data_3HA8 # _model_server_result.job_id d8EODlI0sNrFzRXNFTuB7A _model_server_result.datetime_utc '2024-10-20 20:41:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ha8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":361}' # _entry.id 3HA8 # _exptl.entry_id 3HA8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 662.738 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N~2~-{4-[6-(3,4-dihydroquinolin-1(2H)-ylcarbonyl)-1H-benzimidazol-1-yl]-6-ethoxy-1,3,5-triazin-2-yl}-3-(2,2-dimethyl-4H-1,3-benzodioxin-6-yl)-N-methyl-L-alaninamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3HA8 _cell.length_a 46.222 _cell.length_b 87.934 _cell.length_c 121.501 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3HA8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C36 H38 N8 O5' _chem_comp.formula_weight 662.738 _chem_comp.id 5JZ _chem_comp.mon_nstd_flag . _chem_comp.name N~2~-{4-[6-(3,4-dihydroquinolin-1(2H)-ylcarbonyl)-1H-benzimidazol-1-yl]-6-ethoxy-1,3,5-triazin-2-yl}-3-(2,2-dimethyl-4H-1,3-benzodioxin-6-yl)-N-methyl-L-alaninamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C4 N41 5JZ sing 1 n n C5 C6 5JZ doub 2 n y C5 C7 5JZ sing 3 n y C6 C8 5JZ sing 4 n y C7 C23 5JZ doub 5 n y C8 C25 5JZ doub 6 n y C10 C22 5JZ doub 7 n y C10 C11 5JZ sing 8 n y C10 C33 5JZ sing 9 n n C13 C21 5JZ doub 10 n y C13 C27 5JZ sing 11 n y C15 N37 5JZ doub 12 n y C15 N43 5JZ sing 13 n y C17 C16 5JZ sing 14 n n C17 C23 5JZ sing 15 n n C20 C21 5JZ sing 16 n n C20 C36 5JZ sing 17 n n C21 C9 5JZ sing 18 n y C22 C14 5JZ sing 19 n y C24 C28 5JZ sing 20 n y C24 C11 5JZ doub 21 n y C24 N43 5JZ sing 22 n y C26 C12 5JZ sing 23 n y C26 C27 5JZ doub 24 n y C26 O49 5JZ sing 25 n n C28 C14 5JZ doub 26 n y C28 N37 5JZ sing 27 n y C32 C1 5JZ sing 28 n n C2 C35 5JZ sing 29 n n C3 C35 5JZ sing 30 n n C9 C12 5JZ doub 31 n y C16 C18 5JZ sing 32 n n C18 N44 5JZ sing 33 n n C19 C27 5JZ sing 34 n n C19 O48 5JZ sing 35 n n C1 O45 5JZ sing 36 n n C23 C25 5JZ sing 37 n y C25 N44 5JZ sing 38 n n C30 N40 5JZ doub 39 n y C30 N38 5JZ sing 40 n y C30 N42 5JZ sing 41 n n C31 N40 5JZ sing 42 n y C31 N39 5JZ doub 43 n y C31 N43 5JZ sing 44 n y C29 N38 5JZ doub 45 n y C29 N39 5JZ sing 46 n y C29 O45 5JZ sing 47 n n C36 C34 5JZ sing 48 n n C36 N42 5JZ sing 49 n n C33 N44 5JZ sing 50 n n C33 O46 5JZ doub 51 n n C34 N41 5JZ sing 52 n n C34 O47 5JZ doub 53 n n C35 O48 5JZ sing 54 n n C35 O49 5JZ sing 55 n n C4 H4 5JZ sing 56 n n C4 H4A 5JZ sing 57 n n C4 H4B 5JZ sing 58 n n C5 H5 5JZ sing 59 n n C6 H6 5JZ sing 60 n n C7 H7 5JZ sing 61 n n C8 H8 5JZ sing 62 n n C13 H13 5JZ sing 63 n n C15 H15 5JZ sing 64 n n C17 H17 5JZ sing 65 n n C17 H17A 5JZ sing 66 n n C20 H20 5JZ sing 67 n n C20 H20A 5JZ sing 68 n n C22 H22 5JZ sing 69 n n C32 H32 5JZ sing 70 n n C32 H32A 5JZ sing 71 n n C32 H32B 5JZ sing 72 n n C2 H2 5JZ sing 73 n n C2 H2A 5JZ sing 74 n n C2 H2B 5JZ sing 75 n n C3 H3 5JZ sing 76 n n C3 H3A 5JZ sing 77 n n C3 H3B 5JZ sing 78 n n C9 H9 5JZ sing 79 n n C14 H14 