data_3H7Y # _model_server_result.job_id oqIrljrUKDrWzSp9W7qQdg _model_server_result.datetime_utc '2024-12-03 03:44:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3h7y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":247}' # _entry.id 3H7Y # _exptl.entry_id 3H7Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 55.845 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FE (III) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3H7Y _cell.length_a 68.661 _cell.length_b 68.661 _cell.length_c 211.525 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3H7Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,J 1 1 B,F,G,H,I,K 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id I _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 50 A HIS 50 1_555 C CO CO . A CO 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.168 ? metalc ? metalc2 A NE2 HIS 52 A HIS 52 1_555 C CO CO . A CO 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.245 ? metalc ? metalc3 A OE1 GLN 56 A GLN 56 1_555 C CO CO . A CO 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.195 ? metalc ? metalc4 A NE2 HIS 91 A HIS 91 1_555 C CO CO . A CO 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.23 ? metalc ? metalc5 A NE2 HIS 162 A HIS 162 1_555 D CO CO . A CO 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.266 ? metalc ? metalc6 A NE2 HIS 164 A HIS 164 1_555 D CO CO . A CO 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.211 ? metalc ? metalc7 A OE1 GLN 168 A GLN 168 1_555 D CO CO . A CO 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.184 ? metalc ? metalc8 A NE2 HIS 202 A HIS 202 1_555 D CO CO . A CO 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.153 ? metalc ? metalc9 C CO CO . A CO 244 1_555 J O HOH . A HOH 327 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.203 ? metalc ? metalc10 C CO CO . A CO 244 1_555 J O HOH . A HOH 328 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? metalc ? metalc11 D CO CO . A CO 245 1_555 E O1 PPY . A PPY 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? metalc ? metalc12 D CO CO . A CO 245 1_555 E O3 PPY . A PPY 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? metalc ? metalc13 B NE2 HIS 50 B HIS 50 1_555 F CO CO . B CO 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.24 ? metalc ? metalc14 B NE2 HIS 52 B HIS 52 1_555 F CO CO . B CO 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.252 ? metalc ? metalc15 B OE1 GLN 56 B GLN 56 1_555 F CO CO . B CO 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? metalc ? metalc16 B NE2 HIS 91 B HIS 91 1_555 F CO CO . B CO 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.213 ? metalc ? metalc17 B O GLU 119 B GLU 119 1_555 I FE FE . B FE 247 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? metalc ? metalc18 B OE2 GLU 119 B GLU 119 1_555 I FE FE . B FE 247 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? metalc ? metalc19 B O PHE 122 B PHE 122 1_555 I FE FE . B FE 247 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? metalc ? metalc20 B NE2 HIS 162 B HIS 162 1_555 G CO CO . B CO 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.492 ? metalc ? metalc21 B NE2 HIS 164 B HIS 164 1_555 G CO CO . B CO 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.26 ? metalc ? metalc22 B OE1 GLN 168 B GLN 168 1_555 G CO CO . B CO 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.256 ? metalc ? metalc23 B NE2 HIS 202 B HIS 202 1_555 G CO CO . B CO 