data_3H7Y
#
_model_server_result.job_id            a3pVUkXdZX6OIoTbienhbQ 
_model_server_result.datetime_utc      '2024-11-02 17:33:09' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3h7y 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":245}' 
#
_entry.id    3H7Y 
#
_exptl.entry_id    3H7Y 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              58.933 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'COBALT (II) ION' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3H7Y 
_cell.length_a            68.661 
_cell.length_b            68.661 
_cell.length_c            211.525 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3H7Y 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,J 1 1 
B,F,G,H,I,K 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 F N N 
? 2 G N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 50 A HIS 50 1_555 C CO CO . A CO 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.168 ? 
metalc ? metalc2 A NE2 HIS 52 A HIS 52 1_555 C CO CO . A CO 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.245 ? 
metalc ? metalc3 A OE1 GLN 56 A GLN 56 1_555 C CO CO . A CO 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.195 ? 
metalc ? metalc4 A NE2 HIS 91 A HIS 91 1_555 C CO CO . A CO 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.23 ? 
metalc ? metalc5 A NE2 HIS 162 A HIS 162 1_555 D CO CO . A CO 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.266 ? 
metalc ? metalc6 A NE2 HIS 164 A HIS 164 1_555 D CO CO . A CO 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.211 ? 
metalc ? metalc7 A OE1 GLN 168 A GLN 168 1_555 D CO CO . A CO 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.184 ? 
metalc ? metalc8 A NE2 HIS 202 A HIS 202 1_555 D CO CO . A CO 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.153 ? 
metalc ? metalc9 C CO CO . A CO 244 1_555 J O HOH . A HOH 327 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.203 ? 
metalc ? metalc10 C CO CO . A CO 244 1_555 J O HOH . A HOH 328 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? 
metalc ? metalc11 D CO CO . A CO 245 1_555 E O1 PPY . A PPY 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? 
metalc ? metalc12 D CO CO . A CO 245 1_555 E O3 PPY . A PPY 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? 
metalc ? metalc13 B NE2 HIS 50 B HIS 50 1_555 F CO CO . B CO 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.24 ? 
metalc ? metalc14 B NE2 HIS 52 B HIS 52 1_555 F CO CO . B CO 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.252 ? 
metalc ? metalc15 B OE1 GLN 56 B GLN 56 1_555 F CO CO . B CO 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? 
metalc ? metalc16 B NE2 HIS 91 B HIS 91 1_555 F CO CO . B CO 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.213 ? 
metalc ? metalc17 B O GLU 119 B GLU 119 1_555 I FE FE . B FE 247 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? 
metalc ? metalc18 B OE2 GLU 119 B GLU 119 1_555 I FE FE . B FE 247 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? 
metalc ? metalc19 B O PHE 122 B PHE 122 1_555 I FE FE . B FE 247 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? 
metalc ? metalc20 B NE2 HIS 162 B HIS 162 1_555 G CO CO . B CO 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.492 ? 
metalc ? metalc21 B NE2 HIS 164 B HIS 164 1_555 G CO CO . B CO 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.26 ? 
metalc ? metalc22 B OE1 GLN 168 B GLN 168 1_555 G CO CO . B CO 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.256 ? 
metalc ? metalc23 B NE2 HIS 202 B HIS 202 1_555 G CO CO . B CO 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.136 ? 
metalc ? metalc24 F CO CO . B CO 244 1_555 K O HOH . B HOH 267 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.597 ? 
metalc ? metalc25 F CO CO . B CO 244 1_555 K O HOH . B HOH 282 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? 
metalc ? metalc26 G CO CO . B CO 245 1_555 H O2 PPY . B PPY 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.886 ? 
metalc ? metalc27 G CO CO . B CO 245 1_555 H O3 PPY . B PPY 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.15 ? 
metalc ? metalc28 I FE FE . B FE 247 1_555 K O HOH . B HOH 296 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.247 ? 
#
_chem_comp.formula           'Co 2' 
_chem_comp.formula_weight    58.933 
_chem_comp.id                CO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'COBALT (II) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3H7Y 
_atom_sites.fract_transf_matrix[1][1]    0.014564 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014564 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004728 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 CO A 1 244 236 CO CO . 
D 2 CO A 1 245 237 CO CO . 
E 3 PPY A 1 246 238 PPY PPY . 
F 2 CO B 1 244 236 CO CO . 
G 2 CO B 1 245 237 CO CO . 
H 3 PPY B 1 246 238 PPY PPY . 
I 4 FE B 1 247 239 FE FE . 
J 5 HOH A 1 247 247 HOH HOH . 
J 5 HOH A 2 248 248 HOH HOH . 
J 5 HOH A 3 249 249 HOH HOH . 
J 5 HOH A 4 250 250 HOH HOH . 
J 5 HOH A 5 251 251 HOH HOH . 
J 5 HOH A 6 252 252 HOH HOH . 
J 5 HOH A 7 253 253 HOH HOH . 
J 5 HOH A 8 254 254 HOH HOH . 
J 5 HOH A 9 255 255 HOH HOH . 
J 5 HOH A 10 256 256 HOH HOH . 
J 5 HOH A 11 257 257 HOH HOH . 
J 5 HOH A 12 258 258 HOH HOH . 
J 5 HOH A 13 259 259 HOH HOH . 
J 5 HOH A 14 260 260 HOH HOH . 
J 5 HOH A 15 261 261 HOH HOH . 
J 5 HOH A 16 262 262 HOH HOH . 
J 5 HOH A 17 263 263 HOH HOH . 
J 5 HOH A 18 264 264 HOH HOH . 
J 5 HOH A 19 265 265 HOH HOH . 
J 5 HOH A 20 266 266 HOH HOH . 
J 5 HOH A 21 267 267 HOH HOH . 
J 5 HOH A 22 268 268 HOH HOH . 
J 5 HOH A 23 269 269 HOH HOH . 
J 5 HOH A 24 270 270 HOH HOH . 
J 5 HOH A 25 271 271 HOH HOH . 
J 5 HOH A 26 272 272 HOH HOH . 
J 5 HOH A 27 273 273 HOH HOH . 
J 5 HOH A 28 274 274 HOH HOH . 
J 5 HOH A 29 275 275 HOH HOH . 
J 5 HOH A 30 276 276 HOH HOH . 
J 5 HOH A 31 277 277 HOH HOH . 
J 5 HOH A 32 278 278 HOH HOH . 
J 5 HOH A 33 279 279 HOH HOH . 
J 5 HOH A 34 280 280 HOH HOH . 
J 5 HOH A 35 281 281 HOH HOH . 
J 5 HOH A 36 282 282 HOH HOH . 
J 5 HOH A 37 283 283 HOH HOH . 
J 5 HOH A 38 284 284 HOH HOH . 
J 5 HOH A 39 285 285 HOH HOH . 
J 5 HOH A 40 286 286 HOH HOH . 
J 5 HOH A 41 287 287 HOH HOH . 
J 5 HOH A 42 288 288 HOH HOH . 
J 5 HOH A 43 289 289 HOH HOH . 
J 5 HOH A 44 290 290 HOH HOH . 
J 5 HOH A 45 291 291 HOH HOH . 
J 5 HOH A 46 292 292 HOH HOH . 
J 5 HOH A 47 293 293 HOH HOH . 
J 5 HOH A 48 294 294 HOH HOH . 
J 5 HOH A 49 295 295 HOH HOH . 
J 5 HOH A 50 296 296 HOH HOH . 
J 5 HOH A 51 297 297 HOH HOH . 
J 5 HOH A 52 298 298 HOH HOH . 
J 5 HOH A 53 299 299 HOH HOH . 
J 5 HOH A 54 300 300 HOH HOH . 
J 5 HOH A 55 301 301 HOH HOH . 
J 5 HOH A 56 302 302 HOH HOH . 
J 5 HOH A 57 303 303 HOH HOH . 
J 5 HOH A 58 304 304 HOH HOH . 
J 5 HOH A 59 305 305 HOH HOH . 
J 5 HOH A 60 306 306 HOH HOH . 
J 5 HOH A 61 307 307 HOH HOH . 
J 5 HOH A 62 308 308 HOH HOH . 
J 5 HOH A 63 309 309 HOH HOH . 
J 5 HOH A 64 310 310 HOH HOH . 
J 5 HOH A 65 311 311 HOH HOH . 
J 5 HOH A 66 312 312 HOH HOH . 
J 5 HOH A 67 313 313 HOH HOH . 
J 5 HOH A 68 314 314 HOH HOH . 
J 5 HOH A 69 315 315 HOH HOH . 
J 5 HOH A 70 316 316 HOH HOH . 
J 5 HOH A 71 317 317 HOH HOH . 
J 5 HOH A 72 318 318 HOH HOH . 
J 5 HOH A 73 319 319 HOH HOH . 
J 5 HOH A 74 320 320 HOH HOH . 
J 5 HOH A 75 321 321 HOH HOH . 
J 5 HOH A 76 322 322 HOH HOH . 
J 5 HOH A 77 323 323 HOH HOH . 
J 5 HOH A 78 324 324 HOH HOH . 
J 5 HOH A 79 325 325 HOH HOH . 
J 5 HOH A 80 326 326 HOH HOH . 
J 5 HOH A 81 327 327 HOH HOH . 
J 5 HOH A 82 328 328 HOH HOH . 
J 5 HOH A 83 329 329 HOH HOH . 
J 5 HOH A 84 330 330 HOH HOH . 
J 5 HOH A 85 331 331 HOH HOH . 
J 5 HOH A 86 332 332 HOH HOH . 
J 5 HOH A 87 333 333 HOH HOH . 
J 5 HOH A 88 334 334 HOH HOH . 
J 5 HOH A 89 335 335 HOH HOH . 
J 5 HOH A 90 336 336 HOH HOH . 
J 5 HOH A 91 337 337 HOH HOH . 
J 5 HOH A 92 338 338 HOH HOH . 
J 5 HOH A 93 339 339 HOH HOH . 
J 5 HOH A 94 340 340 HOH HOH . 
J 5 HOH A 95 341 341 HOH HOH . 
J 5 HOH A 96 342 342 HOH HOH . 
J 5 HOH A 97 343 343 HOH HOH . 
J 5 HOH A 98 344 344 HOH HOH . 
J 5 HOH A 99 345 239 HOH HOH . 
J 5 HOH A 100 346 240 HOH HOH . 
J 5 HOH A 101 347 241 HOH HOH . 
J 5 HOH A 102 348 242 HOH HOH . 
J 5 HOH A 103 349 243 HOH HOH . 
J 5 HOH A 104 350 244 HOH HOH . 
J 5 HOH A 105 351 245 HOH HOH . 
J 5 HOH A 106 352 246 HOH HOH . 
K 5 HOH B 1 248 248 HOH HOH . 
K 5 HOH B 2 249 249 HOH HOH . 
K 5 HOH B 3 250 250 HOH HOH . 
K 5 HOH B 4 251 251 HOH HOH . 
K 5 HOH B 5 252 252 HOH HOH . 
K 5 HOH B 6 253 253 HOH HOH . 
K 5 HOH B 7 254 254 HOH HOH . 
K 5 HOH B 8 255 255 HOH HOH . 
K 5 HOH B 9 256 256 HOH HOH . 
K 5 HOH B 10 257 257 HOH HOH . 
K 5 HOH B 11 258 258 HOH HOH . 
K 5 HOH B 12 259 259 HOH HOH . 
K 5 HOH B 13 260 260 HOH HOH . 
K 5 HOH B 14 261 261 HOH HOH . 
K 5 HOH B 15 262 262 HOH HOH . 
K 5 HOH B 16 263 263 HOH HOH . 
K 5 HOH B 17 264 264 HOH HOH . 
K 5 HOH B 18 265 265 HOH HOH . 
K 5 HOH B 19 266 266 HOH HOH . 
K 5 HOH B 20 267 267 HOH HOH . 
K 5 HOH B 21 268 268 HOH HOH . 
K 5 HOH B 22 269 269 HOH HOH . 
K 5 HOH B 23 270 270 HOH HOH . 
K 5 HOH B 24 271 271 HOH HOH . 
K 5 HOH B 25 272 272 HOH HOH . 
K 5 HOH B 26 273 273 HOH HOH . 
K 5 HOH B 27 274 274 HOH HOH . 
K 5 HOH B 28 275 275 HOH HOH . 
K 5 HOH B 29 276 276 HOH HOH . 
K 5 HOH B 30 277 277 HOH HOH . 
K 5 HOH B 31 278 278 HOH HOH . 
K 5 HOH B 32 279 279 HOH HOH . 
K 5 HOH B 33 280 280 HOH HOH . 
K 5 HOH B 34 281 281 HOH HOH . 
K 5 HOH B 35 282 282 HOH HOH . 
K 5 HOH B 36 283 283 HOH HOH . 
K 5 HOH B 37 284 284 HOH HOH . 
K 5 HOH B 38 285 285 HOH HOH . 
K 5 HOH B 39 286 286 HOH HOH . 
K 5 HOH B 40 287 287 HOH HOH . 
K 5 HOH B 41 288 288 HOH HOH . 
K 5 HOH B 42 289 289 HOH HOH . 
K 5 HOH B 43 290 290 HOH HOH . 
K 5 HOH B 44 291 291 HOH HOH . 
K 5 HOH B 45 292 292 HOH HOH . 
K 5 HOH B 46 293 293 HOH HOH . 
K 5 HOH B 47 294 294 HOH HOH . 
K 5 HOH B 48 295 295 HOH HOH . 
K 5 HOH B 49 296 296 HOH HOH . 
K 5 HOH B 50 297 240 HOH HOH . 
K 5 HOH B 51 298 241 HOH HOH . 
K 5 HOH B 52 299 242 HOH HOH . 
K 5 HOH B 53 300 243 HOH HOH . 
K 5 HOH B 54 301 244 HOH HOH . 
K 5 HOH B 55 302 245 HOH HOH . 
K 5 HOH B 56 303 246 HOH HOH . 
K 5 HOH B 57 304 247 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CO 
_atom_site.label_atom_id         CO 
_atom_site.label_comp_id         CO 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               5.639 
_atom_site.Cartn_y               9.277 
_atom_site.Cartn_z               86.008 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        11.13 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CO 
_atom_site.auth_comp_id          CO 
_atom_site.auth_seq_id           245 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           288 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           1 
#