data_3HBL # _model_server_result.job_id fWQAtogIEL49yqm79s94Jw _model_server_result.datetime_utc '2025-02-25 04:03:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3hbl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":2000}' # _entry.id 3HBL # _exptl.entry_id 3HBL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 228.311 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-(HEXAHYDRO-2-OXO-1H-THIENO[3,4-D]IMIDAZOL-6-YL)PENTANAL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 114.35 _cell.angle_gamma 90 _cell.entry_id 3HBL _cell.length_a 96.532 _cell.length_b 257.154 _cell.length_c 130.318 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3HBL _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 G N N ? 2 I N N ? 2 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A NZ LYS 1112 A LYS 1144 1_555 E C11 BTI . A BTI 2000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale2 B NZ LYS 1112 B LYS 1144 1_555 G C11 BTI . B BTI 2000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale3 C NZ LYS 1112 C LYS 1144 1_555 I C11 BTI . C BTI 2000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale4 D NZ LYS 1112 D LYS 1144 1_555 L C11 BTI . D BTI 2000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? metalc ? metalc1 A OD1 ASP 542 A ASP 572 1_555 F MN MN . A MN 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.43 ? metalc ? metalc2 C OD1 ASP 542 C ASP 572 1_555 K MN MN . C MN 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.486 ? metalc ? metalc3 D OD1 ASP 542 D ASP 572 1_555 M MN MN . D MN 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? # _chem_comp.formula 'C10 H16 N2 O2 S' _chem_comp.formula_weight 228.311 _chem_comp.id BTI _chem_comp.mon_nstd_flag . _chem_comp.name 5-(HEXAHYDRO-2-OXO-1H-THIENO[3,4-D]IMIDAZOL-6-YL)PENTANAL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3HBL _atom_sites.fract_transf_matrix[1][1] 0.010359 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004688 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.003889 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008423 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 BTI A 1 2000 2000 BTI BTI . F 3 MN A 1 2002 2002 MN MN . G 2 BTI B 1 2000 2000 BTI BTI . H 3 MN B 1 2002 2002 MN MN . I 2 BTI C 1 2000 2000 BTI BTI . J 4 ADP C 1 2100 2100 ADP ADP . K 3 MN C 1 2002 2002 MN MN . L 2 BTI D 1 2000 2000 BTI BTI . M 3 MN D 1 2002 2002 MN MN . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C11 BTI . . . G 2 16.375 3.39 0.531 1 56.41 ? C11 BTI 2000 B 1 HETATM 2 O O11 BTI . . . G 2 15.265 3.221 0.037 1 57.11 ? O11 BTI 2000 B 1 HETATM 3 C C10 BTI . . . G 2 17.267 4.515 0.053 1 55.28 ? C10 BTI 2000 B 1 HETATM 4 C C9 BTI . . . G 2 16.729 5.118 -1.239 1 53.51 ? C9 BTI 2000 B 1 HETATM 5 C C8 BTI . . . G 2 17.293 4.382 -2.441 1 52.17 ? C8 BTI 2000 B 1 HETATM 6 C C7 BTI . . . G 2 16.273 4.359 -3.562 1 51.3 ? C7 BTI 2000 B 1 HETATM 7 C C2 BTI . . . G 2 16.802 3.505 -4.707 1 51.25 ? C2 BTI 2000 B 1 HETATM 8 S S1 BTI . . . G 2 16.583 4.361 -6.237 1 51.52 ? S1 BTI 2000 B 1 HETATM 9 C C6 BTI . . . G 2 16.407 2.884 -7.193 1 50.57 ? C6 BTI 2000 B 1 HETATM 10 C C5 BTI . . . G 2 15.98 1.732 -6.287 1 50.73 ? C5 BTI 2000 B 1 HETATM 11 N N3 BTI . . . G 2 14.537 1.574 -6.44 1 50.43 ? N3 BTI 2000 B 1 HETATM 12 C C3 BTI . . . G 2 13.905 1.872 -5.314 1 51 ? C3 BTI 2000 B 1 HETATM 13 O O3 BTI . . . G 2 12.588 1.814 -5.144 1 51.03 ? O3 BTI 2000 B 1 HETATM 14 N N2 BTI . . . G 2 14.747 2.241 -4.365 1 50.91 ? N2 BTI 2000 B 1 HETATM 15 C C4 BTI . . . G 2 16.134 2.132 -4.812 1 50.94 ? C4 BTI 2000 B 1 # _model_server_stats.io_time_ms 294 _model_server_stats.parse_time_ms 71 _model_server_stats.create_model_time_ms 42 _model_server_stats.query_time_ms 262 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 15 #