data_3H80
#
_model_server_result.job_id            Ipy0osewNeEe52YFj1tzjQ 
_model_server_result.datetime_utc      '2024-11-27 02:55:26' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3h80 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":215}' 
#
_entry.id    3H80 
#
_exptl.entry_id    3H80 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    7 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3H80 
_cell.length_a            122.431 
_cell.length_b            43.197 
_cell.length_c            50.502 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3H80 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_565 -x,-y+1,z -1 0 0 0 -1 0 0 0 1 0 43.197 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 E N N 
? 3 F N N 
? 3 G N N 
? 3 H N N 
? 3 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD1 ASN 54 A ASN 36 1_555 B MG MG . A MG 214 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.122 ? 
metalc ? metalc2 A OG SER 177 A SER 159 1_555 J MG MG . A MG 222 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.285 ? 
metalc ? metalc3 B MG MG . A MG 214 1_555 K O1A ANP . A ANP 223 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.207 ? 
metalc ? metalc4 B MG MG . A MG 214 1_555 K O2G ANP . A ANP 223 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.976 ? 
metalc ? metalc5 B MG MG . A MG 214 1_555 K O2B ANP . A ANP 223 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
metalc ? metalc6 B MG MG . A MG 214 1_555 L O HOH . A HOH 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.249 ? 
metalc ? metalc7 B MG MG . A MG 214 1_555 L O HOH . A HOH 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 133 n n 
C1 C2 EDO sing 134 n n 
C1 H11 EDO sing 135 n n 
C1 H12 EDO sing 136 n n 
O1 HO1 EDO sing 137 n n 
C2 O2 EDO sing 138 n n 
C2 H21 EDO sing 139 n n 
C2 H22 EDO sing 140 n n 
O2 HO2 EDO sing 141 n n 
#
_atom_sites.entry_id                     3H80 
_atom_sites.fract_transf_matrix[1][1]    0.008168 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.02315 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.019801 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MG A 1 214 1 MG MG . 
C 3 EDO A 1 215 1 EDO EDO . 
D 3 EDO A 1 216 1 EDO EDO . 
E 3 EDO A 1 217 1 EDO EDO . 
F 3 EDO A 1 218 1 EDO EDO . 
G 3 EDO A 1 219 1 EDO EDO . 
H 3 EDO A 1 220 1 EDO EDO . 
I 3 EDO A 1 221 1 EDO EDO . 
J 2 MG A 1 222 1 MG MG . 
K 4 ANP A 1 223 1 ANP ANP . 
L 5 HOH A 1 224 1 HOH HOH . 
L 5 HOH A 2 225 2 HOH HOH . 
L 5 HOH A 3 226 4 HOH HOH . 
L 5 HOH A 4 227 5 HOH HOH . 
L 5 HOH A 5 228 6 HOH HOH . 
L 5 HOH A 6 229 8 HOH HOH . 
L 5 HOH A 7 230 9 HOH HOH . 
L 5 HOH A 8 231 10 HOH HOH . 
L 5 HOH A 9 232 11 HOH HOH . 
L 5 HOH A 10 233 13 HOH HOH . 
L 5 HOH A 11 234 14 HOH HOH . 
L 5 HOH A 12 235 16 HOH HOH . 
L 5 HOH A 13 236 18 HOH HOH . 
L 5 HOH A 14 237 19 HOH HOH . 
L 5 HOH A 15 238 20 HOH HOH . 
L 5 HOH A 16 239 21 HOH HOH . 
L 5 HOH A 17 240 22 HOH HOH . 
L 5 HOH A 18 241 23 HOH HOH . 
L 5 HOH A 19 242 24 HOH HOH . 
L 5 HOH A 20 243 25 HOH HOH . 
L 5 HOH A 21 244 26 HOH HOH . 
L 5 HOH A 22 245 27 HOH HOH . 
L 5 HOH A 23 246 30 HOH HOH . 
L 5 HOH A 24 247 31 HOH HOH . 
L 5 HOH A 25 248 33 HOH HOH . 
L 5 HOH A 26 249 34 HOH HOH . 
L 5 HOH A 27 250 35 HOH HOH . 
L 5 HOH A 28 251 36 HOH HOH . 
L 5 HOH A 29 252 37 HOH HOH . 
L 5 HOH A 30 253 38 HOH HOH . 
L 5 HOH A 31 254 39 HOH HOH . 
L 5 HOH A 32 255 40 HOH HOH . 
L 5 HOH A 33 256 41 HOH HOH . 
L 5 HOH A 34 257 42 HOH HOH . 
L 5 HOH A 35 258 43 HOH HOH . 
L 5 HOH A 36 259 44 HOH HOH . 
L 5 HOH A 37 260 45 HOH HOH . 
L 5 HOH A 38 261 46 HOH HOH . 
L 5 HOH A 39 262 49 HOH HOH . 
L 5 HOH A 40 263 51 HOH HOH . 
L 5 HOH A 41 264 52 HOH HOH . 
L 5 HOH A 42 265 53 HOH HOH . 
L 5 HOH A 43 266 54 HOH HOH . 
L 5 HOH A 44 267 56 HOH HOH . 
L 5 HOH A 45 268 58 HOH HOH . 
L 5 HOH A 46 269 59 HOH HOH . 
L 5 HOH A 47 270 61 HOH HOH . 
L 5 HOH A 48 271 62 HOH HOH . 
L 5 HOH A 49 272 63 HOH HOH . 
L 5 HOH A 50 273 64 HOH HOH . 
L 5 HOH A 51 274 65 HOH HOH . 
L 5 HOH A 52 275 66 HOH HOH . 
L 5 HOH A 53 276 67 HOH HOH . 
L 5 HOH A 54 277 69 HOH HOH . 
L 5 HOH A 55 278 71 HOH HOH . 
L 5 HOH A 56 279 72 HOH HOH . 
L 5 HOH A 57 280 75 HOH HOH . 
L 5 HOH A 58 281 76 HOH HOH . 
L 5 HOH A 59 282 78 HOH HOH . 
L 5 HOH A 60 283 80 HOH HOH . 
L 5 HOH A 61 284 82 HOH HOH . 
L 5 HOH A 62 285 90 HOH HOH . 
L 5 HOH A 63 286 92 HOH HOH . 
L 5 HOH A 64 287 93 HOH HOH . 
L 5 HOH A 65 288 95 HOH HOH . 
L 5 HOH A 66 289 100 HOH HOH . 
L 5 HOH A 67 290 101 HOH HOH . 
L 5 HOH A 68 291 112 HOH HOH . 
L 5 HOH A 69 292 114 HOH HOH . 
L 5 HOH A 70 293 116 HOH HOH . 
L 5 HOH A 71 294 117 HOH HOH . 
L 5 HOH A 72 295 124 HOH HOH . 
L 5 HOH A 73 296 128 HOH HOH . 
L 5 HOH A 74 297 129 HOH HOH . 
L 5 HOH A 75 298 131 HOH HOH . 
L 5 HOH A 76 299 133 HOH HOH . 
L 5 HOH A 77 300 135 HOH HOH . 
L 5 HOH A 78 301 136 HOH HOH . 
L 5 HOH A 79 302 137 HOH HOH . 
L 5 HOH A 80 303 138 HOH HOH . 
L 5 HOH A 81 304 139 HOH HOH . 
L 5 HOH A 82 305 140 HOH HOH . 
L 5 HOH A 83 306 141 HOH HOH . 
L 5 HOH A 84 307 142 HOH HOH . 
L 5 HOH A 85 308 144 HOH HOH . 
L 5 HOH A 86 309 145 HOH HOH . 
L 5 HOH A 87 310 146 HOH HOH . 
L 5 HOH A 88 311 149 HOH HOH . 
L 5 HOH A 89 312 153 HOH HOH . 
L 5 HOH A 90 313 154 HOH HOH . 
L 5 HOH A 91 314 155 HOH HOH . 
L 5 HOH A 92 315 156 HOH HOH . 
L 5 HOH A 93 316 157 HOH HOH . 
L 5 HOH A 94 317 158 HOH HOH . 
L 5 HOH A 95 318 159 HOH HOH . 
L 5 HOH A 96 319 160 HOH HOH . 
L 5 HOH A 97 320 161 HOH HOH . 