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.136 ? metalc ? metalc24 F CO CO . B CO 244 1_555 K O HOH . B HOH 267 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.597 ? metalc ? metalc25 F CO CO . B CO 244 1_555 K O HOH . B HOH 282 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? metalc ? metalc26 G CO CO . B CO 245 1_555 H O2 PPY . B PPY 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.886 ? metalc ? metalc27 G CO CO . B CO 245 1_555 H O3 PPY . B PPY 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.15 ? metalc ? metalc28 I FE FE . B FE 247 1_555 K O HOH . B HOH 296 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.247 ? # _chem_comp.formula 'Fe 3' _chem_comp.formula_weight 55.845 _chem_comp.id FE _chem_comp.mon_nstd_flag . _chem_comp.name 'FE (III) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3H7Y _atom_sites.fract_transf_matrix[1][1] 0.014564 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014564 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004728 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CO A 1 244 236 CO CO . D 2 CO A 1 245 237 CO CO . E 3 PPY A 1 246 238 PPY PPY . F 2 CO B 1 244 236 CO CO . G 2 CO B 1 245 237 CO CO . H 3 PPY B 1 246 238 PPY PPY . I 4 FE B 1 247 239 FE FE . J 5 HOH A 1 247 247 HOH HOH . J 5 HOH A 2 248 248 HOH HOH . J 5 HOH A 3 249 249 HOH HOH . J 5 HOH A 4 250 250 HOH HOH . J 5 HOH A 5 251 251 HOH HOH . J 5 HOH A 6 252 252 HOH HOH . J 5 HOH A 7 253 253 HOH HOH . J 5 HOH A 8 254 254 HOH HOH . J 5 HOH A 9 255 255 HOH HOH . J 5 HOH A 10 256 256 HOH HOH . J 5 HOH A 11 257 257 HOH HOH . J 5 HOH A 12 258 258 HOH HOH . J 5 HOH A 13 259 259 HOH HOH . J 5 HOH A 14 260 260 HOH HOH . J 5 HOH A 15 261 261 HOH HOH . J 5 HOH A 16 262 262 HOH HOH . J 5 HOH A 17 263 263 HOH HOH . J 5 HOH A 18 264 264 HOH HOH . J 5 HOH A 19 265 265 HOH HOH . J 5 HOH A 20 266 266 HOH HOH . J 5 HOH A 21 267 267 HOH HOH . J 5 HOH A 22 268 268 HOH HOH . J 5 HOH A 23 269 269 HOH HOH . J 5 HOH A 24 270 270 HOH HOH . J 5 HOH A 25 271 271 HOH HOH . J 5 HOH A 26 272 272 HOH HOH . J 5 HOH A 27 273 273 HOH HOH . J 5 HOH A 28 274 274 HOH HOH . J 5 HOH A 29 275 275 HOH HOH . J 5 HOH A 30 276 276 HOH HOH . J 5 HOH A 31 277 277 HOH HOH . J 5 HOH A 32 278 278 HOH HOH . J 5 HOH A 33 279 279 HOH HOH . J 5 HOH A 34 280 280 HOH HOH . J 5 HOH A 35 281 281 HOH HOH . J 5 HOH A 36 282 282 HOH HOH . J 5 HOH A 37 283 283 HOH HOH . J 5 HOH A 38 284 284 HOH HOH . J 5 HOH A 39 285 285 HOH HOH . J 5 HOH A 40 286 286 HOH HOH . J 5 HOH A 41 287 287 HOH HOH . J 5 HOH A 42 288 288 HOH HOH . J 5 HOH A 43 289 289 HOH HOH . J 5 HOH A 44 290 290 HOH HOH . J 5 HOH A 45 291 291 HOH HOH . J 5 HOH A 46 292 292 HOH HOH . J 5 HOH A 47 293 293 HOH HOH . J 5 HOH A 48 294 294 HOH HOH . J 5 HOH A 49 295 295 HOH HOH . J 5 HOH A 50 296 296 HOH HOH . J 5 HOH A 51 297 297 HOH HOH . J 5 HOH A 52 298 298 HOH HOH . J 5 HOH A 53 299 299 HOH HOH . J 5 HOH A 54 300 300 HOH HOH . J 5 HOH A 55 301 301 HOH HOH . J 5 HOH A 56 302 302 HOH HOH . J 5 HOH A 57 303 303 HOH HOH . J 5 HOH A 58 304 304 HOH HOH . J 5 HOH A 59 305 305 HOH HOH . J 5 HOH A 60 306 306 HOH HOH . J 5 HOH A 61 307 307 HOH HOH . J 5 HOH A 62 308 308 HOH HOH . J 5 HOH A 63 309 309 HOH HOH . J 5 HOH A 64 310 310 HOH HOH . J 5 HOH A 65 311 311 HOH HOH . J 5 HOH A 66 312 312 HOH HOH . J 5 HOH A 67 313 313 HOH HOH . J 5 HOH A 68 314 314 HOH HOH . J 5 HOH A 69 315 315 HOH HOH . J 5 HOH A 70 316 316 HOH HOH . J 5 HOH A 71 317 317 HOH HOH . J 5 HOH A 