data_3HB9 # _model_server_result.job_id Ny9lvHSAewr8RZfUs3smhQ _model_server_result.datetime_utc '2024-11-15 06:07:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3hb9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":2000}' # _entry.id 3HB9 # _exptl.entry_id 3HB9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 228.311 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-(HEXAHYDRO-2-OXO-1H-THIENO[3,4-D]IMIDAZOL-6-YL)PENTANAL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 109.65 _cell.angle_gamma 90 _cell.entry_id 3HB9 _cell.length_a 96.566 _cell.length_b 256.763 _cell.length_c 126.485 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3HB9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 H N N ? 2 J N N ? 2 M N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A NZ LYS 1112 A LYS 1144 1_555 E C11 BTI . A BTI 2000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale2 B NZ LYS 1112 B LYS 1144 1_555 H C11 BTI . B BTI 2000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale3 C NZ LYS 1112 C LYS 1144 1_555 J C11 BTI . C BTI 2000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? metalc ? metalc1 C OD1 ASP 542 C ASP 572 1_555 L MN MN . C MN 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.349 ? metalc ? metalc2 D OD1 ASP 542 D ASP 572 1_555 N MN MN . D MN 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.482 ? # _chem_comp.formula 'C10 H16 N2 O2 S' _chem_comp.formula_weight 228.311 _chem_comp.id BTI _chem_comp.mon_nstd_flag . _chem_comp.name 5-(HEXAHYDRO-2-OXO-1H-THIENO[3,4-D]IMIDAZOL-6-YL)PENTANAL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3HB9 _atom_sites.fract_transf_matrix[1][1] 0.010356 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003697 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.003895 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008395 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 BTI A 1 2000 2000 BTI BTI . F 3 ADP A 1 2100 2100 ADP ADP . G 4 MN A 1 2002 2002 MN MN . H 2 BTI B 1 2000 2000 BTI BTI . I 4 MN B 1 2002 2002 MN MN . J 2 BTI C 1 2000 2000 BTI BTI . K 3 ADP C 1 2100 2100 ADP ADP . L 4 MN C 1 2002 2002 MN MN . M 2 BTI C 1 1183 2000 BTI BTI . N 4 MN D 1 2002 2002 MN MN . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C11 BTI . . . E 2 81.895 108.93 40.925 1 53.36 ? C11 BTI 2000 A 1 HETATM 2 O O11 BTI . . . E 2 83.085 109.054 40.683 1 53.25 ? O11 BTI 2000 A 1 HETATM 3 C C10 BTI . . . E 2 81.163 110.01 41.685 1 52.55 ? C10 BTI 2000 A 1 HETATM 4 C C9 BTI . . . E 2 81.917 110.332 42.968 1 51.9 ? C9 BTI 2000 A 1 HETATM 5 C C8 BTI . . . E 2 81.407 109.49 44.128 1 51.25 ? C8 BTI 2000 A 1 HETATM 6 C C7 BTI . . . E 2 82.392 109.537 45.287 1 50.92 ? C7 BTI 2000 A 1 HETATM 7 C C2 BTI . . . E 2 81.79 108.876 46.522 1 50.76 ? C2 BTI 2000 A 1 HETATM 8 S S1 BTI . . . E 2 82.487 109.554 47.995 1 50.22 ? S1 BTI 2000 A 1 HETATM 9 C C6 BTI . . . E 2 82.03 108.138 48.933 1 50.44 ? C6 BTI 2000 A 1 HETATM 10 C C5 BTI . . . E 2 82.149 106.923 48.02 1 50.82 ? C5 BTI 2000 A 1 HETATM 11 N N3 BTI . . . E 2 83.538 106.492 48.099 1 51.37 ? N3 BTI 2000 A 1 HETATM 12 C C3 BTI . . . E 2 84.154 106.615 46.935 1 51.63 ? C3 BTI 2000 A 1 HETATM 13 O O3 BTI . . . E 2 85.419 106.274 46.703 1 52.15 ? O3 BTI 2000 A 1 HETATM 14 N N2 BTI . . . E 2 83.348 107.123 46.025 1 51.34 ? N2 BTI 2000 A 1 HETATM 15 C C4 BTI . . . E 2 82.016 107.367 46.562 1 50.87 ? C4 BTI 2000 A 1 # _model_server_stats.io_time_ms 274 _model_server_stats.parse_time_ms 59 _model_server_stats.create_model_time_ms 190 _model_server_stats.query_time_ms 1233 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 15 #