K 5 HOH A 13 261 261 HOH HOH . K 5 HOH A 14 262 262 HOH HOH . K 5 HOH A 15 263 263 HOH HOH . K 5 HOH A 16 264 264 HOH HOH . K 5 HOH A 17 265 265 HOH HOH . K 5 HOH A 18 266 266 HOH HOH . K 5 HOH A 19 267 267 HOH HOH . K 5 HOH A 20 268 268 HOH HOH . K 5 HOH A 21 269 269 HOH HOH . K 5 HOH A 22 270 270 HOH HOH . K 5 HOH A 23 271 271 HOH HOH . K 5 HOH A 24 272 272 HOH HOH . K 5 HOH A 25 273 273 HOH HOH . K 5 HOH A 26 274 274 HOH HOH . K 5 HOH A 27 275 275 HOH HOH . K 5 HOH A 28 276 276 HOH HOH . K 5 HOH A 29 277 277 HOH HOH . K 5 HOH A 30 278 278 HOH HOH . K 5 HOH A 31 279 279 HOH HOH . K 5 HOH A 32 280 280 HOH HOH . K 5 HOH A 33 281 281 HOH HOH . K 5 HOH A 34 282 282 HOH HOH . K 5 HOH A 35 283 283 HOH HOH . K 5 HOH A 36 284 284 HOH HOH . K 5 HOH A 37 285 285 HOH HOH . K 5 HOH A 38 286 286 HOH HOH . K 5 HOH A 39 287 287 HOH HOH . K 5 HOH A 40 288 288 HOH HOH . K 5 HOH A 41 289 289 HOH HOH . K 5 HOH A 42 290 290 HOH HOH . K 5 HOH A 43 291 291 HOH HOH . K 5 HOH A 44 292 292 HOH HOH . K 5 HOH A 45 293 293 HOH HOH . K 5 HOH A 46 294 294 HOH HOH . K 5 HOH A 47 295 295 HOH HOH . K 5 HOH A 48 296 296 HOH HOH . K 5 HOH A 49 297 297 HOH HOH . K 5 HOH A 50 298 298 HOH HOH . K 5 HOH A 51 299 299 HOH HOH . K 5 HOH A 52 300 300 HOH HOH . K 5 HOH A 53 301 301 HOH HOH . K 5 HOH A 54 302 302 HOH HOH . K 5 HOH A 55 303 303 HOH HOH . K 5 HOH A 56 304 304 HOH HOH . K 5 HOH A 57 305 305 HOH HOH . K 5 HOH A 58 306 306 HOH HOH . K 5 HOH A 59 307 307 HOH HOH . K 5 HOH A 60 308 308 HOH HOH . K 5 HOH A 61 309 309 HOH HOH . K 5 HOH A 62 310 310 HOH HOH . K 5 HOH A 63 311 311 HOH HOH . K 5 HOH A 64 312 312 HOH HOH . K 5 HOH A 65 313 313 HOH HOH . K 5 HOH A 66 314 314 HOH HOH . K 5 HOH A 67 315 315 HOH HOH . K 5 HOH A 68 316 316 HOH HOH . K 5 HOH A 69 317 317 HOH HOH . K 5 HOH A 70 318 318 HOH HOH . K 5 HOH A 71 319 319 HOH HOH . K 5 HOH A 72 320 320 HOH HOH . K 5 HOH A 73 321 321 HOH HOH . K 5 HOH A 74 322 322 HOH HOH . K 5 HOH A 75 323 323 HOH HOH . K 5 HOH A 76 324 324 HOH HOH . K 5 HOH A 77 325 325 HOH HOH . K 5 HOH A 78 326 326 HOH HOH . K 5 HOH A 79 327 327 HOH HOH . K 5 HOH A 80 328 328 HOH HOH . K 5 HOH A 81 329 329 HOH HOH . K 5 HOH A 82 330 330 HOH HOH . K 5 HOH A 83 331 331 HOH HOH . K 5 HOH A 84 332 332 HOH HOH . K 5 HOH A 85 333 333 HOH HOH . K 5 HOH A 86 334 334 HOH HOH . K 5 HOH A 87 335 335 HOH HOH . K 5 HOH A 88 336 336 HOH HOH . K 5 HOH A 89 337 337 HOH HOH . K 5 HOH A 90 338 338 HOH HOH . K 5 HOH A 91 339 339 HOH HOH . K 5 HOH A 92 340 340 HOH HOH . K 5 HOH A 93 341 341 HOH HOH . K 5 HOH A 94 342 342 HOH HOH . K 5 HOH A 95 343 343 HOH HOH . K 5 HOH A 96 344 344 HOH HOH . K 5 HOH A 97 345 345 HOH HOH . K 5 HOH A 98 346 346 HOH HOH . K 5 HOH A 99 347 347 HOH HOH . K 5 HOH A 100 348 348 HOH HOH . K 5 HOH A 101 349 349 HOH HOH . K 5 HOH A 102 350 350 HOH HOH . K 5 