data_3H9K # _model_server_result.job_id QH96ZhoC6GH0cOjgJImkww _model_server_result.datetime_utc '2024-11-27 15:02:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3h9k # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":365}' # _entry.id 3H9K # _exptl.entry_id 3H9K _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 115.18 _cell.angle_gamma 90 _cell.entry_id 3H9K _cell.length_a 200.284 _cell.length_b 122.19 _cell.length_c 99.828 _cell.Z_PDB 20 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3H9K _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA dimeric 2 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,F,G,H,I,M,N 1 1 C,J,O 2 1,2 D,E,K,L,P,Q 3 1 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_556 -x,y,-z+1 -1 0 0 0 1 0 0 0 -1 -42.473162 0 90.341906 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 J N N ? 4 L N N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 269 n n P O2 PO4 sing 270 n n P O3 PO4 sing 271 n n P O4 PO4 sing 272 n n # _atom_sites.entry_id 3H9K _atom_sites.fract_transf_matrix[1][1] 0.004993 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002347 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008184 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011069 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 2 UFP A 1 400 400 UFP UFP . G 3 EDO A 1 401 401 EDO EDO . H 2 UFP B 1 400 400 UFP UFP . I 3 EDO B 1 401 401 EDO EDO . J 4 PO4 C 1 365 365 PO4 PO4 . K 2 UFP D 1 565 565 UFP UFP . L 4 PO4 D 1 616 616 PO4 PO4 . M 5 HOH A 1 314 2 HOH HOH . M 5 HOH A 2 315 6 HOH HOH . M 5 HOH A 3 316 13 HOH HOH . M 5 HOH A 4 317 15 HOH HOH . M 5 HOH A 5 318 17 HOH HOH . M 5 HOH A 6 319 20 HOH HOH . M 5 HOH A 7 320 21 HOH HOH . M 5 HOH A 8 321 23 HOH HOH . M 5 HOH A 9 322 24 HOH HOH . M 5 HOH A 10 323 39 HOH HOH . M 5 HOH A 11 324 47 HOH HOH . M 5 HOH A 12 325 55 HOH HOH . N 5 HOH B 1 314 3 HOH HOH . N 5 HOH B 2 315 4 HOH HOH . N 5 HOH B 3 316 7 HOH HOH . N 5 HOH B 4 317 12 HOH HOH . N 5 HOH B 5 318 14 HOH HOH . N 5 HOH B 6 319 18 HOH HOH . N 5 HOH B 7 320 22 HOH HOH . N 5 HOH B 8 321 25 HOH HOH . N 5 HOH B 9 322 27 HOH HOH . N 5 HOH B 10 323 34 HOH HOH . O 5 HOH C 1 314 5 HOH HOH . O 5 HOH C 2 315 9 HOH HOH . O 5 HOH C 3 316 10 HOH HOH . O 5 HOH C 4 317 28 HOH HOH . O 5 HOH C 5 318 31 HOH HOH . O 5 HOH C 6 319 33 HOH HOH . O 5 HOH C 7 320 35 HOH HOH . O 5 HOH C 8 321 36 HOH HOH . O 5 HOH C 9 322 41 HOH HOH . O 5 HOH C 10 323 42 HOH HOH . O 5 HOH C 11 324 54 HOH HOH . O 5 HOH C 12 325 57 HOH HOH . P 5 HOH D 1 314 8 HOH HOH . P 5 HOH D 2 315 16 HOH HOH . P 5 HOH D 3 316 43 HOH HOH . P 5 HOH D 4 317 58 HOH HOH . P 5 HOH D 5 318 59 HOH HOH . P 5 HOH D 6 319 60 HOH HOH . Q 5 HOH E 1 314 1 HOH HOH . Q 5 HOH E 2 315 11 HOH HOH . Q 5 HOH E 3 316 19 HOH HOH . Q 5 HOH E 4 317 26 HOH HOH . Q 5 HOH E 5 318 29 HOH HOH . Q 5 HOH E 6 319 40 HOH HOH . Q 5 HOH E 7 320 44 HOH HOH . Q 5 HOH E 8 321 45 HOH HOH . Q 5 HOH E 9 322 48 HOH HOH . Q 5 HOH E 10 323 51 HOH HOH . Q 5 HOH E 11 324 61 HOH HOH . Q 5 HOH E 12 325 62 HOH HOH . Q 5 HOH E 13 326 63 HOH HOH . Q 5 HOH E 14 327 64 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . J 4 -12.826 -76.589 31.45 1 101.81 ? P PO4 365 C 1 HETATM 2 O O1 PO4 . . . J 4 -12.144 -77.768 32.051 1 99.27 ? O1 PO4 365 C 1 HETATM 3 O O2 PO4 . . . J 4 -14.215 -76.505 31.967 1 100.94 ? O2 PO4 365 C 1 HETATM 4 O O3 PO4 . . . J 4 -12.856 -76.735 29.971 1 102.82 ? O3 PO4 365 C 1 HETATM 5 O O4 PO4 . . . J 4 -12.089 -75.349 31.81 1 100.72 ? O4 PO4 365 C 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 37 _model_server_stats.query_time_ms 607 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 5 #