data_3HBP
#
_model_server_result.job_id            XM83n-NoQeimUIc3AJZGPA 
_model_server_result.datetime_utc      '2024-10-19 13:19:22' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3hbp 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":502}' 
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_entry.id    3HBP 
#
_exptl.entry_id    3HBP 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              144.946 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            HYDROXY(DIOXO)MOLYBDENUM 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3HBP 
_cell.length_a            86.284 
_cell.length_b            86.284 
_cell.length_c            152.339 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3HBP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        80 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 41' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
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_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 6_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 B S1' MTE . A MTE 501 1_555 C MO1 MOM . A MOM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? 
metalc ? metalc2 B S2' MTE . A MTE 501 1_555 C MO1 MOM . A MOM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.41 ? 
#
_chem_comp.formula           'H Mo O3' 
_chem_comp.formula_weight    144.946 
_chem_comp.id                MOM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              HYDROXY(DIOXO)MOLYBDENUM 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
MO1 OM3 MOM sing 237 n n 
MO1 OM1 MOM doub 238 n n 
MO1 OM2 MOM doub 239 n n 
OM3 HM3 MOM sing 240 n n 
#
_atom_sites.entry_id                     3HBP 
_atom_sites.fract_transf_matrix[1][1]    0.01159 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01159 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006564 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MTE A 1 501 501 MTE MTE . 
C 3 MOM A 1 502 502 MOM MOM . 
D 4 SO3 A 1 1257 1257 SO3 SO3 . 
E 5 HOH A 1 467 1 HOH HOH . 
E 5 HOH A 2 468 2 HOH HOH . 
E 5 HOH A 3 469 3 HOH HOH . 
E 5 HOH A 4 470 1 HOH HOH . 
E 5 HOH A 5 471 2 HOH HOH . 
E 5 HOH A 6 472 4 HOH HOH . 
E 5 HOH A 7 473 5 HOH HOH . 
E 5 HOH A 8 474 6 HOH HOH . 
E 5 HOH A 9 475 7 HOH HOH . 
E 5 HOH A 10 476 8 HOH HOH . 
E 5 HOH A 11 477 9 HOH HOH . 
E 5 HOH A 12 478 10 HOH HOH . 
E 5 HOH A 13 479 11 HOH HOH . 
E 5 HOH A 14 480 12 HOH HOH . 
E 5 HOH A 15 481 13 HOH HOH . 
E 5 HOH A 16 482 14 HOH HOH . 
E 5 HOH A 17 483 15 HOH HOH . 
E 5 HOH A 18 484 16 HOH HOH . 
E 5 HOH A 19 485 17 HOH HOH . 
E 5 HOH A 20 486 18 HOH HOH . 
E 5 HOH A 21 487 19 HOH HOH . 
E 5 HOH A 22 488 20 HOH HOH . 
E 5 HOH A 23 489 21 HOH HOH . 
E 5 HOH A 24 490 22 HOH HOH . 
E 5 HOH A 25 491 23 HOH HOH . 
E 5 HOH A 26 492 24 HOH HOH . 
E 5 HOH A 27 493 25 HOH HOH . 
E 5 HOH A 28 494 26 HOH HOH . 
E 5 HOH A 29 495 27 HOH HOH . 
E 5 HOH A 30 496 28 HOH HOH . 
E 5 HOH A 31 497 29 HOH HOH . 
E 5 HOH A 32 498 30 HOH HOH . 
E 5 HOH A 33 499 31 HOH HOH . 
E 5 HOH A 34 500 32 HOH HOH . 
E 5 HOH A 35 503 33 HOH HOH . 
E 5 HOH A 36 504 34 HOH HOH . 
E 5 HOH A 37 505 35 HOH HOH . 
E 5 HOH A 38 506 36 HOH HOH . 
E 5 HOH A 39 507 37 HOH HOH . 
E 5 HOH A 40 508 38 HOH HOH . 
E 5 HOH A 41 509 39 HOH HOH . 
E 5 HOH A 42 510 40 HOH HOH . 
E 5 HOH A 43 511 41 HOH HOH . 
E 5 HOH A 44 512 42 HOH HOH . 
E 5 HOH A 45 513 43 HOH HOH . 
E 5 HOH A 46 514 44 HOH HOH . 
E 5 HOH A 47 515 45 HOH HOH . 
E 5 HOH A 48 516 46 HOH HOH . 
E 5 HOH A 49 517 47 HOH HOH . 
E 5 HOH A 50 518 48 HOH HOH . 
E 5 HOH A 51 519 49 HOH HOH . 
E 5 HOH A 52 520 50 HOH HOH . 
E 5 HOH A 53 521 51 HOH HOH . 
E 5 HOH A 54 522 52 HOH HOH . 
E 5 HOH A 55 523 53 HOH HOH . 
E 5 HOH A 56 524 54 HOH HOH . 
E 5 HOH A 57 525 55 HOH HOH . 
E 5 HOH A 58 526 56 HOH HOH . 
E 5 HOH A 59 527 57 HOH HOH . 
E 5 HOH A 60 528 58 HOH HOH . 
E 5 HOH A 61 529 59 HOH HOH . 
E 5 HOH A 62 530 60 HOH HOH . 
E 5 HOH A 63 531 61 HOH HOH . 
E 5 HOH A 64 532 62 HOH HOH . 
E 5 HOH A 65 533 63 HOH HOH . 
E 5 HOH A 66 534 64 HOH HOH . 
E 5 HOH A 67 535 65 HOH HOH . 
E 5 HOH A 68 536 66 HOH HOH . 
E 5 HOH A 69 537 67 HOH HOH . 
E 5 HOH A 70 538 68 HOH HOH . 
E 5 HOH A 71 539 69 HOH HOH . 
E 5 HOH A 72 540 70 HOH HOH . 
E 5 HOH A 73 541 71 HOH HOH . 
E 5 HOH A 74 542 72 HOH HOH . 
E 5 HOH A 75 543 73 HOH HOH . 
E 5 HOH A 76 544 74 HOH HOH . 
E 5 HOH A 77 545 75 HOH HOH . 
E 5 HOH A 78 546 76 HOH HOH . 
E 5 HOH A 79 547 77 HOH HOH . 
E 5 HOH A 80 548 78 HOH HOH . 
E 5 HOH A 81 549 79 HOH HOH . 
E 5 HOH A 82 550 80 HOH HOH . 
E 5 HOH A 83 551 81 HOH HOH . 
E 5 HOH A 84 552 82 HOH HOH . 
E 5 HOH A 85 553 83 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 MO MO1 MOM . . . C 3 -18.597 -6.699 37.379 1 36.84 ? MO1 MOM 502 A 1 
HETATM 2 O OM3 MOM . . . C 3 -18.972 -7.727 36.063 0.5 16.41 ? OM3 MOM 502 A 1 
HETATM 3 O OM1 MOM . . . C 3 -16.923 -6.465 37.428 1 17.74 ? OM1 MOM 502 A 1 
HETATM 4 O OM2 MOM . . . C 3 -19.025 -5.597 36.147 1 19.45 ? OM2 MOM 502 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           308 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           4 
#