data_3H7Q # _model_server_result.job_id 2gkyeplPH5Het_cjXWOh-g _model_server_result.datetime_utc '2025-04-01 14:15:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3h7q # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":131}' # _entry.id 3H7Q # _exptl.entry_id 3H7Q _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 163.172 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description BICINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3H7Q _cell.length_a 68.81 _cell.length_b 68.81 _cell.length_c 86.84 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3H7Q _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H13 N O4' _chem_comp.formula_weight 163.172 _chem_comp.id BCN _chem_comp.mon_nstd_flag . _chem_comp.name BICINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C1 BCN sing 54 n n N1 C3 BCN sing 55 n n N1 C5 BCN sing 56 n n C1 C2 BCN sing 57 n n C1 H11 BCN sing 58 n n C1 H12 BCN sing 59 n n C2 O21 BCN doub 60 n n C2 O22 BCN sing 61 n n O22 HO2 BCN sing 62 n n C3 C4 BCN sing 63 n n C3 H31 BCN sing 64 n n C3 H32 BCN sing 65 n n C4 O4 BCN sing 66 n n C4 H41 BCN sing 67 n n C4 H42 BCN sing 68 n n O4 HO4 BCN sing 69 n n C5 C6 BCN sing 70 n n C5 H51 BCN sing 71 n n C5 H52 BCN sing 72 n n C6 O6 BCN sing 73 n n C6 H61 BCN sing 74 n n C6 H62 BCN sing 75 n n O6 HO6 BCN sing 76 n n # _atom_sites.entry_id 3H7Q _atom_sites.fract_transf_matrix[1][1] 0.014533 _atom_sites.fract_transf_matrix[1][2] 0.00839 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016781 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011515 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BCN A 1 131 0 BCN BCN . C 3 HOH A 1 132 1 HOH HOH . C 3 HOH A 2 133 2 HOH HOH . C 3 HOH A 3 134 3 HOH HOH . C 3 HOH A 4 135 5 HOH HOH . C 3 HOH A 5 136 6 HOH HOH . C 3 HOH A 6 137 7 HOH HOH . C 3 HOH A 7 138 8 HOH HOH . C 3 HOH A 8 139 9 HOH HOH . C 3 HOH A 9 140 10 HOH HOH . C 3 HOH A 10 141 11 HOH HOH . C 3 HOH A 11 142 12 HOH HOH . C 3 HOH A 12 143 13 HOH HOH . C 3 HOH A 13 144 14 HOH HOH . C 3 HOH A 14 145 15 HOH HOH . C 3 HOH A 15 146 16 HOH HOH . C 3 HOH A 16 147 17 HOH HOH . C 3 HOH A 17 148 20 HOH HOH . C 3 HOH A 18 149 21 HOH HOH . C 3 HOH A 19 150 22 HOH HOH . C 3 HOH A 20 151 23 HOH HOH . C 3 HOH A 21 152 25 HOH HOH . C 3 HOH A 22 153 26 HOH HOH . C 3 HOH A 23 154 31 HOH HOH . C 3 HOH A 24 155 33 HOH HOH . C 3 HOH A 25 156 34 HOH HOH . C 3 HOH A 26 157 36 HOH HOH . C 3 HOH A 27 158 37 HOH HOH . C 3 HOH A 28 159 39 HOH HOH . C 3 HOH A 29 160 40 HOH HOH . C 3 HOH A 30 161 42 HOH HOH . C 3 HOH A 31 162 44 HOH HOH . C 3 HOH A 32 163 47 HOH HOH . C 3 HOH A 33 164 48 HOH HOH . C 3 HOH A 34 165 49 HOH HOH . C 3 HOH A 35 166 51 HOH HOH . C 3 HOH A 36 167 52 HOH HOH . C 3 HOH A 37 168 55 HOH HOH . C 3 HOH A 38 169 56 HOH HOH . C 3 HOH A 39 170 57 HOH HOH . C 3 HOH A 40 171 59 HOH HOH . C 3 HOH A 41 172 61 HOH HOH . C 3 HOH A 42 173 64 HOH HOH . C 3 HOH A 43 174 66 HOH HOH . C 3 HOH A 44 175 79 HOH HOH . C 3 HOH A 45 176 80 HOH HOH . C 3 HOH A 46 177 83 HOH HOH . C 3 HOH A 47 178 85 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 BCN . . . B 2 -6.121 -11.717 23.374 1 45.51 ? N1 BCN 131 A 1 HETATM 2 C C1 BCN . . . B 2 -6.617 -10.862 24.444 1 53.82 ? C1 BCN 131 A 1 HETATM 3 C C2 BCN . . . B 2 -6.576 -9.353 24.197 1 40.36 ? C2 BCN 131 A 1 HETATM 4 O O21 BCN . . . B 2 -7.713 -8.757 23.623 1 41.03 ? O21 BCN 131 A 1 HETATM 5 O O22 BCN . . . B 2 -5.359 -8.863 23.7 1 44.67 ? O22 BCN 131 A 1 HETATM 6 C C3 BCN . . . B 2 -6.633 -11.202 22.12 1 49.46 ? C3 BCN 131 A 1 HETATM 7 C C4 BCN . . . B 2 -6.8 -12.242 21.013 1 60.96 ? C4 BCN 131 A 1 HETATM 8 O O4 BCN . . . B 2 -7.25 -11.914 19.965 1 60.03 ? O4 BCN 131 A 1 HETATM 9 C C5 BCN . . . B 2 -4.665 -11.721 23.342 1 42.02 ? C5 BCN 131 A 1 HETATM 10 C C6 BCN . . . B 2 -3.976 -11.067 24.541 1 43.45 ? C6 BCN 131 A 1 HETATM 11 O O6 BCN . . . B 2 -2.792 -10.979 24.558 1 47.63 ? O6 BCN 131 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 486 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 11 #