L 5 HOH A 98 321 162 HOH HOH . 
L 5 HOH A 99 322 163 HOH HOH . 
L 5 HOH A 100 323 164 HOH HOH . 
L 5 HOH A 101 324 165 HOH HOH . 
L 5 HOH A 102 325 166 HOH HOH . 
L 5 HOH A 103 326 168 HOH HOH . 
L 5 HOH A 104 327 169 HOH HOH . 
L 5 HOH A 105 328 170 HOH HOH . 
L 5 HOH A 106 329 172 HOH HOH . 
L 5 HOH A 107 330 173 HOH HOH . 
L 5 HOH A 108 331 174 HOH HOH . 
L 5 HOH A 109 332 175 HOH HOH . 
L 5 HOH A 110 333 176 HOH HOH . 
L 5 HOH A 111 334 177 HOH HOH . 
L 5 HOH A 112 335 179 HOH HOH . 
L 5 HOH A 113 336 180 HOH HOH . 
L 5 HOH A 114 337 181 HOH HOH . 
L 5 HOH A 115 338 182 HOH HOH . 
L 5 HOH A 116 339 183 HOH HOH . 
L 5 HOH A 117 340 184 HOH HOH . 
L 5 HOH A 118 341 185 HOH HOH . 
L 5 HOH A 119 342 186 HOH HOH . 
L 5 HOH A 120 343 187 HOH HOH . 
L 5 HOH A 121 344 188 HOH HOH . 
L 5 HOH A 122 345 189 HOH HOH . 
L 5 HOH A 123 346 190 HOH HOH . 
L 5 HOH A 124 347 192 HOH HOH . 
L 5 HOH A 125 348 193 HOH HOH . 
L 5 HOH A 126 349 194 HOH HOH . 
L 5 HOH A 127 350 196 HOH HOH . 
L 5 HOH A 128 351 197 HOH HOH . 
L 5 HOH A 129 352 198 HOH HOH . 
L 5 HOH A 130 353 3 HOH HOH . 
L 5 HOH A 131 354 4 HOH HOH . 
L 5 HOH A 132 355 9 HOH HOH . 
L 5 HOH A 133 356 10 HOH HOH . 
L 5 HOH A 134 357 12 HOH HOH . 
L 5 HOH A 135 358 17 HOH HOH . 
L 5 HOH A 136 359 20 HOH HOH . 
L 5 HOH A 137 360 23 HOH HOH . 
L 5 HOH A 138 361 27 HOH HOH . 
L 5 HOH A 139 362 29 HOH HOH . 
L 5 HOH A 140 363 30 HOH HOH . 
L 5 HOH A 141 364 41 HOH HOH . 
L 5 HOH A 142 365 47 HOH HOH . 
L 5 HOH A 143 366 48 HOH HOH . 
L 5 HOH A 144 367 54 HOH HOH . 
L 5 HOH A 145 368 62 HOH HOH . 
L 5 HOH A 146 369 69 HOH HOH . 
L 5 HOH A 147 370 73 HOH HOH . 
L 5 HOH A 148 371 88 HOH HOH . 
L 5 HOH A 149 372 106 HOH HOH . 
L 5 HOH A 150 373 113 HOH HOH . 
L 5 HOH A 151 374 114 HOH HOH . 
L 5 HOH A 152 375 115 HOH HOH . 
L 5 HOH A 153 376 116 HOH HOH . 
L 5 HOH A 154 377 119 HOH HOH . 
L 5 HOH A 155 378 123 HOH HOH . 
L 5 HOH A 156 379 124 HOH HOH . 
L 5 HOH A 157 380 126 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . C 3 18.441 9.947 26.522 1 32.76 ? C1 EDO 215 A 1 
HETATM 2 O O1 EDO . . . C 3 18.402 10.804 25.362 1 29.52 ? O1 EDO 215 A 1 
HETATM 3 C C2 EDO . . . C 3 18.265 8.488 26.108 1 31.91 ? C2 EDO 215 A 1 
HETATM 4 O O2 EDO . . . C 3 19.182 8.212 25.031 1 28.28 ? O2 EDO 215 A 1 
#
_model_server_stats.io_time_ms              15 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           254 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           4 
#