5JZ sing 80 n n C12 H12 5JZ sing 81 n n C11 H11 5JZ sing 82 n n C16 H16 5JZ sing 83 n n C16 H16A 5JZ sing 84 n n C18 H18 5JZ sing 85 n n C18 H18A 5JZ sing 86 n n C19 H19 5JZ sing 87 n n C19 H19A 5JZ sing 88 n n C1 H1 5JZ sing 89 n n C1 H1A 5JZ sing 90 n n C36 H36 5JZ sing 91 n n N41 HN41 5JZ sing 92 n n N42 HN42 5JZ sing 93 n n # _atom_sites.entry_id 3HA8 _atom_sites.fract_transf_matrix[1][1] 0.021635 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011372 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00823 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 5JZ A 1 361 1 5JZ 5JZ . C 3 HOH A 1 362 1 HOH HOH . C 3 HOH A 2 363 2 HOH HOH . C 3 HOH A 3 364 3 HOH HOH . C 3 HOH A 4 365 4 HOH HOH . C 3 HOH A 5 366 5 HOH HOH . C 3 HOH A 6 367 6 HOH HOH . C 3 HOH A 7 368 7 HOH HOH . C 3 HOH A 8 369 8 HOH HOH . C 3 HOH A 9 370 9 HOH HOH . C 3 HOH A 10 371 10 HOH HOH . C 3 HOH A 11 372 11 HOH HOH . C 3 HOH A 12 373 12 HOH HOH . C 3 HOH A 13 374 14 HOH HOH . C 3 HOH A 14 375 15 HOH HOH . C 3 HOH A 15 376 16 HOH HOH . C 3 HOH A 16 377 18 HOH HOH . C 3 HOH A 17 378 19 HOH HOH . C 3 HOH A 18 379 20 HOH HOH . C 3 HOH A 19 380 21 HOH HOH . C 3 HOH A 20 381 22 HOH HOH . C 3 HOH A 21 382 24 HOH HOH . C 3 HOH A 22 383 25 HOH HOH . C 3 HOH A 23 384 26 HOH HOH . C 3 HOH A 24 385 27 HOH HOH . C 3 HOH A 25 386 28 HOH HOH . C 3 HOH A 26 387 29 HOH HOH . C 3 HOH A 27 388 31 HOH HOH . C 3 HOH A 28 389 32 HOH HOH . C 3 HOH A 29 390 33 HOH HOH . C 3 HOH A 30 391 34 HOH HOH . C 3 HOH A 31 392 35 HOH HOH . C 3 HOH A 32 393 36 HOH HOH . C 3 HOH A 33 394 37 HOH HOH . C 3 HOH A 34 395 39 HOH HOH . C 3 HOH A 35 396 40 HOH HOH . C 3 HOH A 36 397 41 HOH HOH . C 3 HOH A 37 398 42 HOH HOH . C 3 HOH A 38 399 43 HOH HOH . C 3 HOH A 39 400 44 HOH HOH . C 3 HOH A 40 401 45 HOH HOH . C 3 HOH A 41 402 47 HOH HOH . C 3 HOH A 42 403 48 HOH HOH . C 3 HOH A 43 404 49 HOH HOH . C 3 HOH A 44 405 50 HOH HOH . C 3 HOH A 45 406 51 HOH HOH . C 3 HOH A 46 407 52 HOH HOH . C 3 HOH A 47 408 54 HOH HOH . C 3 HOH A 48 409 55 HOH HOH . C 3 HOH A 49 410 56 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 5JZ . . . B 2 -5.191 5.917 23.695 1 46.51 ? C4 5JZ 361 A 1 HETATM 2 C C5 5JZ . . . B 2 7.338 11.024 28.432 1 45.81 ? C5 5JZ 361 A 1 HETATM 3 C C6 5JZ . . . B 2 6.165 11.146 27.717 1 45.79 ? C6 5JZ 361 A 1 HETATM 4 C C7 5JZ . . . B 2 7.518 11.721 29.604 1 45.17 ? C7 5JZ 361 A 1 HETATM 5 C C8 5JZ . . . B 2 5.162 11.972 28.174 1 45.98 ? C8 5JZ 361 A 1 HETATM 6 C C10 5JZ . . . B 2 2.367 12.114 29.569 1 47.2 ? C10 5JZ 361 A 1 HETATM 7 C C13 5JZ . . . B 2 -4.366 9.641 28.84 1 45.85 ? C13 5JZ 361 A 1 HETATM 8 C C15 5JZ . . . B 2 -0.442 8.895 28.288 1 46.55 ? C15 5JZ 361 A 1 HETATM 9 C C17 5JZ . . . B 2 6.668 13.314 31.325 1 45.87 ? C17 5JZ 361 A 1 HETATM 10 C C20 5JZ . . . B 2 -5.695 9.144 26.79 1 45.86 ? C20 5JZ 361 A 1 HETATM 11 C C21 5JZ . . . B 2 -5.25 10.07 27.873 1 45.86 ? C21 5JZ 361 A 1 HETATM 12 C C22 5JZ . . . B 2 2.777 11.106 30.422 1 46.48 ? C22 5JZ 361 A 1 HETATM 13 C C24 5JZ . . . B 2 0.757 10.71 28.637 1 47.1 ? C24 5JZ 361 A 1 HETATM 14 C C26 5JZ . . . B 2 -4.42 11.792 29.854 1 46.04 ? C26 5JZ 361 A 1 HETATM 15 C C28 5JZ . . . B 2 1.152 9.683 29.478 1 46.9 ? C28 5JZ 361 A 1 HETATM 16 C C32 5JZ . . . B 2 0.16 15.475 26.118 1 49.14 ? C32 5JZ 361 A 1 HETATM 17 C C2 5JZ . . . B 2 -2.729 13.171 32.718 1 44.81 ? C2 5JZ 361 A 1 HETATM 18 C C3 5JZ . . . B 2 -1.632 12.636 30.629 1 45.76 ? C3 5JZ 361 A 1 HETATM 19 C C9 5JZ . . . B 2 -5.714 11.366 27.902 1 45.26 ? C9 5JZ 361 A 1 HETATM 20 C C14 5JZ . . . B 2 2.178 9.863 30.394 1 46.45 ? C14 5JZ 361 A 1 HETATM 21 C C12 5JZ . . . B 2 -5.304 12.228 28.893 1 45.36 ? C12 5JZ 361 A 1 HETATM 22 C C11 5JZ . . . B 2 1.347 11.957 28.65 1 46.71 ? C11 5JZ 361 A 1 HETATM 23 C C16 5JZ . . . B 2 6.184 14.729 31.109 1 45.39 ? C16 5JZ 361 A 1 HETATM 24 C C18 5JZ . . . B 2 4.82 14.783 30.455 1 46.04 ? C18 5JZ 361 A 1 HETATM 25 C C19 5JZ . . . B 2 -2.99 10.006 30.863 1 45.57 ? C19 5JZ 361 A 1 HETATM 26 C C1 5JZ . . . B 2 -1.08 14.723 26.538 1 48.67 ? C1 5JZ 361 A 1 HETATM 27 C C23 5JZ . . . B 2 6.512 12.543 30.061 1 45.78 ? C23 5JZ 361 A 1 HETATM 28 C C25 5JZ . . . B 2 5.339 12.667 29.351 1 45.9 ? C25 5JZ 361 A 1 HETATM 29 C C27 5JZ . . . B 2 -3.946 10.496 29.834 1 46.07 ? C27 5JZ 361 A 1 HETATM 30 C C30 5JZ . . . B 2 -3.039 10.847 25.753 1 45.99 ? C30 5JZ 361 A 1 HETATM 31 C C31 5JZ . . . B 2 -1.141 10.868 27.011 1 46.97 ? C31 5JZ 361 A 1 HETATM 32 C C29 5JZ . . . B 2 -1.717 12.678 25.845 1 46.81 ? C29 5JZ 361 A 1 HETATM 33 C C36 5JZ . . . B 2 -4.579 8.973 25.777 1 46.61 ? C36 5JZ 361 A 1 HETATM 34 C C33 5JZ . . . B 2 3.009 13.443 29.606 1 46.96 ? C33 5JZ 361 A 1 HETATM 35 C C34 5JZ . . . B 2 -5.114 8.185 24.617 1 47.27 ? C34 5JZ 361 A 1 HETATM 36 C C35 5JZ . . . B 2 -2.841 12.316 31.481 1 45.49 ? C35 5JZ 361 A 1 HETATM 37 N N37 5JZ . . . B 2 0.395 8.564 29.246 1 47.03 ? N37 5JZ 361 A 1 HETATM 38 N N40 5JZ . . . B 2 -2.218 10.192 26.586 1 46.84 ? N40 5JZ 361 A 1 HETATM 39 N N38 5JZ . . . B 2 -2.816 12.102 25.359 1 45.98 ? N38 5JZ 361 A 1 HETATM 40 N N39 5JZ . . . B 2 -0.828 12.124 26.673 1 46.75 ? N39 5JZ 361 A 1 HETATM 41 N N41 5JZ . . . B 2 -4.769 6.858 24.701 1 47.89 ? N41 5JZ 361 A 1 HETATM 42 N N42 5JZ . . . B 2 -4.207 10.265 25.225 1 46.34 ? N42 5JZ 361 A 1 HETATM 43 N N43 5JZ . . . B 2 -0.266 10.187 27.882 1 46.95 ? N43 5JZ 361 A 1 HETATM 44 N N44 5JZ . . . B 2 4.359 13.53 29.885 1 46.68 ? N44 5JZ 361 A 1 HETATM 45 O O46 5JZ . . . B 2 2.31 14.425 29.404 1 47.41 ? O46 5JZ 361 A 1 HETATM 46 O O47 5JZ . . . B 2 -5.758 8.69 23.705 1 47.91 ? O47 5JZ 361 A 1 HETATM 47 O O48 5JZ . . . B 2 -2.849 10.956 31.917 1 46.07 ? O48 5JZ 361 A 1 HETATM 48 O O49 5JZ . . . B 2 -4.047 12.712 30.83 1 46.14 ? O49 5JZ 361 A 1 HETATM 49 O O45 5JZ . . . B 2 -1.514 13.975 25.414 1 47.3 ? O45 5JZ 361 A 1 # _model_server_stats.io_time_ms 63 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 256 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 49 #