HOH A 103 351 351 HOH HOH . K 5 HOH A 104 352 352 HOH HOH . K 5 HOH A 105 353 353 HOH HOH . K 5 HOH A 106 354 354 HOH HOH . K 5 HOH A 107 355 355 HOH HOH . K 5 HOH A 108 356 356 HOH HOH . K 5 HOH A 109 357 357 HOH HOH . K 5 HOH A 110 358 358 HOH HOH . K 5 HOH A 111 359 241 HOH HOH . K 5 HOH A 112 360 242 HOH HOH . K 5 HOH A 113 361 243 HOH HOH . K 5 HOH A 114 362 244 HOH HOH . K 5 HOH A 115 363 245 HOH HOH . K 5 HOH A 116 364 246 HOH HOH . K 5 HOH A 117 365 247 HOH HOH . K 5 HOH A 118 366 248 HOH HOH . L 5 HOH B 1 247 247 HOH HOH . L 5 HOH B 2 248 248 HOH HOH . L 5 HOH B 3 249 249 HOH HOH . L 5 HOH B 4 250 250 HOH HOH . L 5 HOH B 5 251 251 HOH HOH . L 5 HOH B 6 252 252 HOH HOH . L 5 HOH B 7 253 253 HOH HOH . L 5 HOH B 8 254 254 HOH HOH . L 5 HOH B 9 255 255 HOH HOH . L 5 HOH B 10 256 256 HOH HOH . L 5 HOH B 11 257 257 HOH HOH . L 5 HOH B 12 258 258 HOH HOH . L 5 HOH B 13 259 259 HOH HOH . L 5 HOH B 14 260 260 HOH HOH . L 5 HOH B 15 261 261 HOH HOH . L 5 HOH B 16 262 262 HOH HOH . L 5 HOH B 17 263 263 HOH HOH . L 5 HOH B 18 264 264 HOH HOH . L 5 HOH B 19 265 265 HOH HOH . L 5 HOH B 20 266 266 HOH HOH . L 5 HOH B 21 267 267 HOH HOH . L 5 HOH B 22 268 268 HOH HOH . L 5 HOH B 23 269 269 HOH HOH . L 5 HOH B 24 270 270 HOH HOH . L 5 HOH B 25 271 271 HOH HOH . L 5 HOH B 26 272 272 HOH HOH . L 5 HOH B 27 273 273 HOH HOH . L 5 HOH B 28 274 274 HOH HOH . L 5 HOH B 29 275 275 HOH HOH . L 5 HOH B 30 276 276 HOH HOH . L 5 HOH B 31 277 277 HOH HOH . L 5 HOH B 32 278 278 HOH HOH . L 5 HOH B 33 279 279 HOH HOH . L 5 HOH B 34 280 280 HOH HOH . L 5 HOH B 35 281 281 HOH HOH . L 5 HOH B 36 282 282 HOH HOH . L 5 HOH B 37 283 283 HOH HOH . L 5 HOH B 38 284 284 HOH HOH . L 5 HOH B 39 285 285 HOH HOH . L 5 HOH B 40 286 286 HOH HOH . L 5 HOH B 41 287 287 HOH HOH . L 5 HOH B 42 288 288 HOH HOH . L 5 HOH B 43 289 289 HOH HOH . L 5 HOH B 44 290 290 HOH HOH . L 5 HOH B 45 291 291 HOH HOH . L 5 HOH B 46 292 292 HOH HOH . L 5 HOH B 47 293 293 HOH HOH . L 5 HOH B 48 294 294 HOH HOH . L 5 HOH B 49 295 295 HOH HOH . L 5 HOH B 50 296 296 HOH HOH . L 5 HOH B 51 297 239 HOH HOH . L 5 HOH B 52 298 240 HOH HOH . L 5 HOH B 53 299 241 HOH HOH . L 5 HOH B 54 300 242 HOH HOH . L 5 HOH B 55 301 243 HOH HOH . L 5 HOH B 56 302 244 HOH HOH . L 5 HOH B 57 303 245 HOH HOH . L 5 HOH B 58 304 246 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CO _atom_site.label_atom_id CO _atom_site.label_comp_id CO _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x 16.159 _atom_site.Cartn_y -10.127 _atom_site.Cartn_z -12.251 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 17.28 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CO _atom_site.auth_comp_id CO _atom_site.auth_seq_id 245 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 324 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #