data_3H8H
#
_model_server_result.job_id            sKXCkkEH06T0h1rmwZUgTg 
_model_server_result.datetime_utc      '2025-01-31 17:41:58' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3h8h 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":501}' 
#
_entry.id    3H8H 
#
_exptl.entry_id    3H8H 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              414.488 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NONAETHYLENE GLYCOL' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3H8H 
_cell.length_a            72.169 
_cell.length_b            72.169 
_cell.length_c            90.966 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3H8H 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        179 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 65 2 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
PISA dimeric 2 software_defined_assembly 2 
PISA dimeric 2 software_defined_assembly 3 
PISA dimeric 2 software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F 1 1 
A,B,C,D,E,F 2 1,2 
A,B,C,D,E,F 3 1,2 
A,B,C,D,E,F 4 1,3 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 10_665 -y+1,-x+1,-z+1/6 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 36.0845 62.500187 15.161 
3 'crystal symmetry operation' 12_554 x,x-y,-z-1/6 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 0 0 -15.161 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C18 H38 O10' 
_chem_comp.formula_weight    414.488 
_chem_comp.id                2PE 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NONAETHYLENE GLYCOL' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O1 C2 2PE sing 1 n n 
O1 HO1 2PE sing 2 n n 
C2 C3 2PE sing 3 n n 
C2 H21 2PE sing 4 n n 
C2 H22 2PE sing 5 n n 
C3 O4 2PE sing 6 n n 
C3 H31 2PE sing 7 n n 
C3 H32 2PE sing 8 n n 
O4 C5 2PE sing 9 n n 
C5 C6 2PE sing 10 n n 
C5 H51 2PE sing 11 n n 
C5 H52 2PE sing 12 n n 
C6 O7 2PE sing 13 n n 
C6 H61 2PE sing 14 n n 
C6 H62 2PE sing 15 n n 
O7 C8 2PE sing 16 n n 
C8 C9 2PE sing 17 n n 
C8 H81 2PE sing 18 n n 
C8 H82 2PE sing 19 n n 
C9 O10 2PE sing 20 n n 
C9 H91 2PE sing 21 n n 
C9 H92 2PE sing 22 n n 
O10 C11 2PE sing 23 n n 
C11 C12 2PE sing 24 n n 
C11 H111 2PE sing 25 n n 
C11 H112 2PE sing 26 n n 
C12 O13 2PE sing 27 n n 
C12 H121 2PE sing 28 n n 
C12 H122 2PE sing 29 n n 
O13 C14 2PE sing 30 n n 
C14 C15 2PE sing 31 n n 
C14 H141 2PE sing 32 n n 
C14 H142 2PE sing 33 n n 
C15 O16 2PE sing 34 n n 
C15 H151 2PE sing 35 n n 
C15 H152 2PE sing 36 n n 
O16 C17 2PE sing 37 n n 
C17 C18 2PE sing 38 n n 
C17 H171 2PE sing 39 n n 
C17 H172 2PE sing 40 n n 
C18 O19 2PE sing 41 n n 
C18 H181 2PE sing 42 n n 
C18 H182 2PE sing 43 n n 
O19 C20 2PE sing 44 n n 
C20 C21 2PE sing 45 n n 
C20 H201 2PE sing 46 n n 
C20 H202 2PE sing 47 n n 
C21 O22 2PE sing 48 n n 
C21 H211 2PE sing 49 n n 
C21 H212 2PE sing 50 n n 
O22 C23 2PE sing 51 n n 
C23 C24 2PE sing 52 n n 
C23 H231 2PE sing 53 n n 
C23 H232 2PE sing 54 n n 
C24 O25 2PE sing 55 n n 
C24 H241 2PE sing 56 n n 
C24 H242 2PE sing 57 n n 
O25 C26 2PE sing 58 n n 
C26 C27 2PE sing 59 n n 
C26 H261 2PE sing 60 n n 
C26 H262 2PE sing 61 n n 
C27 O28 2PE sing 62 n n 
C27 H271 2PE sing 63 n n 
C27 H272 2PE sing 64 n n 
O28 HO2 2PE sing 65 n n 
#
_atom_sites.entry_id                     3H8H 
_atom_sites.fract_transf_matrix[1][1]    0.013856 
_atom_sites.fract_transf_matrix[1][2]    0.008 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010993 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 2PE A 1 501 501 2PE 2PE . 
C 3 GOL A 1 502 502 GOL GOL . 
D 4 SO4 A 1 503 503 SO4 SO4 . 
E 5 CL A 1 504 504 CL CL . 
F 6 HOH A 1 505 505 HOH HOH . 
F 6 HOH A 2 506 506 HOH HOH . 
F 6 HOH A 3 507 507 HOH HOH . 
F 6 HOH A 4 508 508 HOH HOH . 
F 6 HOH A 5 509 509 HOH HOH . 
F 6 HOH A 6 510 510 HOH HOH . 
F 6 HOH A 7 511 511 HOH HOH . 
F 6 HOH A 8 512 512 HOH HOH . 
F 6 HOH A 9 513 513 HOH HOH . 
F 6 HOH A 10 514 514 HOH HOH . 
F 6 HOH A 11 515 515 HOH HOH . 
F 6 HOH A 12 516 516 HOH HOH . 
F 6 HOH A 13 517 517 HOH HOH . 
F 6 HOH A 14 518 518 HOH HOH . 
F 6 HOH A 15 519 519 HOH HOH . 
F 6 HOH A 16 520 520 HOH HOH . 
F 6 HOH A 17 521 521 HOH HOH . 
F 6 HOH A 18 522 522 HOH HOH . 
F 6 HOH A 19 523 523 HOH HOH . 
F 6 HOH A 20 524 524 HOH HOH . 
F 6 HOH A 21 525 525 HOH HOH . 
F 6 HOH A 22 526 526 HOH HOH . 
F 6 HOH A 23 527 527 HOH HOH . 
F 6 HOH A 24 528 528 HOH HOH . 
F 6 HOH A 25 529 529 HOH HOH . 
F 6 HOH A 26 530 530 HOH HOH . 
F 6 HOH A 27 531 531 HOH HOH . 
F 6 HOH A 28 532 532 HOH HOH . 
F 6 HOH A 29 533 533 HOH HOH . 
F 6 HOH A 30 534 534 HOH HOH . 
F 6 HOH A 31 535 535 HOH HOH . 
F 6 HOH A 32 536 536 HOH HOH . 
F 6 HOH A 33 537 537 HOH HOH . 
F 6 HOH A 34 538 538 HOH HOH . 
F 6 HOH A 35 539 539 HOH HOH . 
F 6 HOH A 36 540 540 HOH HOH . 
F 6 HOH A 37 541 541 HOH HOH . 
F 6 HOH A 38 542 542 HOH HOH . 
F 6 HOH A 39 543 543 HOH HOH . 
F 6 HOH A 40 544 544 HOH HOH . 
F 6 HOH A 41 545 545 HOH HOH . 
F 6 HOH A 42 546 546 HOH HOH . 
F 6 HOH A 43 547 547 HOH HOH . 
F 6 HOH A 44 548 548 HOH HOH . 
F 6 HOH A 45 549 549 HOH HOH . 
F 6 HOH A 46 550 550 HOH HOH . 
F 6 HOH A 47 551 551 HOH HOH . 
F 6 HOH A 48 552 552 HOH HOH . 
F 6 HOH A 49 553 553 HOH HOH . 
F 6 HOH A 50 554 554 HOH HOH . 
F 6 HOH A 51 555 555 HOH HOH . 
F 6 HOH A 52 556 556 HOH HOH . 
F 6 HOH A 53 557 557 HOH HOH . 
F 6 HOH A 54 558 558 HOH HOH . 
F 6 HOH A 55 559 559 HOH HOH . 
F 6 HOH A 56 560 560 HOH HOH . 
F 6 HOH A 57 561 561 HOH HOH . 
F 6 HOH A 58 562 562 HOH HOH . 
F 6 HOH A 59 563 563 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O1 2PE . . . B 2 23.258 4.314 -0.352 1 44.87 ? O1 2PE 501 A 1 
HETATM 2 C C2 2PE . . . B 2 22.072 4.858 -0.932 1 46 ? C2 2PE 501 A 1 
HETATM 3 C C3 2PE . . . B 2 21.654 6.084 -0.139 1 43.99 ? C3 2PE 501 A 1 
HETATM 4 O O4 2PE . . . B 2 20.768 5.465 0.756 1 44 ? O4 2PE 501 A 1 
HETATM 5 C C5 2PE . . . B 2 20.034 6.397 1.504 1 43.86 ? C5 2PE 501 A 1 
HETATM 6 C C6 2PE . . . B 2 19.194 5.528 2.436 1 44.03 ? C6 2PE 501 A 1 
HETATM 7 O O7 2PE . . . B 2 20.158 5.146 3.458 1 42.96 ? O7 2PE 501 A 1 
HETATM 8 C C8 2PE . . . B 2 19.457 4.961 4.679 1 46.63 ? C8 2PE 501 A 1 
HETATM 9 C C9 2PE . . . B 2 18.865 3.571 4.717 1 47.41 ? C9 2PE 501 A 1 
HETATM 10 O O10 2PE . . . B 2 19.995 2.671 4.922 1 51.13 ? O10 2PE 501 A 1 
HETATM 11 C C11 2PE . . . B 2 19.52 1.286 4.948 1 50.35 ? C11 2PE 501 A 1 
HETATM 12 C C12 2PE . . . B 2 20.508 0.463 4.116 1 52.47 ? C12 2PE 501 A 1 
HETATM 13 O O13 2PE . . . B 2 21.78 0.504 4.781 1 54.44 ? O13 2PE 501 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           21 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           292 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           13 
#