data_3HB9
#
_model_server_result.job_id            j-Fk2OwU1Rcl2RFZMSBK0A 
_model_server_result.datetime_utc      '2024-11-15 05:49:49' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3hb9 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":2000}' 
#
_entry.id    3HB9 
#
_exptl.entry_id    3HB9 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              228.311 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            5-(HEXAHYDRO-2-OXO-1H-THIENO[3,4-D]IMIDAZOL-6-YL)PENTANAL 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          109.65 
_cell.angle_gamma         90 
_cell.entry_id            3HB9 
_cell.length_a            96.566 
_cell.length_b            256.763 
_cell.length_c            126.485 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3HB9 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 H N N 
? 2 J N N 
? 2 M N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A NZ LYS 1112 A LYS 1144 1_555 E C11 BTI . A BTI 2000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale2 B NZ LYS 1112 B LYS 1144 1_555 H C11 BTI . B BTI 2000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale3 C NZ LYS 1112 C LYS 1144 1_555 J C11 BTI . C BTI 2000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
metalc ? metalc1 C OD1 ASP 542 C ASP 572 1_555 L MN MN . C MN 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.349 ? 
metalc ? metalc2 D OD1 ASP 542 D ASP 572 1_555 N MN MN . D MN 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.482 ? 
#
_chem_comp.formula           'C10 H16 N2 O2 S' 
_chem_comp.formula_weight    228.311 
_chem_comp.id                BTI 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              5-(HEXAHYDRO-2-OXO-1H-THIENO[3,4-D]IMIDAZOL-6-YL)PENTANAL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3HB9 
_atom_sites.fract_transf_matrix[1][1]    0.010356 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003697 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.003895 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008395 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 BTI A 1 2000 2000 BTI BTI . 
F 3 ADP A 1 2100 2100 ADP ADP . 
G 4 MN A 1 2002 2002 MN MN . 
H 2 BTI B 1 2000 2000 BTI BTI . 
I 4 MN B 1 2002 2002 MN MN . 
J 2 BTI C 1 2000 2000 BTI BTI . 
K 3 ADP C 1 2100 2100 ADP ADP . 
L 4 MN C 1 2002 2002 MN MN . 
M 2 BTI C 1 1183 2000 BTI BTI . 
N 4 MN D 1 2002 2002 MN MN . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C11 BTI . . . J 2 54.648 128.5 16.863 1 57.07 ? C11 BTI 2000 C 1 
HETATM 2 O O11 BTI . . . J 2 53.514 128.489 17.317 1 57.52 ? O11 BTI 2000 C 1 
HETATM 3 C C10 BTI . . . J 2 55.691 129.446 17.415 1 54.76 ? C10 BTI 2000 C 1 
HETATM 4 C C9 BTI . . . J 2 55.187 130.884 17.334 1 52.16 ? C9 BTI 2000 C 1 
HETATM 5 C C8 BTI . . . J 2 55.654 131.555 16.049 1 50.06 ? C8 BTI 2000 C 1 
HETATM 6 C C7 BTI . . . J 2 54.683 132.633 15.575 1 47.74 ? C7 BTI 2000 C 1 
HETATM 7 C C2 BTI . . . J 2 55.182 133.247 14.268 1 46.34 ? C2 BTI 2000 C 1 
HETATM 8 S S1 BTI . . . J 2 54.762 134.958 14.169 1 45.13 ? S1 BTI 2000 C 1 
HETATM 9 C C6 BTI . . . J 2 54.999 135 12.426 1 45.21 ? C6 BTI 2000 C 1 
HETATM 10 C C5 BTI . . . J 2 54.587 133.638 11.888 1 45.58 ? C5 BTI 2000 C 1 
HETATM 11 N N3 BTI . . . J 2 53.164 133.759 11.603 1 45.73 ? N3 BTI 2000 C 1 
HETATM 12 C C3 BTI . . . J 2 52.444 133.001 12.406 1 45.53 ? C3 BTI 2000 C 1 
HETATM 13 O O3 BTI . . . J 2 51.12 132.942 12.394 1 45.45 ? O3 BTI 2000 C 1 
HETATM 14 N N2 BTI . . . J 2 53.214 132.315 13.229 1 45.98 ? N2 BTI 2000 C 1 
HETATM 15 C C4 BTI . . . J 2 54.628 132.593 13.008 1 45.84 ? C4 BTI 2000 C 1 
#
_model_server_stats.io_time_ms              66 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    55 
_model_server_stats.query_time_ms           252 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           15 
#