72 318 318 HOH HOH . J 5 HOH A 73 319 319 HOH HOH . J 5 HOH A 74 320 320 HOH HOH . J 5 HOH A 75 321 321 HOH HOH . J 5 HOH A 76 322 322 HOH HOH . J 5 HOH A 77 323 323 HOH HOH . J 5 HOH A 78 324 324 HOH HOH . J 5 HOH A 79 325 325 HOH HOH . J 5 HOH A 80 326 326 HOH HOH . J 5 HOH A 81 327 327 HOH HOH . J 5 HOH A 82 328 328 HOH HOH . J 5 HOH A 83 329 329 HOH HOH . J 5 HOH A 84 330 330 HOH HOH . J 5 HOH A 85 331 331 HOH HOH . J 5 HOH A 86 332 332 HOH HOH . J 5 HOH A 87 333 333 HOH HOH . J 5 HOH A 88 334 334 HOH HOH . J 5 HOH A 89 335 335 HOH HOH . J 5 HOH A 90 336 336 HOH HOH . J 5 HOH A 91 337 337 HOH HOH . J 5 HOH A 92 338 338 HOH HOH . J 5 HOH A 93 339 339 HOH HOH . J 5 HOH A 94 340 340 HOH HOH . J 5 HOH A 95 341 341 HOH HOH . J 5 HOH A 96 342 342 HOH HOH . J 5 HOH A 97 343 343 HOH HOH . J 5 HOH A 98 344 344 HOH HOH . J 5 HOH A 99 345 239 HOH HOH . J 5 HOH A 100 346 240 HOH HOH . J 5 HOH A 101 347 241 HOH HOH . J 5 HOH A 102 348 242 HOH HOH . J 5 HOH A 103 349 243 HOH HOH . J 5 HOH A 104 350 244 HOH HOH . J 5 HOH A 105 351 245 HOH HOH . J 5 HOH A 106 352 246 HOH HOH . K 5 HOH B 1 248 248 HOH HOH . K 5 HOH B 2 249 249 HOH HOH . K 5 HOH B 3 250 250 HOH HOH . K 5 HOH B 4 251 251 HOH HOH . K 5 HOH B 5 252 252 HOH HOH . K 5 HOH B 6 253 253 HOH HOH . K 5 HOH B 7 254 254 HOH HOH . K 5 HOH B 8 255 255 HOH HOH . K 5 HOH B 9 256 256 HOH HOH . K 5 HOH B 10 257 257 HOH HOH . K 5 HOH B 11 258 258 HOH HOH . K 5 HOH B 12 259 259 HOH HOH . K 5 HOH B 13 260 260 HOH HOH . K 5 HOH B 14 261 261 HOH HOH . K 5 HOH B 15 262 262 HOH HOH . K 5 HOH B 16 263 263 HOH HOH . K 5 HOH B 17 264 264 HOH HOH . K 5 HOH B 18 265 265 HOH HOH . K 5 HOH B 19 266 266 HOH HOH . K 5 HOH B 20 267 267 HOH HOH . K 5 HOH B 21 268 268 HOH HOH . K 5 HOH B 22 269 269 HOH HOH . K 5 HOH B 23 270 270 HOH HOH . K 5 HOH B 24 271 271 HOH HOH . K 5 HOH B 25 272 272 HOH HOH . K 5 HOH B 26 273 273 HOH HOH . K 5 HOH B 27 274 274 HOH HOH . K 5 HOH B 28 275 275 HOH HOH . K 5 HOH B 29 276 276 HOH HOH . K 5 HOH B 30 277 277 HOH HOH . K 5 HOH B 31 278 278 HOH HOH . K 5 HOH B 32 279 279 HOH HOH . K 5 HOH B 33 280 280 HOH HOH . K 5 HOH B 34 281 281 HOH HOH . K 5 HOH B 35 282 282 HOH HOH . K 5 HOH B 36 283 283 HOH HOH . K 5 HOH B 37 284 284 HOH HOH . K 5 HOH B 38 285 285 HOH HOH . K 5 HOH B 39 286 286 HOH HOH . K 5 HOH B 40 287 287 HOH HOH . K 5 HOH B 41 288 288 HOH HOH . K 5 HOH B 42 289 289 HOH HOH . K 5 HOH B 43 290 290 HOH HOH . K 5 HOH B 44 291 291 HOH HOH . K 5 HOH B 45 292 292 HOH HOH . K 5 HOH B 46 293 293 HOH HOH . K 5 HOH B 47 294 294 HOH HOH . K 5 HOH B 48 295 295 HOH HOH . K 5 HOH B 49 296 296 HOH HOH . K 5 HOH B 50 297 240 HOH HOH . K 5 HOH B 51 298 241 HOH HOH . K 5 HOH B 52 299 242 HOH HOH . K 5 HOH B 53 300 243 HOH HOH . K 5 HOH B 54 301 244 HOH HOH . K 5 HOH B 55 302 245 HOH HOH . K 5 HOH B 56 303 246 HOH HOH . K 5 HOH B 57 304 247 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol FE _atom_site.label_atom_id FE _atom_site.label_comp_id FE _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id I _atom_site.label_entity_id 4 _atom_site.Cartn_x -5.301 _atom_site.Cartn_y 43.094 _atom_site.Cartn_z 54.401 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 21.18 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id FE _atom_site.auth_comp_id FE _atom_site.auth_seq_id 247 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 65 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 334 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #