data_3HBD # _model_server_result.job_id J6S5RBM-Qbb64Nc-pQxvHw _model_server_result.datetime_utc '2024-10-20 12:32:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3hbd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":300}' # _entry.id 3HBD # _exptl.entry_id 3HBD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 76.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-METHOXYETHANOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3HBD _cell.length_a 67.004 _cell.length_b 65.579 _cell.length_c 36.481 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3HBD _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 A CYS 69 1_555 A SG CYS 71 A CYS 118 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? disulf ? disulf2 A SG CYS 172 A CYS 219 1_555 A SG CYS 204 A CYS 251 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.632 ? # _chem_comp.formula 'C3 H8 O2' _chem_comp.formula_weight 76.094 _chem_comp.id MXE _chem_comp.mon_nstd_flag . _chem_comp.name 2-METHOXYETHANOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 MXE sing 243 n n O1 HO1 MXE sing 244 n n C1 C2 MXE sing 245 n n C1 H11 MXE sing 246 n n C1 H12 MXE sing 247 n n C2 O2 MXE sing 248 n n C2 H21 MXE sing 249 n n C2 H22 MXE sing 250 n n O2 C3 MXE sing 251 n n C3 H31 MXE sing 252 n n C3 H32 MXE sing 253 n n C3 H33 MXE sing 254 n n # _atom_sites.entry_id 3HBD _atom_sites.fract_transf_matrix[1][1] 0.014924 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015249 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.027412 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MXE A 1 300 300 MXE MXE . C 3 ACT A 1 310 310 ACT ACT . D 2 MXE A 1 320 320 MXE MXE . E 4 HOH A 1 1 1 HOH HOH . E 4 HOH A 2 2 2 HOH HOH . E 4 HOH A 3 3 3 HOH HOH . E 4 HOH A 4 4 4 HOH HOH . E 4 HOH A 5 5 5 HOH HOH . E 4 HOH A 6 6 6 HOH HOH . E 4 HOH A 7 7 7 HOH HOH . E 4 HOH A 8 8 8 HOH HOH . E 4 HOH A 9 9 9 HOH HOH . E 4 HOH A 10 10 10 HOH HOH . E 4 HOH A 11 11 11 HOH HOH . E 4 HOH A 12 12 12 HOH HOH . E 4 HOH A 13 13 13 HOH HOH . E 4 HOH A 14 14 14 HOH HOH . E 4 HOH A 15 15 15 HOH HOH . E 4 HOH A 16 16 16 HOH HOH . E 4 HOH A 17 17 17 HOH HOH . E 4 HOH A 18 18 18 HOH HOH . E 4 HOH A 19 19 19 HOH HOH . E 4 HOH A 20 20 20 HOH HOH . E 4 HOH A 21 21 21 HOH HOH . E 4 HOH A 22 22 22 HOH HOH . E 4 HOH A 23 23 23 HOH HOH . E 4 HOH A 24 24 24 HOH HOH . E 4 HOH A 25 25 25 HOH HOH . E 4 HOH A 26 26 26 HOH HOH . E 4 HOH A 27 27 27 HOH HOH . E 4 HOH A 28 28 28 HOH HOH . E 4 HOH A 29 29 29 HOH HOH . E 4 HOH A 30 30 30 HOH HOH . E 4 HOH A 31 31 31 HOH HOH . E 4 HOH A 32 32 32 HOH HOH . E 4 HOH A 33 33 33 HOH HOH . E 4 HOH A 34 34 34 HOH HOH . E 4 HOH A 35 35 35 HOH HOH . E 4 HOH A 36 36 36 HOH HOH . E 4 HOH A 37 37 37 HOH HOH . E 4 HOH A 38 38 38 HOH HOH . E 4 HOH A 39 39 39 HOH HOH . E 4 HOH A 40 40 40 HOH HOH . E 4 HOH A 41 41 41 HOH HOH . E 4 HOH A 42 42 42 HOH HOH . E 4 HOH A 43 43 43 HOH HOH . E 4 HOH A 44 44 44 HOH HOH . E 4 HOH A 45 45 45 HOH HOH . E 4 HOH A 46 46 46 HOH HOH . E 4 HOH A 47 47 47 HOH HOH . E 4 HOH A 48 252 252 HOH HOH . E 4 HOH A 49 253 253 HOH HOH . E 4 HOH A 50 254 254 HOH HOH . E 4 HOH A 51 255 255 HOH HOH . E 4 HOH A 52 256 256 HOH HOH . E 4 HOH A 53 257 257 HOH HOH . E 4 HOH A 54 258 258 HOH HOH . E 4 HOH A 55 259 259 HOH HOH . E 4 HOH A 56 260 260 HOH HOH . E 4 HOH A 57 261 261 HOH HOH . E 4 HOH A 58 262 262 HOH HOH . E 4 HOH A 59 263 263 HOH HOH . E 4 HOH A 60 264 264 HOH HOH . E 4 HOH A 61 265 265 HOH HOH . E 4 HOH A 62 266 266 HOH HOH . E 4 HOH A 63 267 267 HOH HOH . E 4 HOH A 64 268 268 HOH HOH . E 4 HOH A 65 269 269 HOH HOH . E 4 HOH A 66 270 270 HOH HOH . E 4 HOH A 67 271 271 HOH HOH . E 4 HOH A 68 272 272 HOH HOH . E 4 HOH A 69 273 273 HOH HOH . E 4 HOH A 70 274 274 HOH HOH . E 4 HOH A 71 275 275 HOH HOH . E 4 HOH A 72 276 276 HOH HOH . E 4 HOH A 73 277 277 HOH HOH . E 4 HOH A 74 278 278 HOH HOH . E 4 HOH A 75 279 279 HOH HOH . E 4 HOH A 76 280 280 HOH HOH . E 4 HOH A 77 281 281 HOH HOH . E 4 HOH A 78 282 282 HOH HOH . E 4 HOH A 79 283 283 HOH HOH . E 4 HOH A 80 284 284 HOH HOH . E 4 HOH A 81 285 285 HOH HOH . E 4 HOH A 82 286 286 HOH HOH . E 4 HOH A 83 287 287 HOH HOH . E 4 HOH A 84 288 288 HOH HOH . E 4 HOH A 85 289 289 HOH HOH . E 4 HOH A 86 290 290 HOH HOH . E 4 HOH A 87 291 291 HOH HOH . E 4 HOH A 88 292 292 HOH HOH . E 4 HOH A 89 293 293 HOH HOH . E 4 HOH A 90 294 294 HOH HOH . E 4 HOH A 91 295 295 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 MXE . . . B 2 -10.069 -17.497 -16.936 1 48.63 ? O1 MXE 300 A 1 HETATM 2 C C1 MXE . . . B 2 -10.559 -18.84 -17.042 1 47.7 ? C1 MXE 300 A 1 HETATM 3 C C2 MXE . . . B 2 -10.115 -19.626 -15.817 1 47.86 ? C2 MXE 300 A 1 HETATM 4 O O2 MXE . . . B 2 -8.7 -19.526 -15.654 1 49.74 ? O2 MXE 300 A 1 HETATM 5 C C3 MXE . . . B 2 -8.015 -20.306 -14.635 1 49.14 ? C3 MXE 300 A 1 # _model_server_stats.io_time_ms 54 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 286 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #